Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02619 ATGGATTCACAACCTGAGATAAATGAGAAGATGGCAATACTCATTGATTGGCTAGATGTTCACACCAAATTTGATCTTTCACCTGAAACCCTTTATCTCACAATCAACATAGTTGATAGATTCCTAGATGTCAACCTTGTGCCAAGAAGAGAACTTCAATTGGTTGGCATTAGTGCCATGCTGATGACATCAAAGTATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTGACCCTCTCAGATTATGCTTACCCTCATGAACAAATTCTTATCATGGAGAAAACCATCTTAGGGGTTTGA 303 0.3894 MDSQPEINEKMAILIDWLDVHTKFDLSPETLYLTINIVDRFLDVNLVPRRELQLVGISAMLMTSKYEEIWPPEVNDFVTLSDYAYPHEQILIMEKTILGV 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02619 100 PANTHER CYCLINS 1 99 IPR039361 -
Tsu06g02619 100 Pfam Cyclin, N-terminal domain 1 99 IPR006671 -
Tsu06g02619 100 SMART cyclin_7 16 99 IPR013763 -
Tsu06g02619 100 Gene3D - 3 99 - -
Tsu06g02619 100 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 1 99 - -
Tsu06g02619 100 SUPERFAMILY Cyclin-like 2 99 IPR036915 -
Tsu06g02619 100 CDD CYCLIN 12 98 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02619 Tsu-Chr6 33695773 33696075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02619 1 99 Core Cell Cycle Gene Families AT3G11520 71.287 6.58e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02619 K21777 - mtr:MTR_7g089080 169.859