Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02580 ATGCAGCTAACAACAATGGCGCTTGAGGTGTTCATGTGTGGTTGTGTCTGGCTCTTTTCATTCATtccctcttctctctctcggttCTCTTTGTCCTCATCCCTCTTCTTCCTCACTTTCTCGCCGGATTTTCCCGAGAAAATTACAACCACAATTCCCGGGAAAATTTCTTCAACCTTGAACAACAATTCCATCTTCCGCATCAAATTCAGGTGCTGTTTAATTGTTGATGACCAATGGAGAGGATCTTCTTCTTATAATAACCGGTCGCGTGAGTTCAATCGTGGTAGTGATTATCGGAGACTAGGAGGTCATCGTAAGCAGGGTAGTTGGCAGCTATTTCCAGAAGAATCTGGTCATCGGCACATGATTTCTCGATCTTGTGACAGGAGGCTGGAGGAAGATAATTATCGCCCGTCATTCTCGCGAGGGGATGGAAAGTATGGAAGGGGCAATAAGGAAAGTAGAGGAGCCTTTAGCCAGAGAGAATGGAGAGGGCGTTCATCGGAAACCACAAACAACTCTCTGAATATGTCCAGGAGGCAAACCAATGCAAGTAATGATCGCAAGTCAGTCGATGATATGCTAACATATTCCTCTCATTCACATTCTGACTTAGTAAATACTTGGGAGCAGCATAACATTAATGACCAGCATGATAAGATGGGTGGTGTTAATCGGTTTGTTACAGGCCAGAGAAATGATAGGGATAGTTCTTTGGGTACAATTGACTGGAAGCCCCTTAAATGGACCCGGCCTGGATGCTCCTCTTCACGAGACTCAGGCTTTAGCCGCTCAAGTGGCATGAGGAGCTTAGGAGGGACAAATTCGAAGGGAAGCTGTGAATGGAAGGTTGGGTTGCAACAAAAAATTGCAACTGCTGTTGAGTTAAATTCAGGGGAAGCTGCTACATGTCGAGCATCGTCTGCTCCATCTGAAGAGGAAAATTTGAGGAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTTTGAGAGAAAGCATGTTGAGGGGCCTGAGGTAACTTCAAACAATGATGACCCTGTCTCACCTCCTTTCAGTATAGAAACCAATAATTTCCTCAGTACTGGTTTAGTAGATAGAAGCCCTAAAGTTTCAGGACTCTCAGGTTGTGCATCTCCTGCAACTCCATCTTCGGCAGCCCGCTGCTCTTCACCAGCAGGTGCAGATGATAAATTGTTTGGAAAAGCTGCAAACGTGGACAGTGATGTTGGTAACTTTAGTAGTTCACCTGTTCATGGGTCTCAAAATCATCTGCAGATGTTTTCTTTCAATTTAGAGAAGGTGGATATTGACTCATCGATTAGTCTGGGCTCTCCACTTGTTGAGTTATTACCACAGTCTGATAATCTGAGCTCTGTGGATTATAGTTTATTAACTTCCACCACAATGGATAAGCTGCTGATATTGAAAGCGGACATTTCAAAGGTATTAGAGGTCACTGAAACTGAAATTGATTTACTTGAAAATGAACTTAGATCTCTAAAATCTGAATCTAAGGATAGATTTCAATGTTCAGAAGCAGTTGGCTCTCTGCTAATTCCCTGTACTTATAGGCATGTTGCCAATGTCTCGGCTTGTGGTGATAGTGATTCATCTTTGGAGGTTAAAGATGGTGTAGATGTTAAGTCTAGTGCGAGCACTAGGGATGTTTTATACGATACAATTATTTCTTGCAATGAAAAAACTGCAAAAGCAGCATGTGAAGTGTTTGATAAGTTATTGCCTGAAAAATGTTGCAAGAACGAGAATATTGGGGCTAGCAGTGGTTCATCCTCTCATAATGGCACACTTATTAAGGAAAAATTTGCTGAGAGAAGACGATTGGCAAGATTGAAGGAAAGAATTATAACACTCAAGTTTAAAGCATTGCATCACTTGTGGAAAGAAGATATGCGTTTACTGTCTATTAGGAAACACCGCCCAAAATCTCACAAGAAACTTGAATCAGAGCTACGCACCACCAGTAATAGTCATCAGAAGAAGCGGTCTTCTATTCCTTTCCGTTTTCCCTTCCCTGCAGGAAACCAACTGAGATTGGTTCCAACTTCCGAGATGATCAAGTATACAAGCCAACTGATTTCGGAATCCAAACATGAAATTCACAGAAGCACCTTGAAGATGCCAGCATTAATTTTGGATCAAAAGGACAAAATGTATTCAATGTTTTTATCTTGCAATGCGCTGGTTGAAGATCCAGTGGCTATTGAGAAAGAAAGGGTCATGATAAACCCTTGGACTGCAGAAGAAAAAGATATTTTCTTGGAGAATTTTGCTGCCTATGGAAAAGATTTTCGGAAAATTGCTACTTTCCTTGACCACAAGACAACGGCTGACTGTGTTGAATTCTACTACAAAAATCATAAGTCTGCTTGTTTtgagaaaattaagaaaaaagatGATGACAAGTTAGGGAAAATTTTCAAAGCCAAAACTGACTTGATGGCATCAGGTGTAAAATGCAACTCTGAAGTGAATGCTTCTTCACTTGATATTTTGAGTGAAGCTTCTTCAGTGATGGCAGACGACATTGCACGTAATCGGAAAATGCGTTCAGGAAGTTCCTTATGGAGGGGATATAATAATAAGGCCATGTCAAGGGGTGAAAGTATCATTACAGAGAGGCCGGACCGTTTTGACGTTCTTCAAGATGAAAGAGAGACTGTTGCAGCTGATGTATTGGCTAGTATATGTGGTTGTCTTTTATCCGAGGCAACGAGTTCCTGCATAACTAGTTCAGTTGATCCCGTGAAAGGTAAAAGGGTCCTCAAGAAGTGCGTAAAAGCGAAGCCTCTATCCAAAAAACCTCCGATGCCAGACATTACTCAAAATGTTGATCATGAAACTTGTTCCGACGAGAGCTGTGGTGAAATGGAACTAACTGATTGGTCAGATGTGGAGAAGGCAGCCTTTCTTCATGCTGTATCATTGTTTGGTAAGGATTTTGCAATGATTGCACAGCGTGTCAGAACAAGATCCCAATACCAGTGCAAAGTGTTTTTTAGCAAGACTCAGAAACGTCTTAGATTGAATCGCATGGGTCAAAGACCTGAAAATGTTGGATCACAGGTAAATGATGATGTGGATGGTGGCAGGAGTGATGCAGATAATGCATGCGTTGTAGAGACAGGTTCAGCCAATGGCTCTGATTTGTCAGGCACTAAAACAGGTGTGGACCAGCCTGAATCTGATAAGAACATGTATCATGATGAATCCAATCCTGTAGAAGCTAGCAACCTGTCAGCTGACTTGTATAAATCAGAGGAAATTAATAGGAAAGTAGATCATGAAGATGTAAATATGGTTTCTAATGCATGTGTGATTGGTGGTGAATCTAAACCGTGCACTGATGGTAATGTAGGTGTCCTGAATGGTTCTGATAGGTCCGGTTCTGTCCGGGAGCAGAGAGCCATAGTTATGTCAGATAGCATAGAAATTGGAAAAGATGAACCAAGTGAAGGAGGAGGTGCAGTTACAGAATTGGTGTCTGGTACGGGGACAATGGAACCATGCTACTCTAATTCTGTTGCTGAGGATAGACTAGTTTCTGACGTTTCTTCTGCACAACAGGGAAATGAATTGGAGGGTTCAACTATATGTCTAGTTGACAGAGATGAAGCTGATACAGATGTTGTGATTGAATTGAAAGGCAATGTCCACGATTCAAGCACTTTGGTGAATACTTCACTTTCATCTGTGGATGTTTCTTGTCCAAGATTGAGTGTTGAAGCTGAAAATGAGCCCCAACTATGCCTTGAAAAACCTCAATTCTCAGGATCATCAGAGGGCCCTCTCACTGATGCAACTTCAACATTGAAATATACTGATGCTGCTGCTGTGCAATACAAGAAAGCATCTAGCCAAGATCTACCGTCTTGTGATTTTCAGGGTAACCAAGATATGATTGGACACAATTCCAGTAGCAATCTTGGCCATCAGCTTTGTAATCCTGGGAGTTCACTGGACCATGTTGAGGCTGCTAGAGTCCTTCAATGCTATAATTTGCAAGCGCCTTCTGAGAAGGAAGTGAATGTGAATATGAGCTGCAGCAGTTCAGCTACTGAGTTGCCACTTTTGTCCCAAAAGATTGATTTAGAAGAACCACCCAGAAATGATGTGAAAATATTCGGAAAGATACTAACCAATCCTACATCCACCCCGAAGCCCAATTTAAGTGCAAAGGGAAATGAAGAAAATGGTACCCATCATCCGAAGTTAAGCAGTGGCTCTTCTAGTCTGAAATTAACCGGCCATGATAATACTGGTGGAAAATCAACTATTTTGAATGTTGATCTTAATGACTGCCGGGTCTTTGAAAATGTTCCTGTTATAAGAAGTTCTAGCGATGGGAACAAAATACAGCCAGTTTTCTCATCACTCCCTGATTCTGCCATTTTGCTTGCCAAATATCCTGCTGCATTTGGTAGTTATGGTCTTGAAGCAGTCTCAAGTTTACAGCAGCAGGTTACAGAAATGGTAGCTTCAAATGGTTTTGGTGAACCAGGGATTCTTGCAGGTGGATCCAAAAGTGTTGCCTCAGATCATATAGCAGCCACCAAAATACATCAGACCAATGCTGACCAGTTTGTTGGTCAAACTGGGAATGCCATAAAAGAAGATGAACCTGTGGGAGAGAAAAGGGATTTGAATAGTTAG 4680 0.4158 MQLTTMALEVFMCGCVWLFSFIPSSLSRFSLSSSLFFLTFSPDFPEKITTTIPGKISSTLNNNSIFRIKFRCCLIVDDQWRGSSSYNNRSREFNRGSDYRRLGGHRKQGSWQLFPEESGHRHMISRSCDRRLEEDNYRPSFSRGDGKYGRGNKESRGAFSQREWRGRSSETTNNSLNMSRRQTNASNDRKSVDDMLTYSSHSHSDLVNTWEQHNINDQHDKMGGVNRFVTGQRNDRDSSLGTIDWKPLKWTRPGCSSSRDSGFSRSSGMRSLGGTNSKGSCEWKVGLQQKIATAVELNSGEAATCRASSAPSEEENLRKKPRLNWGEGLAKFERKHVEGPEVTSNNDDPVSPPFSIETNNFLSTGLVDRSPKVSGLSGCASPATPSSAARCSSPAGADDKLFGKAANVDSDVGNFSSSPVHGSQNHLQMFSFNLEKVDIDSSISLGSPLVELLPQSDNLSSVDYSLLTSTTMDKLLILKADISKVLEVTETEIDLLENELRSLKSESKDRFQCSEAVGSLLIPCTYRHVANVSACGDSDSSLEVKDGVDVKSSASTRDVLYDTIISCNEKTAKAACEVFDKLLPEKCCKNENIGASSGSSSHNGTLIKEKFAERRRLARLKERIITLKFKALHHLWKEDMRLLSIRKHRPKSHKKLESELRTTSNSHQKKRSSIPFRFPFPAGNQLRLVPTSEMIKYTSQLISESKHEIHRSTLKMPALILDQKDKMYSMFLSCNALVEDPVAIEKERVMINPWTAEEKDIFLENFAAYGKDFRKIATFLDHKTTADCVEFYYKNHKSACFEKIKKKDDDKLGKIFKAKTDLMASGVKCNSEVNASSLDILSEASSVMADDIARNRKMRSGSSLWRGYNNKAMSRGESIITERPDRFDVLQDERETVAADVLASICGCLLSEATSSCITSSVDPVKGKRVLKKCVKAKPLSKKPPMPDITQNVDHETCSDESCGEMELTDWSDVEKAAFLHAVSLFGKDFAMIAQRVRTRSQYQCKVFFSKTQKRLRLNRMGQRPENVGSQVNDDVDGGRSDADNACVVETGSANGSDLSGTKTGVDQPESDKNMYHDESNPVEASNLSADLYKSEEINRKVDHEDVNMVSNACVIGGESKPCTDGNVGVLNGSDRSGSVREQRAIVMSDSIEIGKDEPSEGGGAVTELVSGTGTMEPCYSNSVAEDRLVSDVSSAQQGNELEGSTICLVDRDEADTDVVIELKGNVHDSSTLVNTSLSSVDVSCPRLSVEAENEPQLCLEKPQFSGSSEGPLTDATSTLKYTDAAAVQYKKASSQDLPSCDFQGNQDMIGHNSSSNLGHQLCNPGSSLDHVEAARVLQCYNLQAPSEKEVNVNMSCSSSATELPLLSQKIDLEEPPRNDVKIFGKILTNPTSTPKPNLSAKGNEENGTHHPKLSSGSSSLKLTGHDNTGGKSTILNVDLNDCRVFENVPVIRSSSDGNKIQPVFSSLPDSAILLAKYPAAFGSYGLEAVSSLQQQVTEMVASNGFGEPGILAGGSKSVASDHIAATKIHQTNADQFVGQTGNAIKEDEPVGEKRDLNS 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02580 1559 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 78 517 - -
Tsu06g02580 1559 Coils Coil 479 506 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 136 189 - -
Tsu06g02580 1559 Pfam Myb-like DNA-binding domain 970 1010 IPR001005 -
Tsu06g02580 1559 Pfam Myb-like DNA-binding domain 753 794 IPR001005 -
Tsu06g02580 1559 Gene3D - 730 802 - -
Tsu06g02580 1559 SMART sant 967 1015 IPR001005 -
Tsu06g02580 1559 SMART sant 750 798 IPR001005 -
Tsu06g02580 1559 SUPERFAMILY Homeodomain-like 737 797 IPR009057 -
Tsu06g02580 1559 ProSiteProfiles SANT domain profile. 966 1017 IPR017884 -
Tsu06g02580 1559 SUPERFAMILY Homeodomain-like 969 1017 IPR009057 -
Tsu06g02580 1559 Gene3D - 929 1027 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 1020 1071 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 136 163 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 254 277 - -
Tsu06g02580 1559 ProSiteProfiles SANT domain profile. 749 800 IPR017884 -
Tsu06g02580 1559 CDD SANT 971 1009 IPR001005 -
Tsu06g02580 1559 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 530 1503 - -
Tsu06g02580 1559 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 78 517 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 164 189 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 1387 1428 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 650 671 - -
Tsu06g02580 1559 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 530 1503 - -
Tsu06g02580 1559 MobiDBLite consensus disorder prediction 1048 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02580 Tsu-Chr6 33272620 33283543 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tsu06g02580 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02580 - - cam:101505283 1371.3