Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02857 ATGGATTTCTCTCAAAACACAATTGCAATTCTTCTCCTTTCAACAATCATtttcttcataattttattCCTTCActccaaatccaacaaaaccaaacaaccCCCAATGGTTCCTGGTGCATGGCCAATAATTGGCCACCTTCCTCTCTTAAGCAAATCTCAAGCAACTCATCATCTTTTTGGTTCCATGGCTGACAAACTTGGTCCTCTTTTCACCATCAAAATCGGCACAGCAACAACTCTAGTGATCAACAATTGGGAAACCGCGAAAGAATGCTATACAACGAACGACATTGCTTTGTCCTATCGTCCAAACCTCGTTGCATTCGATCACATGACATATAATCATGCCATGGTTGGTTTTGCACCTTACGGTCCCTATTGGCGCGAAATGAGGAAAATTGTTACCTTAAATTTTCTATCAAATCATAGAATCGATCTATTAACTCACCTTCGTGTGTCTGAAGTTCAAACTTCGATCAAAGAACTATTTAACtcttggaaaaataaaaaagacgaAAACGGATATTTATTAGTCGAGATGAAGAAATGGTTTCATGAGTTGGCTTTTAATACCGCGCTTCGAATGGTTGCTGGGAAGAGATATTTTGGTGAGAGTGTTATggtgaaagaagaagaagcgaATCGATGTTTGAATGCTTTGAGAGATTATATGCGTTTGATTAGTGTTTTTCCTATTGCTGATGCTGTTCCATTTTTAAGGTTGTTTGATTTTGGTGGACATGAGAAGAATATGAAGGAAAATTTTAAGGAATTGGATGTTGTTGTGACAGAGTGGTTGGATGAGCATAAGAAGAAGAGGGCTTAtgataagaataaaaaagatcAAGATTTTATGGATGTGATGCTTTCTACTATTGATGGAACAAATATTCATGGATTTGATTCAGATACTATCATCAAAGCCACAGCTATGGCACTGGTTTTGGGAGCAACAGACACTAGCAGTGTTACACACATTTGGGCATTGTGCTTACTATTGAACAACCCTCATGCACTGAAAAAAGTTAAAGAAGAAATCGATCTCCACATCGGCAAAGAGCGACTATGCATTACTGAATCCGATATAAATAAGTTGGTATACCTTCAAGCCGTTGTCAAAGAAACACTAAGGTTGTATCCTGCATCACCACTCTCAGGAATTCGTGAATTTAGAGAAGATTGCAAAATCGGTGGCTACCATGTGAAGAAAGGAACTCGGCTATTCACGAACTTGTGGAAGATCCAAACCGACCCTAGTGTTTGGTCGGATCCATTGGAGTTCAAGCCTGAGAGATTTCTTACTACTCATAAAGATGTTGATGCTAAGGGTCAACATTTTGAGTTCTTACCATTCGGAAGCGGAAGAAGGATTTGTCCTGGAATATCTTTTGGACTTCGAACTGCTTATTTGACTCTTGCAAATTTTCTTCACTcatttgaagttttgaaaacttcTAGTGAGCCTATTGATATGGCTGCTGTTGTGGAAACAACCAACATCAAGGTTACTCCTCTTGAAATTCTCATTAAGCCTCGTTTGGCTCCTAATTATTATGAAACCATGTAA 1569 0.3595 MDFSQNTIAILLLSTIIFFIILFLHSKSNKTKQPPMVPGAWPIIGHLPLLSKSQATHHLFGSMADKLGPLFTIKIGTATTLVINNWETAKECYTTNDIALSYRPNLVAFDHMTYNHAMVGFAPYGPYWREMRKIVTLNFLSNHRIDLLTHLRVSEVQTSIKELFNSWKNKKDENGYLLVEMKKWFHELAFNTALRMVAGKRYFGESVMVKEEEANRCLNALRDYMRLISVFPIADAVPFLRLFDFGGHEKNMKENFKELDVVVTEWLDEHKKKRAYDKNKKDQDFMDVMLSTIDGTNIHGFDSDTIIKATAMALVLGATDTSSVTHIWALCLLLNNPHALKKVKEEIDLHIGKERLCITESDINKLVYLQAVVKETLRLYPASPLSGIREFREDCKIGGYHVKKGTRLFTNLWKIQTDPSVWSDPLEFKPERFLTTHKDVDAKGQHFEFLPFGSGRRICPGISFGLRTAYLTLANFLHSFEVLKTSSEPIDMAAVVETTNIKVTPLEILIKPRLAPNYYETM 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02857 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 Gene3D Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 521 - -
Tsu06g02857 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Tsu06g02857 522 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
Tsu06g02857 522 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02857 522 Pfam Cytochrome P450 35 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02857 Tsu-Chr6 37555442 37558494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02857 1 519 Cytochrome P450 AT4G31970 46.578 6.34e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02857 - - gmx:100802193 744.962