Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02719 ATGGCATCACTCAACCAAACCAAATTTGACCTTGAACaacaacaatcaacaataacAAATCTAGAAGTCGAAACAAAAGATTTCGACTACTCGAAAAGATCACAATGGCTTAGAGCCGCAGTTTTAGGAGCCAACGATGGATTAGTCTCTACAGCTTCACTAATGATGGGAGTCGGCGCAGTGAAGCAAGATATCAAAGTGATGATCTTAACCGGTTTTGCCGGTTTGGTAGCCGGTGCTTGTAGTATGGCGATCGGAGAATTTGTCTCGGTTTATTCACAATTAGACATTGAAGTTGCTCaaatgaaaagagagaaagaaagaggaagacaaatggatgatgatgaagagaAGGAGAGTTTGCCTAATCCATTACAAGCTGCAGCTGCATCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGTGATTATAAGGTGAGACTTGGTGTTGTTGTAGCTGCAGTTAGTTTTGCTTTGGTTGTTTTTGGTTGGTTTGGGGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTGTTTTGAGGGTTTTGGTTGGTGGTTGGGTGGCTATGTCCATCACTTTTGGGCTCACTAAGTTGATCGGCTCAAGCGGACTTTAG 639 0.385 MASLNQTKFDLEQQQSTITNLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGRQMDDDEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFISDYKVRLGVVVAAVSFALVVFGWFGAVLGKAPIFRSVLRVLVGGWVAMSITFGLTKLIGSSGL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02719 212 Pfam VIT family 117 204 IPR008217 GO:0005384|GO:0030026
Tsu06g02719 212 Pfam VIT family 37 117 IPR008217 GO:0005384|GO:0030026
Tsu06g02719 212 CDD Nodulin-21 35 181 - -
Tsu06g02719 212 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 5 209 - -
Tsu06g02719 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 5 209 IPR008217 GO:0005384|GO:0030026
Tsu06g02719 212 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02719 Tsu-Chr6 35111270 35112351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02719 5 212 Nodulin-like Gene Family AT3G43660 68.269 7.26e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02719 K22736 - gmx:100815165 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02719 06 35111270 35112351 Tsu01g04310 01 50902298 50903281 PCT