Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02599 ATGGCAAAAAAGCATGAGGGATGTGCTGTGGGAATTGACCTTGGAACAACTTATTCATGTGTTGCTGTTTGGGTTGATGAACACAATAGAGTTGAAATTATTCACAATGATCAAGGCAACAGAACCACTCCTTCTTTTGTTGCTTTTGCTAATGATCAAAGCTTGATTGGTGATGCTGCTAAGATTCAGGCTACCTCCAACGCACAAAACACTGTCTTTGatGCTAAGAGGCTAATCGGTAGGAAGTACAGTGATTCTATCGTTCAGAATGATATGATGTTGTGGCTATTCAAGCGAAAAGCCACCATAGATGCTGGTTCTATTGCTGGCCTTAATGTCATCTGGATAATCAATGAACCTACCGCGGCAGCTATTGCGTATGACCTTGACAACAGAAGTGATACCGATGGTAAACGAAATATTCTTGTCTTTGACCTTGGTAGTGGTACTTTTGATGTGTCTATTCTCACTATTAAAGGCGATGTCATTGAAGTAAAAGCCACCGCTGGAAACACTCACTTAGGGGGAGAGGACTTTGATAACAGAATGGTGAACTACTTTGTCGAGGAGTTCAAAAAGAAGAATAATGTGGACATTAGTGGGAACTCAAAATCGTTAAGGAGATTGAGAACCGCGCGTGAGAGGGCAAAACGGACACTCTCTTTTGCTTTTGTGACCACTGTGGAGGTGGATTCTTTATGTATGGGAATCGACTTTATTTCAACAATCACTCGTGCCAAATTTGAGGAAATTAATATGGACTTTTTCAATGAATGTATGAAAACCGTTGACAACTGTCTCAGGGATTCAACCATATACAAGAGTGATATTGATGATGTTGTTCTTGTCGGTGGCTCGTCTAGGATTCCAAAAGTGCAGGATCAATTGCTAAAGCTTTTCAAGGGGAAAGATTTGTTTATGCATATTAACCCAGATGAGGCTGTTGCTTATGGTGCAGCTGTTCATGCGGCTATTTTGAGTGAAGGCTTTAAGAATGTACCGAATTTGGTGCTAAAAAATAAGACCCCGTTGTCACTCGGAATTGGTACGGGAAAAGGTGTTAACAATGTCATGAGTGTGGTGATTCCTAGAAACACTAGCATACCTGtcaagaagaaaagaatttaTAAATTGGTTAATCCCAAGGTCACTATTAATGTTTATGAGGGAGAGAGAACACGATCTCCGGACAATAATCTGCTAGGTTCATTTGTTCTTTCTTGTCATCCAAACGCTCCTCGTGGCAGCCCGTTGGAGGTAAGCTTTTCTATCGATGAAAATGGTATCTTAACTGTTTCTGCTAAAGAAATATATACTGGAAATATGAAAAAGATCAGCATACCAAATTACAAAGAAAGGTTGAAATACCATGTGGAagatatgaaatttttaagGAAGGCCAACGTGAGTAAATTGGATTCTTGGGTATACAATATGAAAAATGCTTTAAAGAAGAGGATGTTATGCTCTCCCCTCAAGAAATAG 1485 0.3912 MAKKHEGCAVGIDLGTTYSCVAVWVDEHNRVEIIHNDQGNRTTPSFVAFANDQSLIGDAAKIQATSNAQNTVFDAKRLIGRKYSDSIVQNDMMLWLFKRKATIDAGSIAGLNVIWIINEPTAAAIAYDLDNRSDTDGKRNILVFDLGSGTFDVSILTIKGDVIEVKATAGNTHLGGEDFDNRMVNYFVEEFKKKNNVDISGNSKSLRRLRTARERAKRTLSFAFVTTVEVDSLCMGIDFISTITRAKFEEINMDFFNECMKTVDNCLRDSTIYKSDIDDVVLVGGSSRIPKVQDQLLKLFKGKDLFMHINPDEAVAYGAAVHAAILSEGFKNVPNLVLKNKTPLSLGIGTGKGVNNVMSVVIPRNTSIPVKKKRIYKLVNPKVTINVYEGERTRSPDNNLLGSFVLSCHPNAPRGSPLEVSFSIDENGILTVSAKEIYTGNMKKISIPNYKERLKYHVEDMKFLRKANVSKLDSWVYNMKNALKKRMLCSPLKK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02599 494 ProSitePatterns Heat shock hsp70 proteins family signature 3. 280 294 IPR018181 -
Tsu06g02599 494 Gene3D - 99 324 - -
Tsu06g02599 494 Gene3D - 1 98 - -
Tsu06g02599 494 Pfam Hsp70 protein 9 97 IPR013126 GO:0005524|GO:0140662
Tsu06g02599 494 Pfam Hsp70 protein 98 462 IPR013126 GO:0005524|GO:0140662
Tsu06g02599 494 PANTHER HEAT SHOCK PROTEIN 70KDA 98 490 IPR013126 GO:0005524|GO:0140662
Tsu06g02599 494 PANTHER HEAT SHOCK PROTEIN 70KDA 4 98 IPR013126 GO:0005524|GO:0140662
Tsu06g02599 494 PANTHER HEAT SHOCK 70 KDA PROTEIN 98 490 - -
Tsu06g02599 494 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 98 - -
Tsu06g02599 494 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tsu06g02599 494 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 326 488 IPR029047 -
Tsu06g02599 494 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 332 456 IPR029047 -
Tsu06g02599 494 SUPERFAMILY Actin-like ATPase domain 136 327 IPR043129 -
Tsu06g02599 494 ProSitePatterns Heat shock hsp70 proteins family signature 2. 143 156 IPR018181 -
Tsu06g02599 494 SUPERFAMILY Actin-like ATPase domain 8 130 IPR043129 -
Tsu06g02599 494 Gene3D - 132 309 - -
Tsu06g02599 494 Gene3D Actin; Chain A, domain 4 175 258 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 38 50 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 60 68 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 277 293 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 309 329 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 335 354 - -
Tsu06g02599 494 PRINTS 70kDa heat shock protein signature 415 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02599 Tsu-Chr6 33490604 33492355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02599 1 98 Calmodulin-binding Proteins AT3G12580 69.388 2.67e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02599 K03283 - gmx:102667578 523.087