Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02691 ATGGATGATTTTTGGAGCATGATTTGTGGAGACTATGATTGTTCTAAGAATGAAGAAAAGTCTTTATGTTAtgatttaaaacttttgaaagaTCCTTCTTCATGCATCAACCATGTCTTAGTTATATTATTTGATGTGTTAGTGTTAATCATGTTGTTATTCATCATAATCTTAAAGTCTACTTTAAGACCCTATTGGAATCAAGTAAGATATTCCAATTTGCAGATAGTTTCTGCCATAACCAATGGATTTCTTGGTTTGTTGCATTTATCTTTAGGAGTTTGGTTTTTAGAGGAGAGTTTAAGGAAAACTCACAAAGCATTTCCTCTTGATTGGTGGTTTCTAGAACTCTTTCATGGTTTCACTTGGTTGGTTGTAAGTTTAACGCTTAGTCTTCGGATAAAACGAATCGCAAAAGCATCGATGTGGTTTTTTTCTATGCTTATATTCTTTGTTTCTGGTATATTATGTGTTTTATCTATATCTTATGCAATTGATAGTAGTGAATTGTCACCCAAGGTAGGTTTGGATATTATATCATTTCCAGGAGCATCTTTGTTGCTTTTGTGTGCATACAAAAGATGTAAATGTAACGATACTGACAGAGAAATCGATGATAGTCTTTGTACCCCTTTGAATGGCGATTTCAATGATAATAATCTTGCTAGCCATGTTACTCCATTTGCAAAAGCTGGATTAATTAATAAGATGTGGTTTTGGTGGTTGAATTCGTTGATGAAAACGAGTCAAGAGAAAACACTTCAGGACGAGGATATTCCAAACTTGAGAGAGACTGACAGGGCTGAAATTTGTTATGTGTCGTTTATGGAACAGTTAAACAAACAAAGACAATGTGAGACGTCACCTCAGTCATCGGTTTTATGGACAATCGTTTCGTGCTACCGAAGACAGATTTTGGTAACCGGATTCTTTGCTTTGCTTAAGGTACTTGCTATATCTTCCACTCCTTTACTTCTGAATGCCTTTATATTGGTTGCCGAGGGTAATGAAAGTTTCAAATATGAAGGTTATATATTGTCGATATCGCTCTTTCTTATAAAAATCATAGAATCACTATCACAAAGACAATGGTATTTCCAAACTAGACTTGTTGGGATGAAAGTTAGATCACTACTTAATGCAGCCatttataaaaagatattaaGGCTGTCCAATTCTGCGAGAATGATTCATTCTGGTGGCGAGATAATGAATTATATGATCGTGGATGCATATAGAATTGGAGAATTTCCGTTTTGGTTTCACCAGACATGGACAACAACCCTCCAATTATGTATTGCATTAGTAATTCTTTTCCGCACAATTGGATTAGCGACACTAGCATCATTGGCGGTGATAGTTCTTACTGTGATTTGCAATTATCCACTAGCAAAGTTACAGCACAAGTATCAGAGTAAACTTATGGTGGCACAAGATGAGAGATTAAAGGCTAGTTCTGAAGCTCTTGTGAATATGAAAGTGTTGAAGTTATATGCATGGGAAAAACATTTTAAGAATGTCGTAGATTTCTTAAGAAATGCGGAACTTAAATTGTTATATGCAGTGCAATTAAGAAGAACTTACAATATCTTTCTCTTCTGGGCCTCGCCGATGTTGGTGTCTACTGCTTCTTTTCTAGCATGTTACTTGTTGAATGTTCCTTTGAATGCAAGTAACGTTTTCACTTTTGTGGCTACTGTGCGACTTGTTCAAGAGCCAATTACAAATATCCCGGATGTTATTGCAGTGGTCATTCAAGCAAAAGTTGCATTTGCTCGAATTGTTAATTTCCTTGATGCACCAGAACTGCAGGGTGAAAAATCGAAGAACAGGTGCTTCGATGACAACCTCAAAGGCTCAATTTCAATAAAGTCAGCTAACTTTTCATGGGATGGTAATGCATCAAAGGCAACACTAAGGAGCATAAATTTAGAGGTTCGACATGGCCAAAAAGTGGCTATTTGTGGAGAAGTTGGCTCCGGAAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTTCCTAAAACAAAGGGAAATATTGATGTTTATGGGAGATTTGCATATGTTTCTCAAACAGCGTGGATACAAACAGGTACAATTCGGGAAAACATTTTGTTCGGATCTGAGTTGGATGATCAAAGATATCAAGAAACACTTCAAAGGTCTTCATTGATAAAGGACTTTGAGTTGCTTCCCTACGGTGACCTCACTGAAATAGGTGAAAGAGGAGTTAATTTAAGTGGAGGTCAAAAACAACGAATTCAACTTGCTCGAGCTCTTTATCAGAATGCTGATATATATCTGTTAGATGATCCATTTAGTGCTGTTGATGCGCATACTgccaaaaatttgtttaatGAATATATCATGGAAGGACTCAAAGGGAAAACTGTCTTACTTGTGACTCATCAAGTCGACTTCCTCCCAGCGTTTGATTCTGTTTTGtTGATGTCAGATGGGGTTATCCTACAAGCTGGTCCGTATAACGAGCTACTGAACTCAAGCCATGAATTCCAGGACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCTAACCAGCAGCTTGTCGATGTTACTTCTTCTAAGCGATATTCAACTACTAGAAAGGTTACACAAGATATCGTGGAAAAACAGTTTAAAGAAACAAATGGAAATCAATTAATTAAGcaagaagaaagagagaaaggaGATGCAGGATTGAAGCCTTACTTACAATATTTGAATCAGATGAAAGgctatatattattcttgacGGCTTCACTTAGTCACcttctttttgttatttgtcAGATATTGCAAAACTCGTGGATGGCGGCTAATGTTGACAATCCGCTTGTCAGCacattgaaattgattttagtttatTTCGTTATCGGTGCAATTTCGACAGTTTTCTTGTTAACCAGAAGTCTACTTGTAGTTTTTTTAGGTCTTCAatcatcaaaatatttattttcacaGTTGATGAACTCCCTCTTTCGCGCACCTATGTCATTTTACGACTCCACGCCATTGGGAAGGATACTTAGTAGGGTCTCATCGGATTTGAGCATTATGGATCTTGACATTCCATTTAGTCTCACTTTTGCTGTCGGAGGAACAATGTTTTTTTATGCTAGTCTTACAGTTTTGGCAGTTGTAACATGGCAAGTCTTGATTGTGGCTATACCAATGGTTTATGTTGCTATCCGAATGCAGAGATACTATTTTACCTTAGCGAAAGAAGTAATGCGGATAAATGGCACAACTAAATCATCATTAGCTAATCATGTAGCTGAAACTGTTGCGGGAGCTGCAACAATAAGGGCTTTTGAGGAGGAAGATCGTTCTTTTAATAAGAACCTTGATCTAATTGATATTAATGCTAGTGCTTTTTTCCATAGCTTTGCCTCAAATGAATGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTTGTTCTTACTGCTGCAGCACTTTGCATGGTTATGCTCCCCCCTGGAACTTTCACCTCAGGAATTATTGGGATGGCACTATCTTATGGCCTTTCATTAAACAATACATTAgtattttcaattcaaaatcaatGCACTATTGCAAATTACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCCGAAGAAATAGTAGAAGGAAATCGCCCTCCTATGAATTGGCCAGATGCAGGCAAAGTTGAAATAAAAGACTTGAAGATACGATACAGATCCGATGGACCACTTGTACTTCGTGGGATCACATGCACATTTAAAGCAGGGCATAAGATTGGTATTGTTGGAAGAACAGGCAGTGGGAAATCCACTCTTATTAGCGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGAAATATTGCAGTTGATGGAATAGACATCTCATCTATCGGTCTTCATGATTTGAGGTCACGTTTCGGGGTTATACCTCAGGATCCTACCCTCTTTGACGGCACAGTAAGATATAATTTGGACCCTTTATCTCAACACACTGATCAAGACATATGGGAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTTGTACAAGGAAAAGAAGAGGGTTTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTTTGTTTGGGGCGTGCTCTTTTGAGGAGAAGTAGGATATTGGTGTTGGATGAAGCAACTGCTTCGATTGATAATTCTACTGACCTGATTCTGCAAAAAATCATTAGGGCTGAATTTGCAGATTGTACAGTGATCACAGTAGCTCATAGGATACCAACTGTGATGGATTGTAGTATGGTTCTTGCTATAAGTGATGGAAAACTGGCGGAGTATGACGAGCCAATGAGCTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAACTTGTCAAGGAATATTGGAAGTCACAACCTCCACAAGAGCTAAAGTTTCAACATAGTTTAAGCAGAAGCAACAAAGATGGATAA 4467 0.368 MDDFWSMICGDYDCSKNEEKSLCYDLKLLKDPSSCINHVLVILFDVLVLIMLLFIIILKSTLRPYWNQVRYSNLQIVSAITNGFLGLLHLSLGVWFLEESLRKTHKAFPLDWWFLELFHGFTWLVVSLTLSLRIKRIAKASMWFFSMLIFFVSGILCVLSISYAIDSSELSPKVGLDIISFPGASLLLLCAYKRCKCNDTDREIDDSLCTPLNGDFNDNNLASHVTPFAKAGLINKMWFWWLNSLMKTSQEKTLQDEDIPNLRETDRAEICYVSFMEQLNKQRQCETSPQSSVLWTIVSCYRRQILVTGFFALLKVLAISSTPLLLNAFILVAEGNESFKYEGYILSISLFLIKIIESLSQRQWYFQTRLVGMKVRSLLNAAIYKKILRLSNSARMIHSGGEIMNYMIVDAYRIGEFPFWFHQTWTTTLQLCIALVILFRTIGLATLASLAVIVLTVICNYPLAKLQHKYQSKLMVAQDERLKASSEALVNMKVLKLYAWEKHFKNVVDFLRNAELKLLYAVQLRRTYNIFLFWASPMLVSTASFLACYLLNVPLNASNVFTFVATVRLVQEPITNIPDVIAVVIQAKVAFARIVNFLDAPELQGEKSKNRCFDDNLKGSISIKSANFSWDGNASKATLRSINLEVRHGQKVAICGEVGSGKSTLLATILGEVPKTKGNIDVYGRFAYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLIKDFELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFNEYIMEGLKGKTVLLVTHQVDFLPAFDSVLLMSDGVILQAGPYNELLNSSHEFQDLVNAHKETAGSNQQLVDVTSSKRYSTTRKVTQDIVEKQFKETNGNQLIKQEEREKGDAGLKPYLQYLNQMKGYILFLTASLSHLLFVICQILQNSWMAANVDNPLVSTLKLILVYFVIGAISTVFLLTRSLLVVFLGLQSSKYLFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDIPFSLTFAVGGTMFFYASLTVLAVVTWQVLIVAIPMVYVAIRMQRYYFTLAKEVMRINGTTKSSLANHVAETVAGAATIRAFEEEDRSFNKNLDLIDINASAFFHSFASNEWLIQRLETISAVVLTAAALCMVMLPPGTFTSGIIGMALSYGLSLNNTLVFSIQNQCTIANYIISVERLNQYMHIQSEAEEIVEGNRPPMNWPDAGKVEIKDLKIRYRSDGPLVLRGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGNIAVDGIDISSIGLHDLRSRFGVIPQDPTLFDGTVRYNLDPLSQHTDQDIWEVLGKCQLREVVQGKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKIIRAEFADCTVITVAHRIPTVMDCSMVLAISDGKLAEYDEPMSLMKREESLFRKLVKEYWKSQPPQELKFQHSLSRSNKDG 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02691 1488 Pfam ABC transporter 639 773 IPR003439 GO:0005524
Tsu06g02691 1488 Gene3D ABC transporter type 1, transmembrane domain 877 1212 IPR036640 GO:0005524|GO:0016021
Tsu06g02691 1488 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 68 1468 - -
Tsu06g02691 1488 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 68 1468 - -
Tsu06g02691 1488 SUPERFAMILY ABC transporter transmembrane region 913 1212 IPR036640 GO:0005524|GO:0016021
Tsu06g02691 1488 SMART AAA_5 648 821 IPR003593 -
Tsu06g02691 1488 SMART AAA_5 1256 1448 IPR003593 -
Tsu06g02691 1488 Gene3D ABC transporter type 1, transmembrane domain 293 595 IPR036640 GO:0005524|GO:0016021
Tsu06g02691 1488 SUPERFAMILY ABC transporter transmembrane region 294 601 IPR036640 GO:0005524|GO:0016021
Tsu06g02691 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1220 1463 IPR027417 -
Tsu06g02691 1488 CDD ABCC_MRP_domain1 621 820 - -
Tsu06g02691 1488 CDD ABC_6TM_ABCC_D2 912 1205 IPR044726 GO:0140359
Tsu06g02691 1488 Gene3D - 1214 1466 IPR027417 -
Tsu06g02691 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1230 1464 IPR003439 GO:0005524
Tsu06g02691 1488 CDD ABC_6TM_ABCC_D1 307 594 IPR044746 GO:0140359
Tsu06g02691 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 844 IPR003439 GO:0005524
Tsu06g02691 1488 Pfam ABC transporter 1247 1395 IPR003439 GO:0005524
Tsu06g02691 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 844 IPR027417 -
Tsu06g02691 1488 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524
Tsu06g02691 1488 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 586 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02691 1488 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 924 1193 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02691 1488 Pfam ABC transporter transmembrane region 914 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02691 1488 Pfam ABC transporter transmembrane region 306 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu06g02691 1488 Gene3D - 596 869 IPR027417 -
Tsu06g02691 1488 CDD ABCC_MRP_domain2 1228 1448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02691 Tsu-Chr6 34696487 34705419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02691 615 868 Calmodulin-binding Proteins AT2G36910 31.868 3.35e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02691 K05666 - gmx:100787314 2221.05