Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02662 ATGATTGTTTTCAATCACAACGAagaggaaaaacaattttctccCGAGGAAATCTCATCCATGGTATTGGCAAAAATGCGTGAGATTGCAAAAGCTTACCTTGGATCAACAGTGAAAGATGTTGTTATAACCGTTCCTGCTTATTTCAATAACTCACAACGCGAAGCTACTAAAGATGCAGGTATTATTGCAGGCCTCAATGTTATGCAAATAATCAATGAGCCTACAACAGCAGCAATTGCATATGGTCTTTTCTTGAAACCATATAATGTTGGATGTAGACATGTTTTCATTTTTGATTTAGGTGGTGGCACTTTGGATGTGTCTATTCTCACATTTGAGAAAGGCGATATAAAAGTTAAGGCCATTGCTGGAGATACCCACCATGGGGGGGAAGACTTTGATAATTCAATGGTGAACTATTTTGTGACGGAGTTCATGAGGAAGTATAAAATTGACATTAGTGAAGACCCAAAAGCCCTTAGGAGGTTGAAGTCTGATAAAAAGACAAGCAAATTTATACTGGTTgtctgtaacacccaaacccaaatttacataaaattctaa 567 0.3386 MIVFNHNEEEKQFSPEEISSMVLAKMREIAKAYLGSTVKDVVITVPAYFNNSQREATKDAGIIAGLNVMQIINEPTTAAIAYGLFLKPYNVGCRHVFIFDLGGGTLDVSILTFEKGDIKVKAIAGDTHHGGEDFDNSMVNYFVTEFMRKYKIDISEDPKALRRLKSDKKTSKFILVVCNTQTQIYIKF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02662 188 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 1 187 - -
Tsu06g02662 188 Gene3D - 87 129 - -
Tsu06g02662 188 SUPERFAMILY Actin-like ATPase domain 94 186 IPR043129 -
Tsu06g02662 188 Pfam Hsp70 protein 7 186 IPR013126 GO:0005524|GO:0140662
Tsu06g02662 188 Gene3D - 15 86 - -
Tsu06g02662 188 Gene3D - 4 14 - -
Tsu06g02662 188 ProSitePatterns Heat shock hsp70 proteins family signature 2. 98 111 IPR018181 -
Tsu06g02662 188 SUPERFAMILY Actin-like ATPase domain 2 85 IPR043129 -
Tsu06g02662 188 PRINTS 70kDa heat shock protein signature 41 61 - -
Tsu06g02662 188 PRINTS 70kDa heat shock protein signature 104 114 - -
Tsu06g02662 188 Gene3D Actin; Chain A, domain 4 130 186 - -
Tsu06g02662 188 PANTHER HEAT SHOCK PROTEIN 70KDA 1 187 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02662 Tsu-Chr6 34411533 34412099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02662 1 186 Calmodulin-binding Proteins AT3G12580 67.204 7.49e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02662 K03283 - mtr:MTR_1207s0010 245.358