Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02868 ATGGATAATCCTTCAACCAATAACAAAATTTCCATTACAAGAGAGTCCCTTAATGTAGAGGCTGCTACACAAGGGAACCCTACCTCTATCCTTAAGATGATGGCGGTGGCCTCCATTGCCGCCGGCATCCAATTCGGGTGGGCCCTACAACTCTCCCTGTTGACTCCCTACATCCAATTGTTGGGAGTTCCACACAAGTGGGCTGCCAACATTTGGCTATGTGGTCCAATTTCTGGCATGATTGTTCAGCCACTCGTTGGCTACTACAGTGACCGAAGCACTTCACGTTTCGGTCGTCGTCGCCCCTTCATTTTCTTCGGTGCCATTGCAGTTGCAATTGCAATCTTCCTCATTGGCTATGCAGCCGATCTTGGCCACTCGTTAGGTGATGACTTAACGAAGAAAACACGGCCCCGTGCAGTGGTCATATTTGTTTTGGGCTTCTGGATACTTGATGTCGCAAATAATATGCTCCAGGGACCTTGTCGTGCCTTCATTGGCGACCTCGCCGCAGGTGACCACCGTCGAATGAGAACTGGCAATGGGTTATTCTCGTTCTTCATGGCCGTCGGAAATGTTCTTGGTTATGCTGCTGGCTCCTACAATAAACTCCACGAAAAGTTCCCATTCACACAGACCATAGCTTGTAACGAGTTTTGCGCAAACCTCAAAACATGTTTCTTCTTCTCAATATTCCTCCTTGTCGTACTTTCTACGATCGCTCTACTTTATGTAGAAGACATCCCAATTACATCATCAAAATCACAATCAGAATCGGAACCACAGGTTTCTTCTTTCGGGGAGTTGCTAGGTGCATTCAATGGACTCCAGAAACCGATGTGGTTGCTGATGTTAGTGACAGCCATCAATTGGATTGCATGGTTCCCATTCTTCTTGTTCGACACTGATTGGATGGGTCATGAAGTGTACGGAGGAAATCCAGGAGATGCGGTATACAATAAAGGAGTGCAAGCGGGGGCGTTGGGACTCATGATTAATGCTGTTGTGCTTGGTTTCATGTCGTTGGCGGTGGAACCGTTGGGGCGTTTTTTTGGGGGTGCGAAGAGGTTGTGGGGGGCTGTAAATATCATTCTCGCTATTGGACTCGCAATGACAGTACTCATCACTAGGGCAGCGGAACATGAACGTCACGTTAGTAACGTTGTTGGAAAACCCTCTCACGGTGTTAAGGCTGCCGTATTCTCTTTCTTCGGCATCCTTGGAATCCCTCTTGCGATTAATTTCAGTGTTCCATTTGCTTTAGCATCTATTTATTCTAGCTCATCAGGGGCCGGACAAGGTTTATCTTTGGGAGTCCTCAATATTTCAATTGTGGTTCCACAGATGATAGTATCAGCATTAAGTGGACAATGGGATTCTTTGTTTGGTGGTGGCAACTTGCCGGCATTTGTGGTCGGTGCCGTGGCGGCAGTCATCAGTGCTATATTGGCAATTGTCCTTCTACCTACTCCAAAGCCGGAAGATATGGCCAAGGCTTCCGTTGGAGGTGGTTTTCATTAA 1521 0.4734 MDNPSTNNKISITRESLNVEAATQGNPTSILKMMAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIVQPLVGYYSDRSTSRFGRRRPFIFFGAIAVAIAIFLIGYAADLGHSLGDDLTKKTRPRAVVIFVLGFWILDVANNMLQGPCRAFIGDLAAGDHRRMRTGNGLFSFFMAVGNVLGYAAGSYNKLHEKFPFTQTIACNEFCANLKTCFFFSIFLLVVLSTIALLYVEDIPITSSKSQSESEPQVSSFGELLGAFNGLQKPMWLLMLVTAINWIAWFPFFLFDTDWMGHEVYGGNPGDAVYNKGVQAGALGLMINAVVLGFMSLAVEPLGRFFGGAKRLWGAVNIILAIGLAMTVLITRAAEHERHVSNVVGKPSHGVKAAVFSFFGILGIPLAINFSVPFALASIYSSSSGAGQGLSLGVLNISIVVPQMIVSALSGQWDSLFGGGNLPAFVVGAVAAVISAILAIVLLPTPKPEDMAKASVGGGFH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02868 506 Pfam MFS/sugar transport protein 37 294 - -
Tsu06g02868 506 PANTHER SUGAR TRANSPORTER 15 496 - -
Tsu06g02868 506 CDD MFS_SLC45_SUC 33 485 - -
Tsu06g02868 506 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 496 - -
Tsu06g02868 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 493 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tsu06g02868 506 SUPERFAMILY MFS general substrate transporter 33 494 IPR036259 -
Tsu06g02868 506 Gene3D MFS general substrate transporter like domains 30 488 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02868 Tsu-Chr6 37710687 37713916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02868 5 506 Sucrose Transporter Gene Family AT1G71890 62.157 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02868 K15378 - gmx:100782007 681.789