Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02609 ATGGAGGCTACATCTGCCACCAAGAAAAACAATGACAAGGCTTTGCCTCTTGAATTGGAAACTGTTCAGCCCGCCTCGAGCCCTCTTCGTAAGATGGTCGTTGTGGCGTCCATAGCAGCCGGTGTTCAATTTGGATGGGCTCTACAGCTGTCCTTATTGACTCCATACGTGCAAACTCTTGGAGTTCCGCACGTATGGTCGTCCTTCATCTGGCTATGTGGTCCAATCTCTGGACTACTAGTCCAGCCTATAGTAGGTTACTATAGTGACCGAAGCACTTCACGCTTTGGTCGCAGACGTCCCTTCATCTTTGCTGGAGCTCTTTGTGTTGCTATTGCTGTTTTCCTCATTGGTTATGCAGCTGATCTTGGTCACTCCTTTGGTGATGACTTGTCTAAGAAAACCCGACCGCGGGCTGTTGCTATTTTCGTCATTGGATTTTGGATCCTTGACGTTGCCAATAACACGCTCCAGGGACCGTGCCGTGCCTTCCTAGCTGACCTTGCGAACGGTGATGAGAAAAAGACGAGAACAGCAAACagtttcttctctttcttcatGGCCGTCGGTAATATCCTTGGATATGCCGCCGGCTCCTTTAGCAAACTCCACAAAATCTTCCCCTTCACTGACACTGAAGCATGTAACGTCTTTTGTGCGAATCTTAAAAGTTGCTTCTTTTTCGCCATCCTCCTCTTAATTGTCCTCGCCAGCACAGCCCTCATCTACGTCAAAGAGACACCAAAGTCGAAGCTAGAGGTGACCGATGACGATAAACAAGTTTCTTGTGCCGGAGAGTTGTTCCATGCATTGAAGGAATTGAAGAGGCCAATGTGGATATTGATGGCAGTAACAGCCGTGAACTGGATCGCGTGGTTCCCATTTTTCTTGTTCGATACTGACTGGATGGGCCGTGAGGTGTACGGAGGAGTTGCCGGAGAGAAAGCATATGACACTGGTGTGAGAGTTGGTTCTTTGGGACTTATGCTTAATGCTGTTGTTCTTGGGCTTATGTCTTTAGCTGTGGAACCATTGGGGAAATTGGTAGGAGGAATTAAGAGGCTTTGGGggattgttaattttattttggctATTGGTTTGGCAATGACTGTCGTCATCTCGAAAGTGGCTGAACATGAGCGTCAGACGTCCGGTGGTGCCACTGTCGGACATCCGTCCGATGGTATCAAGATTAGTGCCATGTTCTTCTTTGCGGTTCTTGGAATTCCTATGGCCATTACTTTCAGTGTTCCATTTGCTCTAGCATCAATATATAGCAGTGCCTCAGGAGCAGGACAAGGTTTATCTATAGGAGTATTGAATCTTGCAATTGTGGTACCACAGATGTTGGTGTCAGCACTAAATGGACCTTGGGATGCTCTATTTGGTGGTGGTAATTTGCCGGCGTTCGTGGTGGCAGCGGTGGCTGCTGCAGTTAGTGGCATATTAGCGATGGTCTTGCTGCCGACAGTCAAACCAGAAGATGAGGCCAAGGTTAAAGTTGTTGCAGGCTTTCACTAA 1521 0.4688 MEATSATKKNNDKALPLELETVQPASSPLRKMVVVASIAAGVQFGWALQLSLLTPYVQTLGVPHVWSSFIWLCGPISGLLVQPIVGYYSDRSTSRFGRRRPFIFAGALCVAIAVFLIGYAADLGHSFGDDLSKKTRPRAVAIFVIGFWILDVANNTLQGPCRAFLADLANGDEKKTRTANSFFSFFMAVGNILGYAAGSFSKLHKIFPFTDTEACNVFCANLKSCFFFAILLLIVLASTALIYVKETPKSKLEVTDDDKQVSCAGELFHALKELKRPMWILMAVTAVNWIAWFPFFLFDTDWMGREVYGGVAGEKAYDTGVRVGSLGLMLNAVVLGLMSLAVEPLGKLVGGIKRLWGIVNFILAIGLAMTVVISKVAEHERQTSGGATVGHPSDGIKISAMFFFAVLGIPMAITFSVPFALASIYSSASGAGQGLSIGVLNLAIVVPQMLVSALNGPWDALFGGGNLPAFVVAAVAAAVSGILAMVLLPTVKPEDEAKVKVVAGFH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02609 506 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 21 496 - -
Tsu06g02609 506 Pfam MFS/sugar transport protein 40 291 - -
Tsu06g02609 506 CDD MFS_SLC45_SUC 32 467 - -
Tsu06g02609 506 PANTHER SUGAR TRANSPORTER 21 496 - -
Tsu06g02609 506 Gene3D MFS general substrate transporter like domains 26 488 IPR036259 -
Tsu06g02609 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 28 492 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tsu06g02609 506 SUPERFAMILY MFS general substrate transporter 32 494 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02609 Tsu-Chr6 33565388 33567859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02609 8 506 Sucrose Transporter Gene Family AT1G22710 65.753 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02609 K15378 - gmx:100784153 746.503