Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02817 ATGGCACCAATATCCTCATCTTCCTTCACATATGGATGGAAATATGATGTGTTTTTAAGCTTCAGAGGCCAAGATATTCGGCATGGTTTTATTGCCTATCTCTACAAAGCACTGTCTGATAGGGGAATTCACAGCTTCATTGATGATGAGGAACTTCAAAGAGGGGAGCATATTATGCCATCACTTGTCAAGGCAATTACAGAGACAAGAATTGCTATCCCTGTGTTCTCTAACAACTATGCTTTTTCGTCATTTTGTTTAGATGAACTTGTTAACATCCTTTCCTTAGTTAAGGAGAAGGGTCGGTTGGTTTTGCCAGTTTTCTATGATGTGGATCCTTCTGATGTGAGACATCAGAGAGGTAGTTATCAAGAAGCAATGGCTAGACATGAGGAACGATTCCAAAATGACAAGGAGAAGGTGCAAAAATGGAGGATAGCTTTGTGTCAAGCAGCTAATTTGTCTGGCTATCATTTCAAACATGGGAATGAGAATGAACATGAGTTTATAGAGAAGATTATTAAAGGGATCTCCAACATTATTAATCGCAATCCTTTGCATATTGCGGATTATCCTGTGGGATTGGAGTCTCGGGTGCAAAAAGTAACCTCGCTTTTAGATGTCGGATCAGATGGAGTCTACATGGTAGGAATCCATGGTATTGGTGGAATTGGTAAAACAACAGTTGCTCGAGCTGTTTATAATTTTATGGCTGATCAATTTGAAGGTTTGTGTTTTCTCGAGAATGTAAGGGAAAATTCAATTAAACACGGATTAGTGCATCTCCAAGAGACACTTCTTTATAATATTCTTGGAAAGAAGGATATTAAGTTAGGAAGTGTCAATGAAGGAATTCCAATAATAAAGCATAGGCTTCACCTAAAGAAGGTTCTTTTGgttcttgatgatgttgacaAACTAGATCAGTTGAGGGCAATAGTTGGAGAGTCTGGTTGGTTTGGTCCTGGCAGCAGAGTTATCATTACAACTCGGGACAAGCATTTGATAACAAGTCACGGGGTTGAAAAAACATATGAGGTAGATGGGTTGAATATGAACGAAGCACTTGAGGTTATTTGTTGGAATGCTTTTAAAACTGACAAAGTTGATTCAAATTATGAGAACGTTTTAAATCGTGCAGTGCATTACGCTTCTGGTCTTCcattggctttggaggtaatgGGTTCCTACTTGGTTAGAAAAAGTATAAAAGAATGGGAATCAGCAATAGATCAGTTTGAAAGAATTCCTGATGAAAATATCCACAACATACTTAAAGTTAGTTTCGTTTGTTTGTCAGAAGATCAGCAAAAAATATTTCTTGATATTGCTTGTTTCTTCAATGGATATGATTTGTCATACATCAAAAAAATACTTCAGATTCATCATGGTTTCTGCCCAGAATATGGTATTGGAGTACTTATAGAAAAATCTCTcataaagataactttgaatgGTCGTGTAATACTGCACGATTTAATAGAGGACATGGGCAAAGAAATTGTTCGACAAGAATCACCGGAGGAGCCTGGAAAACGTAGTAGGTTATGGTTTCATGAGGATATAATTCatgtttttgaagaaaatacTGGAACTAGCCGTGTTCAAGTCATAATTCTGGATTTCCCCAATTTTGAAGAAGTAGTAGAATGGGATGGAAAGGCATTCAAGGAGATGAAAAACCTCAAAACACTTATTATTAGAGTTGGTGGTTTTTCCAAAGGTCCTGACCATCTTCCAAATAGTTTAAGAGTATTGGAATGGTGGGGATATCCATCGCCATCATTACCTTCCAACTTTCATCCGAAGAAACTTGTGATATTGGAGTTGCCGCAAAGTTGCTTAATGTCACTTGACTTGCTTATACCAAAGAAGAAGTTTGTGAACATGAGAGTTCTGAATTTTGATGATTGTGAGTTTATAACAGAGATACCTGATGTGTCTGGTGCTCCAAATATAGAAGAATTATCATTTGGTGattgtaaaaatttaattaaaattcatgAATCAGTTGGACTCTTGAATAAACTTAAAATGTTGAATGCTGATGGCTGTAGCCGGCTTGGGACTTTTCCACCCATAAAGTTGAGCTCTCTTGAAAAACTCAAGCTTTCATCTTGTCAAAGTCTGAAGAGTTTCCCAGAAATATTAGGAAAGATGGAACATATAACGGTACTTGATTTACTCGACACTCCGATAAAAGAACTTCCATTTACAATTCACCATCTTACCCGGCTTGAAAGAGTAGTACTGATTGGCTGTGGAGTTGTTCAGTTACCAAGTAGTATTTTTGTGATGCCAGAACTTCATGAGTTGATTGCTGGGGAATGTACAATGCTATTACCTAAACAGGACAATTTTGAAGCCCAAGCAAGCTCAATGGTCTTAAATTTAGGTCTTTCTAGCTGCCATGTATCAGACAATTTCCTTCGAATTGGTCTCCCCTTGTTTTCTAATGTGAAAGAGTTGTACCTGTCTCAGAATGAATTTACAACTCTTCCTGCATGCATCAAAGAATGTTACTTTCTAACCAAAATTCATTTGGATGGTTGCAAGAATCTCAAAAAAATTTGTGGGGTTCCACTGAACTTGGAAACATTATCGGCAAAATGGTGCACATCCTTGAAAAATTTAGACCTCACACTTCTTCCCAAATGCGTCAAATTATGTCACTTTTTGAAGACACTTATTTTGGATAACTGCcataatcttaaaaaaattcGAGGTGTTCCACCCAACATAAGAACTTTGTCTGCAAGAAACTGCCCTTCCTTGAATTTCTGGTGTAGAAGCGTGTTACATAATGAGAAATTGCACGCGGAGGGCGGTGACAAGGAGTTTCACTTGCCAGAAACATGTATTCCAATGTGGTTCACGCACCATGTCTATGGTCATGATGCATCAATAACTTTCTGGTTTCGTAAAAAGATCCCTGGAATATCATTATGTCTTGTTGTTCGACCCGGAacatatgaagaaattattcaGCCCAGATTTATCATCAATGGAGATAGAAAAACAGATGTATGTGAGAAAATTATCTATGATGGTGATCGTGTGTGCAACAGAGTAGTGGatcatataattatttttgataTAAAGCCGATACCAATTAAATTAACTGATGTTATTTTCGAAAGCGAATGGAATCATGTGTTGTGTACACTATCTGGTTTGCGAAACAAACTTTTCATTGATGAAATTGGAATCAGAGTATTCAAACAAGGAATCAACATGGAGGACATCCGATTCACCAATCCACATTTGCTGAAAGATAAGTATAGATCGAAATATCTGGAAGTCAATAGCAGCATTATGTTTTTGAATAGAGGCCCTACAGTGAAGTTTTTAAATCCCGAAAACTCCATCGACGCTATGAAGGACTGA 3387 0.3617 MAPISSSSFTYGWKYDVFLSFRGQDIRHGFIAYLYKALSDRGIHSFIDDEELQRGEHIMPSLVKAITETRIAIPVFSNNYAFSSFCLDELVNILSLVKEKGRLVLPVFYDVDPSDVRHQRGSYQEAMARHEERFQNDKEKVQKWRIALCQAANLSGYHFKHGNENEHEFIEKIIKGISNIINRNPLHIADYPVGLESRVQKVTSLLDVGSDGVYMVGIHGIGGIGKTTVARAVYNFMADQFEGLCFLENVRENSIKHGLVHLQETLLYNILGKKDIKLGSVNEGIPIIKHRLHLKKVLLVLDDVDKLDQLRAIVGESGWFGPGSRVIITTRDKHLITSHGVEKTYEVDGLNMNEALEVICWNAFKTDKVDSNYENVLNRAVHYASGLPLALEVMGSYLVRKSIKEWESAIDQFERIPDENIHNILKVSFVCLSEDQQKIFLDIACFFNGYDLSYIKKILQIHHGFCPEYGIGVLIEKSLIKITLNGRVILHDLIEDMGKEIVRQESPEEPGKRSRLWFHEDIIHVFEENTGTSRVQVIILDFPNFEEVVEWDGKAFKEMKNLKTLIIRVGGFSKGPDHLPNSLRVLEWWGYPSPSLPSNFHPKKLVILELPQSCLMSLDLLIPKKKFVNMRVLNFDDCEFITEIPDVSGAPNIEELSFGDCKNLIKIHESVGLLNKLKMLNADGCSRLGTFPPIKLSSLEKLKLSSCQSLKSFPEILGKMEHITVLDLLDTPIKELPFTIHHLTRLERVVLIGCGVVQLPSSIFVMPELHELIAGECTMLLPKQDNFEAQASSMVLNLGLSSCHVSDNFLRIGLPLFSNVKELYLSQNEFTTLPACIKECYFLTKIHLDGCKNLKKICGVPLNLETLSAKWCTSLKNLDLTLLPKCVKLCHFLKTLILDNCHNLKKIRGVPPNIRTLSARNCPSLNFWCRSVLHNEKLHAEGGDKEFHLPETCIPMWFTHHVYGHDASITFWFRKKIPGISLCLVVRPGTYEEIIQPRFIINGDRKTDVCEKIIYDGDRVCNRVVDHIIIFDIKPIPIKLTDVIFESEWNHVLCTLSGLRNKLFIDEIGIRVFKQGINMEDIRFTNPHLLKDKYRSKYLEVNSSIMFLNRGPTVKFLNPENSIDAMKD 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02817 1128 Gene3D - 185 343 IPR027417 -
Tsu06g02817 1128 Gene3D Ribonuclease Inhibitor 514 711 IPR032675 -
Tsu06g02817 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Tsu06g02817 1128 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 157 IPR035897 -
Tsu06g02817 1128 Gene3D - 10 184 IPR035897 -
Tsu06g02817 1128 PRINTS Disease resistance protein signature 215 230 - -
Tsu06g02817 1128 PRINTS Disease resistance protein signature 384 398 - -
Tsu06g02817 1128 PRINTS Disease resistance protein signature 694 710 - -
Tsu06g02817 1128 PRINTS Disease resistance protein signature 291 305 - -
Tsu06g02817 1128 Gene3D - 349 432 IPR042197 -
Tsu06g02817 1128 SMART till_3 14 154 IPR000157 GO:0007165
Tsu06g02817 1128 SUPERFAMILY L domain-like 503 929 - -
Tsu06g02817 1128 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 877 IPR044974 GO:0006952
Tsu06g02817 1128 Gene3D Ribonuclease Inhibitor 712 940 IPR032675 -
Tsu06g02817 1128 PANTHER ARCHAEAL ATPASE 870 1052 - -
Tsu06g02817 1128 Pfam NB-ARC domain 196 419 IPR002182 GO:0043531
Tsu06g02817 1128 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 870 1052 IPR044974 GO:0006952
Tsu06g02817 1128 Pfam TIR domain 14 179 IPR000157 GO:0007165
Tsu06g02817 1128 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Tsu06g02817 1128 PANTHER ARCHAEAL ATPASE 25 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02817 Tsu-Chr6 37081910 37087078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02817 9 780 WRKY Transcription Factor Family AT4G12020 29.620 1.81e-84 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02817 - - gmx:121173697 1252.27