Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02716 ATGGACCCGAAGTTCATAGGAAAACCACCGCCGGTAATAATTGACTTAGAAAACATGCCGGAGCGTGGCTCCCACCACCGTAGATCACACTCCGATACCACTTTCCGTTTCGCCGCCAACTTGGACGACCTTCTTCTCTTTGACCCATCCGACTTCGACATCTCCAATCTTCCACTACCATCTCCCGTCTCCGACGCTGTTCCGATGACTGTTGATTCGGACGAGTCAAACGGGAAGTCTACTTCGGCGGCGCGTCATCTACGGAGTTTGTCTGTTGATTCTGAGTTTTTTGATGGATTAGGGTTtggtagtggtggtggtggtggtgatggtgggGAGAAAAGTGAAGAGAGGAAGGTGAATCGTCATAGGCATAGTAATTCTATGGATGGTTCTTCAACGACGTCGTTTGATGTTGATGAGAATTCTATGGTGATGATTGATGGTGTGAAGAAATCTATGCCACCTGAGAAACTTGCTGAACTTGCTCTTATTGATCCTAAAAGAGCTAAAagGATTCTCGCTAATAGGCAATCTGCTGCTCGATCGAAGGAGAGGAAAACTCGATATACAAGTGAGCTGGAGAGGAAGGTGCAGACGCTTCAAACTGAAGCAACTAACCTCTCTGCACAACTTACCATCCTTCAGAGAGACACCAATGATTTGACTTCTCAGAATAAGGAGCTCAAGATGAAGTTAGAGGCTTTCGAGCAACAAGCACAGCTTAGAGAAGATCTCAACGAAGCGTTGAAGAAAGAACTGCAACGCCTTAGGGCGCAAAAGAATCATTTGACTGCCATTGCCGGTAATCCTTCTTTCAATGGGATGTTCTCGCAATTTGCTACACAATTAACCATGCAACAGATGAGTAATCCTCAACCCCAGCAGACACAAACAGGCATGCCGTCTTCTCGTTCTGATCATCCTTTCAATGGTCGTGGCCGCCCTAACTTCATGGACTTCAATCACCAGAAGTAG 978 0.4458 MDPKFIGKPPPVIIDLENMPERGSHHRRSHSDTTFRFAANLDDLLLFDPSDFDISNLPLPSPVSDAVPMTVDSDESNGKSTSAARHLRSLSVDSEFFDGLGFGSGGGGGDGGEKSEERKVNRHRHSNSMDGSSTTSFDVDENSMVMIDGVKKSMPPEKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTILQRDTNDLTSQNKELKMKLEAFEQQAQLREDLNEALKKELQRLRAQKNHLTAIAGNPSFNGMFSQFATQLTMQQMSNPQPQQTQTGMPSSRSDHPFNGRGRPNFMDFNHQK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02716 325 MobiDBLite consensus disorder prediction 101 137 - -
Tsu06g02716 325 CDD bZIP_plant_RF2 169 218 IPR044759 GO:0003700|GO:0006355
Tsu06g02716 325 Gene3D - 167 221 - -
Tsu06g02716 325 SMART brlzneu 164 228 IPR004827 GO:0003700|GO:0006355
Tsu06g02716 325 MobiDBLite consensus disorder prediction 287 306 - -
Tsu06g02716 325 SUPERFAMILY Leucine zipper domain 168 224 IPR046347 GO:0003700|GO:0006355
Tsu06g02716 325 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 14 323 - -
Tsu06g02716 325 MobiDBLite consensus disorder prediction 287 325 - -
Tsu06g02716 325 Coils Coil 191 267 - -
Tsu06g02716 325 MobiDBLite consensus disorder prediction 1 31 - -
Tsu06g02716 325 Pfam bZIP transcription factor 168 227 IPR004827 GO:0003700|GO:0006355
Tsu06g02716 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 229 IPR004827 GO:0003700|GO:0006355
Tsu06g02716 325 MobiDBLite consensus disorder prediction 111 126 - -
Tsu06g02716 325 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 14 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02716 Tsu-Chr6 35054343 35059979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02716 12 314 bZIP Transcription Factor Family AT1G43700 48.538 2.93e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu06g02716 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02716 K20557 - gmx:778142 392.504