Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02653 ATGAATGATAAGGTAGAGATCATAGTGAATGATCAAGGGAACATAATAACACCTTCTTATGTTGCCTTCACTGAATCTCAAAGGATGATTGGTGATTCTGCTTTCAATATGGCTGTTTGCAACCCAATCAACACCGTCGCAACAAGCTCATATACCATTTCTAGCCAACAATATCCAAATCACCGGCGCTGTGGAGACAACGACAACCAAAACCAGAGCACCCAACAACCACCCAAAACCACGCCAATAAGCAGCAAACAGATTAATGGATATATGCAAACAAATCCAAGCTAA 294 0.4116 MNDKVEIIVNDQGNIITPSYVAFTESQRMIGDSAFNMAVCNPINTVATSSYTISSQQYPNHRRCGDNDNQNQSTQQPPKTTPISSKQINGYMQTNPS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02653 97 PANTHER BNAA09G29100D PROTEIN 2 57 - -
Tsu06g02653 97 SUPERFAMILY Actin-like ATPase domain 2 56 IPR043129 -
Tsu06g02653 97 MobiDBLite consensus disorder prediction 57 97 - -
Tsu06g02653 97 Pfam Hsp70 protein 2 49 IPR013126 GO:0005524|GO:0140662
Tsu06g02653 97 PANTHER HEAT SHOCK PROTEIN 70KDA 2 57 IPR013126 GO:0005524|GO:0140662
Tsu06g02653 97 Gene3D - 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02653 Tsu-Chr6 34223152 34225044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02653 2 82 Calmodulin-binding Proteins AT1G56410 48.148 5.58e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02653 K03283 - dct:110114126 73.1738