Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02698 ATGGAAGACTTTTGGGACATGATTTGTGGAGGAAACCCTTTGATTCGTTTTGATTTCGAGGATATGAAGAATCCTTCATCATGCACCAAcaatttgataataatttgCTTTGATTTGTTGTTATTGATCATGTTGTTAGCAGTTTTGATCAAGAACAAGTCCTTGTTGGGACGGTTTTGGGGTTTCATCACAATGGAAGGGCGTTCAAAGTTGCAGCTAGTTTCTTCCTTAACCAATGGTTGCATTGGTTTGTTGCATTTGTCCTTAGGAATTTGGATTTTAGAAGAAAAGTTAAGGAAAAATCTCATTGTTTTTCCTCTTAATTTGTGGCTGCTAGAACTTCTTCATGGATTCACATGGATTTTAGTTACTTTGACTACAAGTCTTGTACTAAAACAACTTCCAAAAGCATGGTTGTGGCTGTGTTCTtttctaatattatttatttcgGGTATTTTTTGTGCATTTTCCTTATCATATGCATTTATAGAAAGAGAATTGTCTATTAAGGTAGCATTAgatgttttatcttttttggGAGCATTTTTGCtaattttttgcacatacaaaGCAAGAAAATGTGAAGAAACTTACATGGAAATTGATGAAAGTTTATATACCCATTTAAATTACCAGCTAAATGAAGTTGATCATGTTAATCATGTAACTCCATTTGCCAAAGCTGGAATCTTTAGTTTGATGTCATTTTGGTGGTTGAATCCGTTGATAAAAATGGGTCAAGAGAAAACACTTCAGGAGGAAGATATGCCGAAGTTGCGTGAGTCTGACCGAGCTGAAAAATGTTATGCATTGTTTATAGATCAACTAAATAGACAGAAGCAGCAGGACAAATCATCACGGTCATTGGTTTTATGGACAATAATTTGGTGTCATCGTAGAGAGATTTTGATAACGGGATTCTTTGCATTACTCAAGGTACTCGCAGTCTCTTCTTGTCCTGTGATTTTGAATGCCTTTATTTTAGTGGCGGAGGGTAATAAAAGTTCGAAATATGAAAGTTATGTATTAGCCATCTCACTTTTATTTACAAAGATTTTAGAATCTCTATCCCAAAGGCAGTGGTATTTTCATGCTAGACTTGTTGGCATGAAAATTAAATCATTACTCATCGCAGCCGTTTATAAGAAACAACTGAGGTTATCCAATGCTGCTAGATCGGTTCACTCTGGTGGTGAGATAATGAATTATGTGAATGTGGATGCTTATAGAATTGGAGAATTTGCGTATTGGTTTCACCATACATGGACAACAGCCCTCCAACTATGTATTTCATTAGTAATTATTTTTCGTGCGGTTGGCCTAGCGACAATTGCATCATTCATGGTAATAGTTTTGACAATGATTTTAAATACTCCATTGGCAAAGTTACAACATAAGTTTCTAAGCAATCTTCTTGTCACACAAGATGATAGGTTGAAGACTAGTTCTGAAGCTCTTGTCAATGTTAAAGTGTTGAAGTTATATGCATGggaaatacattttaaaaatgctATTGAAGGCTTAAGATATGTTGAACTCAAATGGTTATCTTCAGTGTTACTACAAAAAGCATACAATGTCATTCTATTTTGGTTTTCGCCTTTTTTTATCTCTGCTGCAACATTTGGGGCATGTTACTTTTTGAAAGTTCCTTTACATGCAAATAATCTTTTCACCTTTGTTGCAACAATACGCCTTTTGCAAGATCCGATTTCAACCATCCCAGACATTATAGGAGTGATCATTCAAGCAAATATTGCATTTTCGCGGATTGTGAAATTCCTTGATGCACCTGAGCTGCAAAGTTCAAATTTAAGAAAGTGTTGCTTTGATGAGAAGTTAAAGGGCTCAATTTTAATCGAGTCTGCTGAATTTTCATGGGAATATAATATATCGAAGCCGACAATAAGAAACATAGATTTAAAGGTTAGTTATGGACAAAAGATAGCCATTTGTGGTGAAGTTGGCTCAGGTAAATCAACTCTCTTAGCGGCAATTCTCAGAGAAATCCCTAATACTAAGGgaaatATCGAAGTTTATGGCACGTTTGCCTATGTTTCTCAAACAACATGGATACAAACAGGAAcaatacaagaaaatattttgttcGGATCATCTATGGATGTTCAAAGGTATCAAGAAACACTTCATAGGTCTTCACTGATGAAGGACCTTGAGTTGTTTCCATATGGTGATCTAACCGAGATAGGGGAGAGAGGTGTAAATCTAAGCGGGGGTCAAAAGCAGCGAATTCAACTTGCTCGAGCTTTTTATCAGAATGCCGATATATATCTCTTGGACGATCCATTTAGTGCTGTTGATGCACACACTGCCACTAATTTGTTCAATGAATACATATTGGAAGGACTTGCCGGAAAGACAGTCCTTCTTGTGACTCATCAAGTTGACTTTCTCCCTGCATTTGATTATGTTTTGTTGATGTCAAATGGAAAAATCCTACAAGCTGCTCCTTATCATGATCTACTAACCTCTAGCCGAGAATTTACGGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCCGGTCGACTTGTAGATGTTACTTCATCACAAAGACATTCAAGTTCATGTGGTAGAGAGATTAAGAAAACTTTTACGGAGAAGCCATTTAAAGCTTTAAATGGCGATCAATTAATTATGCAAGAAGAGAGGGAACGAGGAGACACGGGGTTGAAGCCATACTTACAATATCTCAATCAGAAAAGAGGCTACATTTACTTCTTTCTCGGTTCTCTTTCTCACCTAATGTTTGTAATTTGCCAGATATTGCAAAACTCGTGGATGGCTTCCCGTGTTGATGATCCTCAAGTCAGCACATTACAATTAGTTGTAATTTACTTGTTGATCGGAGTTAGCTATAATGTTTTCATGATAATCAGAAGTCTTCTTGCTGCTCTATTGGGTTTTCAATCATCAAAACATATATTCTCACAGTTAATGAACTCTCTTTTTCGAGCACCGATGTCTTTTTATGATTCTACACCTTTGGGAAGGATACTTAGTAGGGTTTCATCCGATTTGAGCATTGTGGATCTTGATATCTCATTTAACCTCACTTATGTTGTGGGATCAACTATATGTTGTTACATGGATCTTATCGTTTTAATATCTTTCACTTGGCAAGTCTTGTTTGTCACTATACCAATGGCTTATGTCATTGTAAAGTTGCAGaGACACTACTATGCATGTGCAAAAGAACTTATGCGGATGAATGGAACAACAAAATCCTCTATAGCTAATCATGTAGCTGAAACTTTTGCTGGAGCTATGATAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTCGAAAAGAATCTTAATCTAATTGATGTCAATGCCAGTGCTTTCTTCCACAGTTTTGCTTCAAATGAGTGGTTAATCCAACGAGTAGAAACAGCGTATGCCATTGTTCTTGCCTCTGCGGCACTTTGTATAGCTATGCTTCCATTTGGGACCTTAGCATCTGGATTTATCGGCATGGCCCTTTCTTATGGCCTTTCACTAAATGGTTCCTTAGTATATTCAATTCAAAGCCAATGCATTATGGCAAATTATATAGTATCTGTAGAAAGGATAAACCAATACACTCATATACCAAGTGAGGCTCAAGAAGGAAATCGTCCTCCAGTTAATTGGCCAGTTGTAGGCAAAGTAGAAATACGTGATTTACAGATACGATACAGGCCGAATGAACCACTTGTACTACATGGTATCACATGCACATTTGAAGGAGGGCAGAAAATCGGTATTGTCGGTAGAACAGGCAGTGGAAAATCCACTCTGATAGGTGCTTTGTTTCGTCTTGTGGAGCCGGCGGGTGGAAAAATTATAGTTGATGGCATAGACATCTCATCTATCAGCCTTCATGATTTGAGGTCAAGTTTTGGTATTATACCTCAGGATCCTACCCTTTTCATTGGGACAGTTAGATATAACTTAGATCCTTTATCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTCAAAAGTGTCAGTTGCGAGAGTCTGTCAAAGATAAAAGCGGCTTAGATTCCTCAGGTACGTTTTCGAATTCAATGTTTCAACAAAGCTACTTAATTTCTGCAAGCACATCTTCTGAGAATGGATTAAAATGTTATACAGTTGTCGAAGATGGATCAAACTGGAGCATTGGACAAAGGCAACTATTCTGTTTAGGGCGTGCTCTTTTGAGGCGAAGTAAGATATTGGTGCTTGACGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTTCAGAATATCATTAGAAAAGAGTTTGCTGATTGTACAGTGATAACAGTAGCACACAGGATACCAACTGTGATGAATTGCAATATGGTTCTTTCGATAAGCGACGGAAAGTTGGTTGAGTATGATGAGCCAATGAAGTtaatgaagagagaaaaatcaTTGTTTGGACAACTTGTTAAGGAATATTGGTCTCATTTTCAGTAG 4482 0.3628 MEDFWDMICGGNPLIRFDFEDMKNPSSCTNNLIIICFDLLLLIMLLAVLIKNKSLLGRFWGFITMEGRSKLQLVSSLTNGCIGLLHLSLGIWILEEKLRKNLIVFPLNLWLLELLHGFTWILVTLTTSLVLKQLPKAWLWLCSFLILFISGIFCAFSLSYAFIERELSIKVALDVLSFLGAFLLIFCTYKARKCEETYMEIDESLYTHLNYQLNEVDHVNHVTPFAKAGIFSLMSFWWLNPLIKMGQEKTLQEEDMPKLRESDRAEKCYALFIDQLNRQKQQDKSSRSLVLWTIIWCHRREILITGFFALLKVLAVSSCPVILNAFILVAEGNKSSKYESYVLAISLLFTKILESLSQRQWYFHARLVGMKIKSLLIAAVYKKQLRLSNAARSVHSGGEIMNYVNVDAYRIGEFAYWFHHTWTTALQLCISLVIIFRAVGLATIASFMVIVLTMILNTPLAKLQHKFLSNLLVTQDDRLKTSSEALVNVKVLKLYAWEIHFKNAIEGLRYVELKWLSSVLLQKAYNVILFWFSPFFISAATFGACYFLKVPLHANNLFTFVATIRLLQDPISTIPDIIGVIIQANIAFSRIVKFLDAPELQSSNLRKCCFDEKLKGSILIESAEFSWEYNISKPTIRNIDLKVSYGQKIAICGEVGSGKSTLLAAILREIPNTKGNIEVYGTFAYVSQTTWIQTGTIQENILFGSSMDVQRYQETLHRSSLMKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARAFYQNADIYLLDDPFSAVDAHTATNLFNEYILEGLAGKTVLLVTHQVDFLPAFDYVLLMSNGKILQAAPYHDLLTSSREFTDLVNAHKETAGSGRLVDVTSSQRHSSSCGREIKKTFTEKPFKALNGDQLIMQEERERGDTGLKPYLQYLNQKRGYIYFFLGSLSHLMFVICQILQNSWMASRVDDPQVSTLQLVVIYLLIGVSYNVFMIIRSLLAALLGFQSSKHIFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDISFNLTYVVGSTICCYMDLIVLISFTWQVLFVTIPMAYVIVKLQRHYYACAKELMRMNGTTKSSIANHVAETFAGAMIIRAFEEEDRFFEKNLNLIDVNASAFFHSFASNEWLIQRVETAYAIVLASAALCIAMLPFGTLASGFIGMALSYGLSLNGSLVYSIQSQCIMANYIVSVERINQYTHIPSEAQEGNRPPVNWPVVGKVEIRDLQIRYRPNEPLVLHGITCTFEGGQKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDISSISLHDLRSSFGIIPQDPTLFIGTVRYNLDPLSQHSDQEIWEVLQKCQLRESVKDKSGLDSSGTFSNSMFQQSYLISASTSSENGLKCYTVVEDGSNWSIGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQNIIRKEFADCTVITVAHRIPTVMNCNMVLSISDGKLVEYDEPMKLMKREKSLFGQLVKEYWSHFQ 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02698 1493 CDD ABCC_MRP_domain1 618 818 - -
Tsu06g02698 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 841 IPR003439 GO:0005524
Tsu06g02698 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 303 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02698 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 841 IPR027417 -
Tsu06g02698 1493 Gene3D - 1210 1487 IPR027417 -
Tsu06g02698 1493 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 65 1352 - -
Tsu06g02698 1493 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1367 1493 - -
Tsu06g02698 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1215 1482 IPR027417 -
Tsu06g02698 1493 CDD ABC_6TM_ABCC_D1 304 591 IPR044746 GO:0140359
Tsu06g02698 1493 Pfam ABC transporter transmembrane region 303 570 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02698 1493 Pfam ABC transporter transmembrane region 912 1161 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02698 1493 Pfam ABC transporter 637 770 IPR003439 GO:0005524
Tsu06g02698 1493 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 65 1352 - -
Tsu06g02698 1493 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1367 1493 - -
Tsu06g02698 1493 CDD ABCC_MRP_domain2 1223 1470 - -
Tsu06g02698 1493 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524
Tsu06g02698 1493 Gene3D - 599 857 IPR027417 -
Tsu06g02698 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1486 IPR003439 GO:0005524
Tsu06g02698 1493 Gene3D ABC transporter type 1, transmembrane domain 878 1209 IPR036640 GO:0005524|GO:0016021
Tsu06g02698 1493 Gene3D ABC transporter type 1, transmembrane domain 274 598 IPR036640 GO:0005524|GO:0016021
Tsu06g02698 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 911 1191 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02698 1493 SUPERFAMILY ABC transporter transmembrane region 287 599 IPR036640 GO:0005524|GO:0016021
Tsu06g02698 1493 SMART AAA_5 645 818 IPR003593 -
Tsu06g02698 1493 SMART AAA_5 1251 1461 IPR003593 -
Tsu06g02698 1493 Pfam ABC transporter 1242 1417 IPR003439 GO:0005524
Tsu06g02698 1493 SUPERFAMILY ABC transporter transmembrane region 901 1208 IPR036640 GO:0005524|GO:0016021
Tsu06g02698 1493 CDD ABC_6TM_ABCC_D2 910 1203 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02698 Tsu-Chr6 34776676 34782369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02698 582 829 Calmodulin-binding Proteins AT2G36910 27.985 3.09e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02698 K05666 - gmx:100811468 2091.23