Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02573 ATGGCTTGTAACACATTGATGAGTTCAGCTATCTCAGCTTTTCCATCACTTCTTTCTTCATCAAAATCAAGATTTGCAAATTCACTTCCACTTTCAAGTTTTGCTTGCAATgcatcttcttcttctaaattCACTATGACTGCTGATAATTGGATGCCTGGTCAGCCTAGACCACCTTATCTTGATGGTTCAGCTCCTGGTGACTTTGGATTTGATCCTCTTCGTCTTGGCGAAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCTGAACTCATTCATTGCAGATGGGCAATGCTTGCTGTTCCAGGGATTTTGATACCAGAGGCATTAGGGTTAGGAAATTGGGTAAAAGCACAAGAATGGGCAGCCCTTCCTGGAGGACAAGCAACCTACCTAGGTAACCCTGTTCCATGGGGTACCCTACCTACCATTTTGGTCATTGAATTTCTTTCTATTGCTTTTGTTGAACACCAAAGGAGTATGGAGAAAGACCCTGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTAGGTTACTCTAAAGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAGTTAAGAATGGACGTCTTGCTTTGTTAGCTTTTGTTGGAATCTGTGTTCAACAATCAGCTTATCCAGGAACTGGACCTTTGGAGAATTTGGCTACTCATTTGGCTGATCCATGGCACAACAACATTGGAAATGTTCTTATTCCCCCACAATAG 735 0.4054 MACNTLMSSAISAFPSLLSSSKSRFANSLPLSSFACNASSSSKFTMTADNWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGNVLIPPQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02573 244 SUPERFAMILY Chlorophyll a-b binding protein 46 240 - -
Tsu06g02573 244 Gene3D Chlorophyll a/b binding protein domain 52 238 - -
Tsu06g02573 244 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 24 237 - -
Tsu06g02573 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 24 237 IPR001344 GO:0009765|GO:0016020
Tsu06g02573 244 Pfam Chlorophyll A-B binding protein 58 212 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02573 Tsu-Chr6 33185703 33188719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02573 1 199 Chloroplast and Mitochondria Gene Families AT3G54890 78.607 4.29e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02573 K08907 - gmx:100800350 439.499