Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02652 ATGGCAGATGTGATTGGGAATATAATTGTGATTGTTGTGACCGTTGCAACTGTGGCGGCGGCTATATATTTGGCAAGACCTATCCTTAGGCAATATCTTTTCCCCAAGCAAATGATAAAGGCAATGGGAAAATTCGTAGGCAATATTCAACCATTTTTTCGTCTTGATTCGCTACCAGGTATTCAGTATCAGGCTGCAATTGCATCTAAAGACTTCATTTATTTTGCATCAAGACAAAAGGTTTATGATGAACTCTTTGAAGCACTCAATGATGACTCCATCCATATGATGGGATTGTATGGAGAGGGTGGATGTGGAAAATCAACTCTTGTAACCGAAGTTGGCAAGCAGGCTGAGGATCGGAAAATGTTTGATAAGGTTATATCAATCACTGTGTCTCGAACTCCAAATATTAGAGCCATTCAAGGAAAAATTGCAGATATGTTAAAATTGAAACTGGgtgaagaaagtgaagagggAAGAGCACAACGCTTATGGACGTGTTTAAGAAAAAAGAAGCGAATTCTTATCATAGTAAACAATTTATGGAGAGAGTTCGAACTGATGGATATTGGGATTCTCTTAGATGATGATATCAAGAAAACTTGGAAAATCCTCATAACCACGCGTCACGAGCATGTTTGTACATTAATGGACTGTCAAAAGAAGATTCATTTGGAGCTCTTGTCTGATGATGAGTCTTGGAGTTTATTCCAAAAGTTTGCAAGAATTGATGACGAGCTCTCCAAGGTATTGCATAATGTGCCACGAAAAATATGCAATGAATGTATGGGACTTCCCATAGCAATAAAAATTGTGGGGTCATTATTCAAAGGAAGGCAGGAAATTATGTGGCAAGATGCGTTTGAGAAGTTAAGGGCTTCAAAGGCATCTGATGAGGAAGAGAGTGCTACTTCTTGCATTAAATTAAGCTATGATTATTTACCAGCggaaaaagcaaaacaaatttTTGTATTGTGCGCTCTTTTTCTAGAAGATTATCACATCCCAACAGAAGATTTGGTGAGGTATGCACTTGGACTAGGAGGGGGAGAAATATCATCATTACAGTCAATGAGGAGCTCAATAAGCGCAGTCATAGAAAAACTTCTAGATTCTTGTTTGCTGACACGTGGTTCTGTAAAGATGCATAACATGGTTCGTGATGCAGCCTTATGGATTGCAAATAAATCAGATGATTGCAAAATCTTGGTAAATGTTGACAAACCACTTAGCGCTGTGGCAGACGATAACAGATTAAGAGATTGTTTTGCAGTATCTTCATGGTGGTACAATGAAAATCCCTCTTTTTGTCAATTACATGCTCCAAATCTGAAAATGCTAATGGTAAATATAAGTGCTCATAGTTCATTGAATTCCTTGGATTTATCACATATATCATTTGAAGGAATACAAGGGCTTGAGGTTTTCTCTCTAACCATCAATTACAAAATAGTACCAATATCATTTCCTACATCAATCCAATTGTTGACAAATGTTCGAACTCTGCGCTTAAATGGATTGAAGCTTGGTGACATTTCTTTCATAGCAAGCTTAACAAGTCTAGAAATTCTTGACTTGCGACATTGTTACTTCAATGAACTTCCTATTGATTTAGGAAACCTCAAAAGCCTGAAGCTGCTAGATTTGTCAAAATGTCATATTTCTGAAAAACACTATAATGGTGCAATAGGAAATTGTTCACAGCTAGAAGAGTTGTATGCTTTACCATGCTACCCAGAAGAATACGTTCAGGAGATAATTGTTGACACTGATGATACTCTCCCAAAGTTGCAGAGATTTGTACTAAATCATTCATTCtttccaaaagataaaatatttacGGACATTAAGAATTTAAATATCTCCATGTTCAAGGGATCCAAAATGAATATTCTGCAAATGGCTGAAACTATTTCTTTGACTGGCTTGCATGGAGGATGTAAAAATATAATACCAGATTTGGTTGGAGGCATGAATAATTTGTCTACTCTTCATCTTACTGATTGTAGTGAGATAAACTGCATCTTTGATACAACTTGCGATTTCAAGGAAGATGATATAATTCCCAGGACAGATGAAGTACTCTTCTCAGAATCTATTGCTCAAAGTCTGCAGAAACTAGAACAGCTAACAATACATGGTTGCAGTGAATTGAAGCATATAATTTCTGCAAGTGGAAGTGAACATGGTGGCTGTAGTACAAGTGAGGAAATAGTTCCAGCTCCAATgaactccaatttttttatgaccAATATAAGGGATGTTAACATTTATGATTGTCCAAGATTAGAGTCGATATTTCCTCTTTGTTATGTCGAAGGAGTTCCACGATTGCAAAAGATGCATATATCACTTGCTCCTAATCTGAAATATGTGTTTGGTAAATGTGATCACGAACACCTTTCATCATACCAAAACCTGAACAATGCCATGCTTCCTCATTTGGAAGTTCTAAAACTGGTTTATCTTGAGAATCTCATTGGGATGTGTCCAGAGAATTATCAAGCAAATTGGCCATCTCAGTCTCTGAGGATACTAACCATACAGAATTGTCGAAAATTGGCTATACCATGGTTCAGTTTGAACGCTGGGTATGATCAGAGACAACATCATCTGAATGAAATTTGGAGTTTGCAATGCCTTGAGTATTTATCATTGACATATTGTGAAGAATTAAAATGTTTGTTCTCCATGGAAATACATAGAAGCCTACCAGAGTTGATGTACCTTTGCGTTTGTAATTGTGATGAATTGGAACAAATTGTTGCAACAAATGAAGAACTTGTGGAGCTTTGTAATTCTGAATTGTATTTTCCAAAGCTAAAACAAATATCAGTCTATAACTGCAACAAGTTGAAAAGCGTTTTCCCTCTTTCTATGGTTACAATGCTTCCACAATTAAGCATTCTTACCTTAATAGATGCTACTCAACTTCAAGAGGTTTTTAGACATAGTCAAGGAGACGGCATTATGAATGAAATGGAAATTGTTCTTCCAAACTTGACGGAAATAACACTGGCCAGTCTACCAAATTTTGTAGATATCTGCTGTGGTTCTAAGTTACATGCCGTTAAACTTCAAACACTCAGCATATCTTGCTGCCCCAAAACTGCTTCAAGCTTAAGAATAATTCAGACTGAAACTGAAGCAGTACCATACTTGCCCAAGTCCTCGAGGTACAcaagaaaagaaattgaaaaaagaagCGAATTTAATGCTGAAGATTGGGAGGAGATTGAGACGATGATAAAAAAAGCTGAGAAGTACAAAGGTGAAGACAAGAGGTATAGAATGAAGGTGGAAGCAAGAAATGCATTGGCGAAGTATGCATACAGCATAAGTAATGCCATAAATGATAAAGAGATTAGCTCAAagctttcttcaaaagaaaacaaagtgATCAATGAAGCAATTGATTCGGTCTTAATGTGGCTAGATGTCAATGTGGTTGAAGAACAACGTGATTTTGAATATTATAGAAGCCTTCTTTCAAACGTGTTTGATCCAATTATTGTGAAGATGATAAACGAAGAAGGAAATAACGTGCAACTCGGTACTGACGAAGAGGGGAATAACAAGCAACTCGATACTAACAAAGAGGGAAAGAAATTTGCAATAGGAATCGACCTAGGAACAACAAATTCTCGTGTTGCTGTGTGGAGGAATGATCAGTTAGAGATTATATGCAACGACCAAGGGAACAGAACAACACCTTCTTATGTTGCCTTCACTGATTCTCAAAGGATGATTGGTGATTCTGCTTTCAATATGGCTGCTTGCAACCCTACCAACACTGTCTATGATGCAAAGAGGCTAATTGGTAGGAAATTTTCTGACACCATAGTACAAAGTGACATGAAATTATGGCCATTTAAAGTAGTTGGCGGCTTTGATGAGAAACCCATGATTGTTGTAAACTACAACGACGAAGAAAAACAATTTCCTGCCGAGGAAATATCATCCATGGTATTGGCAAAATTGCGTGATATTGCAGAAGCTTACATTGGATCAACAGTGAAAGATGTTGTTATAACCGTTCCTGCTTATTTTAATAACTCACAACGTGAAGCTACTCGAGATGCAGGTGTTATTGCAGGCCTCAATGTTATGCGAATAATCAACGAGCCTACTGCAGCAGCAATTGCATATGGCCTTGACATGAAACCATTTAATCAAGGACGAAGGCATGTTTTCATTTTTGATTTAGGTGGTGGTACTTTGGATGTGTCTGTTGTCACATTTGAGAAGGATGATATCAAAGTTAAAGCCCATGCTGGAGACACTCACCTCGGAGGACAGGACTTTGATAATACAATGGTGGACCATTTTGTGAAGGAGTTCTTAAGGAAGAATAAAGTTGACATTAGTAGAGACCCAAGAGCTATGAGGAGGTTGAAGTCGGCTTGTGAGAAAGCAAAGAGGATACTTTCTTTCAATACTAACACCACCATTGAGATAGAATGTTTAAATCAAGgtatagatttctactcaaCAATTAGTCGCATAAAGTTTGAGGTACTCAACAAGAATCACTTCAGCAAGTGCATGGAGATTGTTGAACAGTGTCTAATAGATAGCGGCGTGGAAAAGAGTAGCATTGATGATGTTGTCCTAGTTGGTGGCTCTACAAGGATTGTAAAATTGCAAGAACTATTGAGTGATGTCTTTGAAGGCAAGGAATTATGCAAAAGAATCAATGCCGATGAGGCGGTTGTATATGGTGCTTCTGTCCAAGCATCTATATTGATTGGGGACCAATTCAATGAAAAAGATCAAGTTTTGAAGGAAGTCATTCCTTTGTCCCTTGGATTGGAAACACATGGAGGGATCATGAAAGTAATAATTCCTAGGAATACCACAATTCCTACAAACAAGGAACACATATTCACCACACATTTGAACAACCAAACCAATATTCTAATTCATGTTTATGAGGGTGAGAGGCAAGCAACTAGGGACAACAACTTGCTAGGAAAATTTGTGTTGGAAATTCCTCCGGCTCCGGCAGGTGTTCCTCAAATCAAAATCAGGTTCCAAATTGATGATGATGGCATCTTACATGTCACTAGCTCGGAAAGATCTCTTGGAGTTAACAATgaagttaaaataataagtgaCAAGGGAAGACTGTCAACGAATGATATTGAAAGGATGATCAAAGAAGCGGAGGACTACAAAGATCAAGAAAAGAGGTATAGAAAAAAGGTTGAAGCAAGAAATGCAGTGGAGCAGTATGCGTACGACATGAGGGATGCCATAAATGATAAGGAGATTAGATCGAAGCTTTCCAATGAAGATAAGAAAAAGATCAATGATGTAATTAATTTGGTTTTAACGTGGCTTGATATCAATAATGTTGCAGAACAATATGATTACGAGTGTTATGCAAGAGATCTTTCAAAAGTGTTTGATCCAATTATTATGAAGATGATAAACGAAGAGGGAAATAACATGCAACTCGGTACCGTTGTTGGTTATGCGGTtgaagtttataataaaaagaagaaacgATGGACATCAGATATTAGAAAAATATGCTTTCAAGATAGGATTATTGGTAGTTCTTCTGCCGGTGCTACCGAAAGGCCGTTTAAGTTTGAAGGTAATCATTTCAAACGTTGGCAACAGAAGATGTTTTTCTTCCTGACTCTGAAAAAATGTGCCTACGTTTTGAAAGATCCTATTCCTGTGGTTCCTGTTGTGCCGACTGATGCTTCGGCCTCAGGAACAAAAGAACAGCCCGTTAACACCAACGGTCAAACTGGTTCTGCTGCTGAACCTGACAAAGAAGATGATCTGTATGATTATTACAGAACCTATGACACAGCTAGTGATGTTTGGGAGGCTCTGAGTAAGAAATATGATACTGAAGAAGCTGGTGTTAAGAAGTATGCAGTCAGCAGGTATCTGAAATATCAGATGGTGGATGAGAGGTCGGTGGAAGCACAGTCACATGAACTGCAGAAGATTGCTCATGAGATAATCACTAAAGGTATGCCTTTACATGAGCAGTTTCAAATTTCTGTGATTATTGATAAGCTGCCCCCTAGTTGGAAAGACTTTAAGAATCAGCTCCATCATAAGACAAAGGAGTTTTCCATTGAAGGTCTGATTACTCGTCTTCGTATAGAAGAAGAATCTCGGAAACAAgatatgaaagaagaagaaaagatattGGTTGTttttaacaacaataaaaagaaattcggtGCAGCTCTGATGCCTACGGGCAAACCATTGAAAAATCAGAATCAGAGCCGCAATCAAAACCGAGTTAAGAATGGTAACCCGGTTAGGGGCCATAATGCTAGGCAGCATCAGCAACCACCTCCTAGAAATGACGCTGTTGATCCATTTTATTACTTCAATTGCTGGAAAACAGGTCATATGTCCAAGAAGTGCAGAAATCCAAAGAGGCCTAAATCGGCTAACCTTGCACATATTAATGTGAATGTGGCTGATGAGCCAtatactgttggaacaaaatatgtgttaatacacacccttaagttttga 6519 0.3655 MADVIGNIIVIVVTVATVAAAIYLARPILRQYLFPKQMIKAMGKFVGNIQPFFRLDSLPGIQYQAAIASKDFIYFASRQKVYDELFEALNDDSIHMMGLYGEGGCGKSTLVTEVGKQAEDRKMFDKVISITVSRTPNIRAIQGKIADMLKLKLGEESEEGRAQRLWTCLRKKKRILIIVNNLWREFELMDIGILLDDDIKKTWKILITTRHEHVCTLMDCQKKIHLELLSDDESWSLFQKFARIDDELSKVLHNVPRKICNECMGLPIAIKIVGSLFKGRQEIMWQDAFEKLRASKASDEEESATSCIKLSYDYLPAEKAKQIFVLCALFLEDYHIPTEDLVRYALGLGGGEISSLQSMRSSISAVIEKLLDSCLLTRGSVKMHNMVRDAALWIANKSDDCKILVNVDKPLSAVADDNRLRDCFAVSSWWYNENPSFCQLHAPNLKMLMVNISAHSSLNSLDLSHISFEGIQGLEVFSLTINYKIVPISFPTSIQLLTNVRTLRLNGLKLGDISFIASLTSLEILDLRHCYFNELPIDLGNLKSLKLLDLSKCHISEKHYNGAIGNCSQLEELYALPCYPEEYVQEIIVDTDDTLPKLQRFVLNHSFFPKDKIFTDIKNLNISMFKGSKMNILQMAETISLTGLHGGCKNIIPDLVGGMNNLSTLHLTDCSEINCIFDTTCDFKEDDIIPRTDEVLFSESIAQSLQKLEQLTIHGCSELKHIISASGSEHGGCSTSEEIVPAPMNSNFFMTNIRDVNIYDCPRLESIFPLCYVEGVPRLQKMHISLAPNLKYVFGKCDHEHLSSYQNLNNAMLPHLEVLKLVYLENLIGMCPENYQANWPSQSLRILTIQNCRKLAIPWFSLNAGYDQRQHHLNEIWSLQCLEYLSLTYCEELKCLFSMEIHRSLPELMYLCVCNCDELEQIVATNEELVELCNSELYFPKLKQISVYNCNKLKSVFPLSMVTMLPQLSILTLIDATQLQEVFRHSQGDGIMNEMEIVLPNLTEITLASLPNFVDICCGSKLHAVKLQTLSISCCPKTASSLRIIQTETEAVPYLPKSSRYTRKEIEKRSEFNAEDWEEIETMIKKAEKYKGEDKRYRMKVEARNALAKYAYSISNAINDKEISSKLSSKENKVINEAIDSVLMWLDVNVVEEQRDFEYYRSLLSNVFDPIIVKMINEEGNNVQLGTDEEGNNKQLDTNKEGKKFAIGIDLGTTNSRVAVWRNDQLEIICNDQGNRTTPSYVAFTDSQRMIGDSAFNMAACNPTNTVYDAKRLIGRKFSDTIVQSDMKLWPFKVVGGFDEKPMIVVNYNDEEKQFPAEEISSMVLAKLRDIAEAYIGSTVKDVVITVPAYFNNSQREATRDAGVIAGLNVMRIINEPTAAAIAYGLDMKPFNQGRRHVFIFDLGGGTLDVSVVTFEKDDIKVKAHAGDTHLGGQDFDNTMVDHFVKEFLRKNKVDISRDPRAMRRLKSACEKAKRILSFNTNTTIEIECLNQGIDFYSTISRIKFEVLNKNHFSKCMEIVEQCLIDSGVEKSSIDDVVLVGGSTRIVKLQELLSDVFEGKELCKRINADEAVVYGASVQASILIGDQFNEKDQVLKEVIPLSLGLETHGGIMKVIIPRNTTIPTNKEHIFTTHLNNQTNILIHVYEGERQATRDNNLLGKFVLEIPPAPAGVPQIKIRFQIDDDGILHVTSSERSLGVNNEVKIISDKGRLSTNDIERMIKEAEDYKDQEKRYRKKVEARNAVEQYAYDMRDAINDKEIRSKLSNEDKKKINDVINLVLTWLDINNVAEQYDYECYARDLSKVFDPIIMKMINEEGNNMQLGTVVGYAVEVYNKKKKRWTSDIRKICFQDRIIGSSSAGATERPFKFEGNHFKRWQQKMFFFLTLKKCAYVLKDPIPVVPVVPTDASASGTKEQPVNTNGQTGSAAEPDKEDDLYDYYRTYDTASDVWEALSKKYDTEEAGVKKYAVSRYLKYQMVDERSVEAQSHELQKIAHEIITKGMPLHEQFQISVIIDKLPPSWKDFKNQLHHKTKEFSIEGLITRLRIEEESRKQDMKEEEKILVVFNNNKKKFGAALMPTGKPLKNQNQSRNQNRVKNGNPVRGHNARQHQQPPPRNDAVDPFYYFNCWKTGHMSKKCRNPKRPKSANLAHINVNVADEPYTVGTKYVLIHTLKF 2172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02652 2172 CDD AAA 78 212 - -
Tsu06g02652 2172 ProSitePatterns Heat shock hsp70 proteins family signature 2. 1400 1413 IPR018181 -
Tsu06g02652 2172 Gene3D - 1389 1563 - -
Tsu06g02652 2172 SUPERFAMILY Actin-like ATPase domain 1205 1388 IPR043129 -
Tsu06g02652 2172 Gene3D - 1207 1580 - -
Tsu06g02652 2172 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1204 1823 - -
Tsu06g02652 2172 Pfam NB-ARC domain 80 313 IPR002182 GO:0043531
Tsu06g02652 2172 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1078 1187 - -
Tsu06g02652 2172 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1589 1739 IPR029047 -
Tsu06g02652 2172 Coils Coil 1716 1736 - -
Tsu06g02652 2172 MobiDBLite consensus disorder prediction 1907 1925 - -
Tsu06g02652 2172 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1102 1180 IPR029048 -
Tsu06g02652 2172 Gene3D - 1076 1177 IPR029048 -
Tsu06g02652 2172 PANTHER HEAT SHOCK PROTEIN 70KDA 1204 1823 IPR013126 GO:0005524|GO:0140662
Tsu06g02652 2172 Gene3D - 64 227 IPR027417 -
Tsu06g02652 2172 Gene3D - 1740 1833 IPR029048 -
Tsu06g02652 2172 Gene3D Ribonuclease Inhibitor 433 821 IPR032675 -
Tsu06g02652 2172 Gene3D - 1268 1323 - -
Tsu06g02652 2172 Gene3D Actin; Chain A, domain 4 1432 1515 - -
Tsu06g02652 2172 SUPERFAMILY Actin-like ATPase domain 1396 1583 IPR043129 -
Tsu06g02652 2172 MobiDBLite consensus disorder prediction 2079 2110 - -
Tsu06g02652 2172 MobiDBLite consensus disorder prediction 2073 2115 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1672 1688 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1343 1363 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1233 1245 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1255 1263 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1566 1586 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1205 1218 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1592 1611 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1406 1416 - -
Tsu06g02652 2172 PRINTS 70kDa heat shock protein signature 1534 1550 - -
Tsu06g02652 2172 SUPERFAMILY L domain-like 382 1038 - -
Tsu06g02652 2172 Gene3D - 228 310 IPR042197 -
Tsu06g02652 2172 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1738 1816 IPR029048 -
Tsu06g02652 2172 ProSitePatterns Heat shock hsp70 proteins family signature 1. 1209 1216 IPR018181 -
Tsu06g02652 2172 Pfam Hsp70 protein 1206 1811 IPR013126 GO:0005524|GO:0140662
Tsu06g02652 2172 Pfam Hsp70 protein 1066 1173 IPR013126 GO:0005524|GO:0140662
Tsu06g02652 2172 PANTHER HEAT SHOCK PROTEIN 70KDA 1078 1187 IPR013126 GO:0005524|GO:0140662
Tsu06g02652 2172 MobiDBLite consensus disorder prediction 1905 1929 - -
Tsu06g02652 2172 Gene3D - 311 392 IPR036388 -
Tsu06g02652 2172 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1588 1744 IPR029047 -
Tsu06g02652 2172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 327 IPR027417 -
Tsu06g02652 2172 Gene3D Ribonuclease Inhibitor 862 1053 IPR032675 -
Tsu06g02652 2172 Pfam gag-polypeptide of LTR copia-type 1932 2051 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02652 Tsu-Chr6 34198012 34206617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02652 1201 1819 Calmodulin-binding Proteins AT3G12580 62.862 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02652 K03283 - mtr:MTR_3g053200 1212.98