Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02721 ATGCTAGGGGACTCAGCAGTGTTAGGAACAGGAGGAGGTAGCTCAGGAGATGGAGGAGCTTACCATGACGGCGGAGAGACGGTGGCAGGTGGTGGTGGATCAATTTCAGGTGATGATGAAAGAGGGGGTGGTAGTAGAAATGAAGAAGGTGGGGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACTCTTGCTTTGTTGAAGATAAGGTCAGATATGGATGTTGCTTTTAGAGATGCAAGTGTCAAAGGTCCCTTATGGGATGAAGTTTCAAGaaaaatggCAGATCTTGGGTATCAAAGAAACTCCAAAAAATGCAAagagaaatttgaaaatgtttacAAATATCACAAGAGAACTAAAGAAGGAAGAGGTGGTAAATCAGATGGTAAAACTTATAGATTTTTTGATCAATTACAAGCACTTGAAAATAACCCTTCAATTCAATCACCAAAACCACAACAATTGAACACAACACCATCACAATCATCTACACCTACAACAACAGTTCCATTGCTATTACCACCCCCATTGTTAAATTCTACACCTCCTATTACTATTCCCACCCCTCCCACCACCACTGTTCCATCAACAACTGCACTTCCAATTCCAATGTCTTACACACAATCCAACCCTACAGATTTTACAGCAATGCCAACACAACCACAAACAACAAACCCTACAAATACAAATAACCCTCTTCCTCAAATTACTATAACACCCCCACCATCTTCATTCCCCAATATTTCAGCAGATTTCTTCTCTAATACAAGCTCGTCTTCAACTTCTTCAGAGGAAACAATGACAATGGAAGGTGGATCGAACCGGCGGAAGAGGAAGAGAAAGTGGAAGGATTTTTATGAGAGGATAATGAAGGAAGTTCTTCAGAAACAAGAGGAGTTGCATAAGAGATTCTTGGAAGCTATtgagaaaagagaaagagaaagatgtGCTAGAGAAGAAGCTTGGAGGGCACAAGAGATGCAAAGGATtaatagagaaagagaaattcTTGCTCAAGAGAGATCTATTGCTGCTGCTAAAGATGCTGCTGTTATGGCGTTTTTGCAAAAGATTGCtgaacaacaagaacaacaacaaaatgttGTTCCTCCTCCATTGAACAACAGCGCCGTTGTTCCTCAGCAACAAGTGCCGCAAGAAACTACACCGGcaccaacaccaacaccaacaccaacagcAAAGCCTTTGCCAACGCCAACACCGACACCATTGCCAATGGCGACACCACAAGTTCAAACTCCAGCGCCATTGCCAATGGCGATACCGGCACCAGTTGTACCTCAGGTTTCACCGTTGCCGCAACAACAGGTACAAGTTCAGCAGCAGCAAGTGACGAATATGGAAATTGTGAAAAGTGACAACAATGGTGGTACCGAGAGTGTGATGCAAGCAAGTTCTTCAAGGTGGCCGAAAACCGAGGTTGAGGCATTGATAAAGCTAAGAACAACTCTTGATATGAAGTACCAAGAAAATGGACCCAAAGGGCCACTATGGGAGGAGATTTCAAGCTTAATGAAGAACTTGGGGTATAATAGAAATGCAAAGAGGTGCAAAGAGAAATGGGAGAATATCAACAAGTATTTCaagaaagtgaaagaaagcaACAAAAAGAGGCCAGAAGATTCAAAGACATGTCCTTATTTTCACCAGCTGGATGCTTTATATAGGGAGAAGAACAAGGGAGAGGGTGCTGCGGTGGCGAGGCCTGAGGGAACGATGATGGCGCCATTGATGGTTCAGCCGGAGCAGCAGTGGCCTCCACAGCagccaccaccaccaacaactaGAGCAGATGTGACCATGGAGGATGCTGAGAAAGACAGGCCGCACCGTGATGAAGAAGCATTTTATGATGATGACGACGAcggtgatgatgaagaagaggaagatgaaggCAGTGATAACTATGAAGTGGTTGCCAACAAACCACCCCCACCTCAATAA 1974 0.3992 MLGDSAVLGTGGGSSGDGGAYHDGGETVAGGGGSISGDDERGGGSRNEEGGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSIQSPKPQQLNTTPSQSSTPTTTVPLLLPPPLLNSTPPITIPTPPTTTVPSTTALPIPMSYTQSNPTDFTAMPTQPQTTNPTNTNNPLPQITITPPPSSFPNISADFFSNTSSSSTSSEETMTMEGGSNRRKRKRKWKDFYERIMKEVLQKQEELHKRFLEAIEKRERERCAREEAWRAQEMQRINREREILAQERSIAAAKDAAVMAFLQKIAEQQEQQQNVVPPPLNNSAVVPQQQVPQETTPAPTPTPTPTAKPLPTPTPTPLPMATPQVQTPAPLPMAIPAPVVPQVSPLPQQQVQVQQQQVTNMEIVKSDNNGGTESVMQASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISSLMKNLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKGEGAAVARPEGTMMAPLMVQPEQQWPPQQPPPPTTRADVTMEDAEKDRPHRDEEAFYDDDDDGDDEEEEDEGSDNYEVVANKPPPPQ 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02721 657 MobiDBLite consensus disorder prediction 626 644 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 41 55 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 590 657 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 372 389 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 258 272 - -
Tsu06g02721 657 PRINTS Proline rich extensin signature 185 201 - -
Tsu06g02721 657 PRINTS Proline rich extensin signature 212 224 - -
Tsu06g02721 657 PRINTS Proline rich extensin signature 224 245 - -
Tsu06g02721 657 PRINTS Proline rich extensin signature 395 420 - -
Tsu06g02721 657 PRINTS Proline rich extensin signature 167 179 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 390 429 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 372 429 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 609 625 - -
Tsu06g02721 657 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 16 650 - -
Tsu06g02721 657 CDD GT1 58 123 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 258 278 - -
Tsu06g02721 657 Gene3D - 479 540 - -
Tsu06g02721 657 Gene3D - 60 121 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 147 171 - -
Tsu06g02721 657 ProSiteProfiles Myb-like domain profile. 58 116 IPR001005 -
Tsu06g02721 657 Coils Coil 297 317 - -
Tsu06g02721 657 Pfam Myb/SANT-like DNA-binding domain 477 564 IPR044822 -
Tsu06g02721 657 Pfam Myb/SANT-like DNA-binding domain 58 144 IPR044822 -
Tsu06g02721 657 ProSiteProfiles Myb-like domain profile. 477 535 IPR001005 -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 147 174 - -
Tsu06g02721 657 PANTHER - 16 650 - -
Tsu06g02721 657 MobiDBLite consensus disorder prediction 1 61 - -
Tsu06g02721 657 CDD GT1 477 542 - -
Tsu06g02721 657 SMART sant 475 537 IPR001005 -
Tsu06g02721 657 SMART sant 56 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02721 Tsu-Chr6 35142622 35146363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02721 455 594 Trihelix Transcription Factor Family AT1G76890 65.000 4.47e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu06g02721 Myb_DNA-bind_4 2.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02721 - - gmx:100804788 577.4