Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02611 ATGGCGGCTACATCTCCGACCTGGAAAAAAAACCATGATAATGGTTCCTCCCTAGAATTAGATAATGGCCAGTCAGCCCCCAGCCCAATTGGTAAGATGATCGTCGTAGCGTCCATTGCTGCTGGTGTTCAATTTGGATGGGCTCTTCAACTTTCTCTCTTGACCCCATACGTGCAGACTCTTGGAGTTCCGCACATATGGGCCTCTTTTATTTGGCTATGTGGCCCAATCTCTGGACTTCTTGTCCAGCCTATATGTGGTTATTATAGTGACCGTAGCACTTGCCGGTTTGGTCGTCGTCGTCCTTTCATCTTTTTTGGATCTCTAGCTGTAGCTATTTCTGTGTTCCTCATTGGATATGCTGCTGATCTCGGTCATTCATTGGGTGATGACCTTAACAAAAAAACTAGACCACGAGCAGTTGCTTTCTTCGTCGTAGGATTTTGGATCCTTGACGTAGCAAACAACATGCTCCAGGGACCATGTCGTGCTTTCCTCGCTGACCTTGCTGCGGGCGATGAGAAAAAGACGAGAACAGCTATGGGTTACTTCTCTTTCTTCATGGCCCTCGGTAACATCCTTGGATATGCCGCGGGTTCCTACAGCAAACTCCATAATTGGTTCCCCTTTACTGAAACTGAAGCATGTAACGTCTTCTGTGCGAATCTTAAAAGTTGCTTCTTTTTCTCCATTATTCTCTTGGCAATCCTTGCTGGTACCGCCCTCATTATTGTCGAGGACAAACCAATGGAGAAACAAATGGAGAGTGACAACGACATGCAGGCTTCTTGCTTCGGAGATCTGTTCGGTGCACTAAAGGAATTGAAGAGGCCAATGTGGATATTAATGTTAGTGACTTGCGTGAACTGGATCGCGTGGTTCCCATTCTACTTGTTCGATACCGATTGGATGGGTCATGAGGTATATGGAGGAGTTACAGGAGAGCAAGCATATGACAATGGAGTGAGAGCTGGTTCTTTGGGACTTATGGTTAATGCTATTGTTCTTGCTTTCATGTCATTAGCGGTAGAGCCATTGGGAAAATTCGTTGGAGGAATCAAGAGACTTTGGGGTATCGTTAACTTCATTCTGGCTATCGGCTTGGCAATGACCGTCGTCATTACTAAAATTGCAGAAAAAGAACGTCAACTTAGTGGTGGTGCCACCATTGGATATCCTTCTGAAGGTGTCAAGATAGGCGCCATGCTCTTCTTCGCAGTTCTTGGAATCCCTATGGCGATTACTTACAGTGTTCCTTTTGCTCTAGCATCAATATATAGCAGTGCTTCAGGGGCAGGACAAGGTTTATCGTTAGGTGTCTTGAATCTTGCAATTGTGGTACCACAGATGTTTGTGTCAACACTAAGTGGACCTTGGGATGCTCTATTTGGTGGCGGTAATTTGCCGGCATTTGTCGTTGGTGCGGTGGCTGCCGTCATCAGCGCCATATTGGCGATGGTTATGTTGCCGTCGGTCAAGCCGGATGATGAGGCCAAGCTTAAACTTGGTGGCAGTTTCCATTGA 1524 0.4633 MAATSPTWKKNHDNGSSLELDNGQSAPSPIGKMIVVASIAAGVQFGWALQLSLLTPYVQTLGVPHIWASFIWLCGPISGLLVQPICGYYSDRSTCRFGRRRPFIFFGSLAVAISVFLIGYAADLGHSLGDDLNKKTRPRAVAFFVVGFWILDVANNMLQGPCRAFLADLAAGDEKKTRTAMGYFSFFMALGNILGYAAGSYSKLHNWFPFTETEACNVFCANLKSCFFFSIILLAILAGTALIIVEDKPMEKQMESDNDMQASCFGDLFGALKELKRPMWILMLVTCVNWIAWFPFYLFDTDWMGHEVYGGVTGEQAYDNGVRAGSLGLMVNAIVLAFMSLAVEPLGKFVGGIKRLWGIVNFILAIGLAMTVVITKIAEKERQLSGGATIGYPSEGVKIGAMLFFAVLGIPMAITYSVPFALASIYSSASGAGQGLSLGVLNLAIVVPQMFVSTLSGPWDALFGGGNLPAFVVGAVAAVISAILAMVMLPSVKPDDEAKLKLGGSFH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02611 507 MobiDBLite consensus disorder prediction 1 24 - -
Tsu06g02611 507 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 23 498 - -
Tsu06g02611 507 CDD MFS_SLC45_SUC 33 485 - -
Tsu06g02611 507 PANTHER SUGAR TRANSPORTER 23 498 - -
Tsu06g02611 507 Pfam MFS/sugar transport protein 41 292 - -
Tsu06g02611 507 Gene3D MFS general substrate transporter like domains 31 490 IPR036259 -
Tsu06g02611 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 494 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tsu06g02611 507 SUPERFAMILY MFS general substrate transporter 34 494 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02611 Tsu-Chr6 33608027 33610114 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02611 9 507 Sucrose Transporter Gene Family AT1G22710 63.386 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02611 K15378 - gmx:100784153 719.153