Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02696 ATGCTGATTATGCTGTCATTCATGATGTTCTTGAAATCTTCCTCGAGGCCCTTTTGGAGTCGAGTAAGATATTCAAACTTGCAGCTAGTTTCTGCCATAACCAATGGATCTCTTGGTTTGTTGCATTTATGCTTAGGAATTTGGGTTTTAGAGGAGACATTAAGGAAAACTCATAAAGCCTTTCCTCTTAACTGGTGGTTTCTAGAACTCTTACATGGACTCACATGGTTGTTTGTAAGTTTAACTATAAGTCTTCAGATAAAACAACCTCGAAGAGCATGGTTGTGGCTGTTTTCTATTCTTGTGTTCTTTTCTTCTGCTATATTATGTGTTTTATCTATGTCTTATGCAATTGAAAGAAGAGACTTGCCCCTCAAGGAAGCTTTAGATGTTATATCTCTTCCCGGATCAACTTTGCTTTTGTTATGTACTTACAAAGCATGTAAACGTGAAGATTGCGATGCAGACCGAGAAACTGCTGAAAGGCTTTATGCTCCCTTAAATAGTCAGTTCAATGATGTTCCTCAATGTCACATCACGCCATTTTTCAAAGCTGGATTCTTTAGTAACATATCGTTTTGGTGGTTGAATCCATTGATTAAGAAGGGTCAAGAAAAAACACTTCAAGACGAGGATATCCCAAAGTTAAGAGAGTCCGAACGAGCAGAAAGTTGTTATTCGCAATTTGTAGAACAATTAAGgatacaaagagaaaaagaaccATCATCACATTCATCGGTATTATGGACAATCATAATGTGCCACCGAAGAGAGATTGTGATAACAGGATTCTTTGCTTTGCTCAAGATACTTGCTATATCTTGCGGCCCTTTGCTTCTGAATGCTTTCATATTGGTTTCTGAGGGAATTGGAGAATTTCCATTCTGGTTTCACCAAACATGGACAACAGTCCTCCAATTGTGTATTGCATTAGTAATTCTTTTCCGAGCAATTGGACTAGCAACAATAGCTTCGATGGTTGTGATAGTTCTCACTGTGCTTTGCAACACTCCACTGGCAAAGTTACAACACAAGTTTCAGAGCGAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTAGTTCCGAGGCTCTTGTGAATATGAAAGTGCTAAAGCTATATGCATGGGAAAACCATTTTAAAAATGCTATAGAAAAGTTAAGAAATGCGGAACTCAAATTGATATCTGCAGTGCAATTAAGTAAGGCATaccttctctttttcttttggaCCTCGCCGGTGTTGGTGTCTGCTGCTTCTTTTCTAGCATGTTACTTCCTTAAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTCGTGGCAACTCTACGCCTTGTTCAAGAGCCAATTACAGGTATCCCGGATGTAATTACCGTGATCATTCAAGCAAAAGTTGCTTTTGCTCGGATTTGTAATTTCCTTGAGGCACCAGAACTACAGAATGCAAAGAATAACTGCTTTAAGGACAACCACAAAGGCTCAtcagttttaataaaatcagcTGACTTTTCATGGGAAGGTAATGTATCAAAGCCAACACTAAGAAACATAAATTTGGATGTTAGACGCGGGCAAAAGGTGGCTATTTGTGGCGAAGTTGGCTCAGGCAAATCAACGCTTTTAGCAACAATTCTAGGAGAAGTGCCTAATACAAAGGGAgctATTGGTGTTtatgggaagtttgcatatgtTTCTCAAACAGCATGGATACAAACCGGTACAATAcgagaaaatattttgtttggatCTGAGTTGGATGATCAAAGATATCAAGAAACACTTCAAAGATCTTCATTGTTAACGGACCTCGAGTTGCTTCCCTATGGTGACCTCACTGAAATAGGTGAGAGAGGAGTTAATTTAAGTGGAGGTCAGAAGCAGCGAATTCAACTAGCCCGAGCTCTTTATGAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCCGTTGATGCACATACTGCAAAAAGTTTATTTAATGAATACATCATGGAAGGACTCAAAGGGAAAACTGTCTTACTCGTGACTCATCAAGTCGACTTTCTCCCAgcatttgattttgttttgTTGATGTCAGACGGGGTAATCCTACAAGCCGGACCATATAACCAGCTATTATCCACAAGCCAAGAATTCCAAGACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCAAACCAGCCTGTGAATTTTACTTTTACACAAACTTCTAAAAAGCTTACACAAACTTTCGTCGAAAAGCAGATTAAAGAAACAAATGGAAACCAGTTAATTAAGcaagaagaaagagagaaaggaGATGCAGGGTTGAAGCCTTACTTACAATATATGAATCAGATGAAAGGCTATATATTCTTCATTGTGGCTTCAATTTGTCACCTTATTTTTGTGCTTTGTCAGATATTGCAAAACTCGTGGATGGCTGCTAATGTTGACAATCCCCGCGTCAGCACGTTGAAGTTAATTTTAGTTTACTTCCTAATTGGAGTTTCTTCAGCATTTTTCATGTTAACCAGAAGTCTCTTTATAGTTGCTTTGGGTCTTCAATCTTCAAAGTACTTATTTTTACAGTTGATGAACTCTCTCTTTCGAGCACCAATGTCTTTTTATGACTCTACACCATTGGGAAGGATACTAAGTAGGGTTTCATCTGATCTGAGTATGATTGATGTTGACATTCCATTTAGCCTTGCTTTTTCGGTGGGAGGAACTATGAATTTTTGTTCTAGTCTTGCAGTTTTAGCAGTTGTCACTTGGCAAGTATTGATTATGGCTATACCGATGGTTTGTGTTACAATTCGCTTGCAGcAGAGATACTACGTTGCCGCAGCAAAAGAAGTGATGCGGATGAATGGCACAACAAAATCCTACTTAGCTAATCATGTAGCTGAAACTGTTGCCGGAGCTGTGACAGTACGGGCTTTTGAGGAGGAAGATCGTTTTTTTGAGAAGAATCTTGATCTAATTGACATTAATGCTAGTgcattttttcataattttgcCTCAAACGAGTGGTTGATCCTACGGTTAGAAACAATAAGTGCAGCTCTTCTTTCCTCAGCAGCTCTATGCATGGTCATACTTCCACCAGGGACTTTCACATCTGGATTCATTGGTATGGCTCTATCTTATGGCCTTACACTAAATTCTTCCTTAGTATATTCAATTCAAAGTCAATGCACTATTGCAAGTCAGATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCCGACGAAATTGTCGAAGGGAATCGTCCTCCTTTGAATTGGCCAGTTGCAGGCAAAGTAGAAATACTAGACTTGAAGATACGATACAGGCCCGATGGACCACTTGTTCTTCATGGAATCACATGCATATTTGAAGCAGGTCACAAGATTGGTATTGTTGGCAGAACAGGCAGTGGGAAATCGACTCTTATCAGTGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGAAAAATCACAGTTGATGGAATAGACATCTCATCTATCGGCCTTCATGATTTGAGGTCGCGTTTTGGGATTATACCTCAAGATCCTACCCTTTTTAACGGGACAGTAAGATATAACTTAGACCCGTTATCTCAACACACTGATCAAGAGATATGGGAGGTTCTCGGAAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGACGAGGGCTTAAACTCGTCAGTTGTTGAAGATGGATCGAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTAGGGCGTGCTCTTTTGCGAAGAAGTAGGATATTGGTGTTGGACGAAGCAACTGCTTCAATTGATAATTCTACTGATATGATTCTACAGAAAACCATTAGAACCGAGTTTGCAGATTGTACTGTGATCACAGTAGCACACAGGATACCGACTGTGATGGATTGCACTATGGTTCTTTCAATCAGTGatgGAAAATTGGCGGAGTATGACGAACCAATGAGCTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCGCATTAA 4047 0.3823 MLIMLSFMMFLKSSSRPFWSRVRYSNLQLVSAITNGSLGLLHLCLGIWVLEETLRKTHKAFPLNWWFLELLHGLTWLFVSLTISLQIKQPRRAWLWLFSILVFFSSAILCVLSMSYAIERRDLPLKEALDVISLPGSTLLLLCTYKACKREDCDADRETAERLYAPLNSQFNDVPQCHITPFFKAGFFSNISFWWLNPLIKKGQEKTLQDEDIPKLRESERAESCYSQFVEQLRIQREKEPSSHSSVLWTIIMCHRREIVITGFFALLKILAISCGPLLLNAFILVSEGIGEFPFWFHQTWTTVLQLCIALVILFRAIGLATIASMVVIVLTVLCNTPLAKLQHKFQSELMVAQDERLKASSEALVNMKVLKLYAWENHFKNAIEKLRNAELKLISAVQLSKAYLLFFFWTSPVLVSAASFLACYFLKVPLHASNVFTFVATLRLVQEPITGIPDVITVIIQAKVAFARICNFLEAPELQNAKNNCFKDNHKGSSVLIKSADFSWEGNVSKPTLRNINLDVRRGQKVAICGEVGSGKSTLLATILGEVPNTKGAIGVYGKFAYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLLTDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYENADIYLLDDPFSAVDAHTAKSLFNEYIMEGLKGKTVLLVTHQVDFLPAFDFVLLMSDGVILQAGPYNQLLSTSQEFQDLVNAHKETAGSNQPVNFTFTQTSKKLTQTFVEKQIKETNGNQLIKQEEREKGDAGLKPYLQYMNQMKGYIFFIVASICHLIFVLCQILQNSWMAANVDNPRVSTLKLILVYFLIGVSSAFFMLTRSLFIVALGLQSSKYLFLQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSMIDVDIPFSLAFSVGGTMNFCSSLAVLAVVTWQVLIMAIPMVCVTIRLQQRYYVAAAKEVMRMNGTTKSYLANHVAETVAGAVTVRAFEEEDRFFEKNLDLIDINASAFFHNFASNEWLILRLETISAALLSSAALCMVILPPGTFTSGFIGMALSYGLTLNSSLVYSIQSQCTIASQIISVERLNQYMHIQSEADEIVEGNRPPLNWPVAGKVEILDLKIRYRPDGPLVLHGITCIFEAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKITVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHTDQEIWEVLGKCQLREVVQEKDEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDMILQKTIRTEFADCTVITVAHRIPTVMDCTMVLSISDGKLAEYDEPMSLMKREESLFRKLVKEYWSHFQSAESH 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02696 1348 CDD ABCC_MRP_domain2 1100 1320 - -
Tsu06g02696 1348 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 290 1348 - -
Tsu06g02696 1348 Pfam ABC transporter transmembrane region 295 444 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02696 1348 Pfam ABC transporter transmembrane region 785 1045 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02696 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 719 IPR027417 -
Tsu06g02696 1348 SUPERFAMILY ABC transporter transmembrane region 784 1085 IPR036640 GO:0005524|GO:0016021
Tsu06g02696 1348 Pfam ABC transporter 514 648 IPR003439 GO:0005524
Tsu06g02696 1348 Gene3D - 1086 1337 IPR027417 -
Tsu06g02696 1348 Pfam ABC transporter 1119 1267 IPR003439 GO:0005524
Tsu06g02696 1348 ProSitePatterns ABC transporters family signature. 621 635 IPR017871 GO:0005524
Tsu06g02696 1348 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 788 1065 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02696 1348 CDD ABC_6TM_ABCC_D2 787 1077 IPR044726 GO:0140359
Tsu06g02696 1348 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 498 719 IPR003439 GO:0005524
Tsu06g02696 1348 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 290 1348 - -
Tsu06g02696 1348 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 31 289 - -
Tsu06g02696 1348 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 31 289 - -
Tsu06g02696 1348 CDD ABC_6TM_ABCC_D1 290 470 IPR044746 GO:0140359
Tsu06g02696 1348 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 462 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02696 1348 Gene3D ABC transporter type 1, transmembrane domain 286 483 IPR036640 GO:0005524|GO:0016021
Tsu06g02696 1348 SMART AAA_5 1128 1311 IPR003593 -
Tsu06g02696 1348 SMART AAA_5 523 696 IPR003593 -
Tsu06g02696 1348 Gene3D ABC transporter type 1, transmembrane domain 748 1085 IPR036640 GO:0005524|GO:0016021
Tsu06g02696 1348 Gene3D - 491 725 IPR027417 -
Tsu06g02696 1348 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1102 1336 IPR003439 GO:0005524
Tsu06g02696 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1092 1335 IPR027417 -
Tsu06g02696 1348 CDD ABCC_MRP_domain1 496 695 - -
Tsu06g02696 1348 SUPERFAMILY ABC transporter transmembrane region 293 478 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02696 Tsu-Chr6 34760407 34766618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02696 496 727 Calmodulin-binding Proteins AT2G36910 32.271 5.19e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02696 K05666 - gmx:100787314 1716.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02696 06 34760407 34766618 Tsu01g04343 01 51383987 51390997 PCT