Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02591 ATGGGGAAAAAGGGAAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTCATGATTCAAGAAAAGACAAGaaaagtaagaaatcaaagaaaaaaagtgcTCAAAAGGACTTAGAAGTGGAATCAGAAGAAGTTGTTATTCCACAAATAGAAGATGTGAAATTAAGTGAGGTAGAgaatgaacaaaataaacaagcAATTTCTCTTGCTTTTGCCACTGCTGTCGCCGCAGGGGCTGCTGTTGCTGCTGCTCAGGCTGCTGCTGAGGTTGTTCGTCTCACGAGTATGCCTCATTTCCCGGCAAAGACTAAGGAAGAATTGGCTGTTATCAAGATTCAGACAGCGTACCGCGGATATTTGGCGAGAAGGGCGTTGCGAGCCTTGAGAGGTTTAGTGAGGTTGAAGACATTAGTACAAGGACAATCAGTTAAAAGGCAAGCAGATAGCACCTTAAGATGCATGCAAACTCTAGCAAGATTGCAGAAACAGGTTCGCGAAAGGCGAATTCGAATGTCCGAGGAGAATCAGGCTCTTCAGCGCCAACTACAACAGAAACACGAAAAAGAACTTGTGAAGTTGCAAGCTTCTGTAATTGGAGAAGAATGGAATGCTAGCTTGCAGTCAAAGGaacaaattgaaacaaaattgtTGCAAAGGCAAGAAGCTGCTTTCAAAAGAGAGAGGGCTTTGGCTTATTCATTCTCACATCAGAAAACATGGAAgaattcttcaaaatctatgAACCAAACATTTATGGATCCAAACAATCCTCACTGGGGATGGAGTTGGTTAGAGAGATGGATGGCAACTCGACCGTGGGAAGGCGAAAGCATCATTATGAATCACAATGATCATGCATTTAGTAAGAGTTCTTCATCAAAGCATAATTATGTTCTTAATTATGATAACAAACCCTCTCCAAATAGCCAAAAATCAAGAAGACAAAGCATTCATAATTCTCCTTCAACTTCAAAGGCAAGGCCATCAAGCTCAAAGGGTGGCGAAATTACCGATGACTCAACAAGCATGTTTAGTGCTCAATCCGAACGGTATCGAAGATATAGTAGTATTGCAGGATCATCCATTAGAGACGATGCGAGCGTTGAAAGCTCGCCAGTGTTTCCTAGTTACATGGCACTCACAAGTTCAGCAAAGGCAAAGTCCAAATTAATTCAAAGACAATCACCATCTTCAATTTCTGCAAGGAAAAGGCTTTCTTTTCCTGCTTCTCCTATTGGTTCAAGAAGGCATTCCGGTCCACCAAAGGTGGACATATAA 1275 0.3961 MGKKGSWFSAVKKVFSHDSRKDKKSKKSKKKSAQKDLEVESEEVVIPQIEDVKLSEVENEQNKQAISLAFATAVAAGAAVAAAQAAAEVVRLTSMPHFPAKTKEELAVIKIQTAYRGYLARRALRALRGLVRLKTLVQGQSVKRQADSTLRCMQTLARLQKQVRERRIRMSEENQALQRQLQQKHEKELVKLQASVIGEEWNASLQSKEQIETKLLQRQEAAFKRERALAYSFSHQKTWKNSSKSMNQTFMDPNNPHWGWSWLERWMATRPWEGESIIMNHNDHAFSKSSSSKHNYVLNYDNKPSPNSQKSRRQSIHNSPSTSKARPSSSKGGEITDDSTSMFSAQSERYRRYSSIAGSSIRDDASVESSPVFPSYMALTSSAKAKSKLIQRQSPSSISARKRLSFPASPIGSRRHSGPPKVDI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02591 424 MobiDBLite consensus disorder prediction 16 42 - -
Tsu06g02591 424 MobiDBLite consensus disorder prediction 382 424 - -
Tsu06g02591 424 Coils Coil 23 43 - -
Tsu06g02591 424 MobiDBLite consensus disorder prediction 382 403 - -
Tsu06g02591 424 MobiDBLite consensus disorder prediction 295 344 - -
Tsu06g02591 424 Coils Coil 156 187 - -
Tsu06g02591 424 Gene3D - 54 135 - -
Tsu06g02591 424 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 423 - -
Tsu06g02591 424 SMART iq_5 103 125 IPR000048 GO:0005515
Tsu06g02591 424 PANTHER IQ-DOMAIN 5-RELATED 1 423 - -
Tsu06g02591 424 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Tsu06g02591 424 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02591 Tsu-Chr6 33346754 33349412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02591 1 423 IQD Protein Family AT5G03040 47.414 9.89e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02591 - - lja:Lj0g3v0301539.1 503.442