Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02570 ATGGAGAAGAATCTTGATGAACAATCCATCCCTCAGAAAGATGAGGAAAACAACACTAATGTTGATGATACCTCTAAATCATCGTTGTCGGAGACCAATGATAACGTTGAAGTCAAACCGGAcgatgaaaataaaaatgtggaTGATGTAGTTCATGTTGAGGGAGAGCCAAAAGAGGAGAAGAAGGAGGAGAAGGAGAGTGAGGAAGGTGTAACCGTCGAGGTTACATCACCTGAAACTCCTCCTAACTTGGAGAAGGTTTTAGAGGACATTGATCGATTCCTAGCGATAAATgagaacaataacaacaatgtCAATCCCAACGAAGAAAAGATTCCTGAATGTGTTGACAAGTTTTTGGATCTCGTGGAAGAGAAAATTACGAAATATGATTCTGGTGAAACAAAGTGGGGTGAGGTCATGGAGGAAGATTCATCGTTGTTGGAAGGTGTGAATCGTGTTTCGAAGATGGTGAAATTGTTGAGCACAATGATCATAGAGTTTCAATATGGAGAAAAGGAAGCAGAAGGAGATGcagaaaaggaaaatgaaaaagaaaaagatgagaaaaaggaaaaaagggaTCAATTAATGTTGGTGAACCGTGTTGGTGCGATTCAACAACGAGCCATGTCATATTTGGAGGAAGAGTTTCGAATGTTAATGGAAGAATCTagaaaccaaaataaaacaGACTCTGACTCGAAAGGGAAAAATGTGGCAACATCAGAATCTTCGGAAAATGAATCGACAGAGATGGTTATGGAGTTCCCGGGTTTTAAGGAGGAGGTCATTACAAGTTTGAATAAGATAGCATGTGAGATGTTATTCGCGGGTTATGATTCAGAGTGCTACCACATCTACACTGTTTCTAGAAAACACGGTTTCAATGACGGTTTAAACAAGCTTGGGTATGAAAGGATTAGCATGGATGAGGTTCAAAAAATGCAATGGGAATCATTGGAGAGAGAGATTCCATCGTGGATCAACACATTCAAGGAATGCGCCACTGTGTGGTTCCCCGGTGAACGTAAGCTTGTTGCATCAATTTTCTCCGATAATCAATCGGTTGCAGACACACTCTACACTGAACTCACACGTGTGGTGGTGTTTCAGCTTCTCAACTTTGCAGAAAGCGTTGCGATGACAAAACGCGCTGCAGAGAAGCTCTTCAAGTATCTTGACATGTATGAGGCATTAAGAGACACAATTCTAAATCTCGAGAAACTTTACCCGGAGAACATCGTTGATGATATCAAAGCTGAAATTACTTCGGCCAAGAATAGGCTCGGGGAGGTTGCAGTGTTGATATTTTGCGAACTTGAAAACTCGATCAAATCTGACTCTGGTAAAACACCCGTCGCTGGTGGCGCAGTTCATCCGTTAACTCGCTACATAGTGAACTATCTGAGACTTGCATGCGAGTATAAAGACACATTGGAAGAGGTTTTTCGAGAGCACTCGAAAATTGAGCGTGCTGATTCAACAAGTAGGCCACATTACGAAAATGACAATCAACAGTCGAAGGAGAAAGAAAACACATCACCATTTGCGGCACAATTGACACGTGTAATGGAATTACTCGACGCAAATCTTGAAGGAAAAGCAAAACTCTACAAAGAAGTACCATTAAGTTGCATCTTTATGATGAACAATGGAAGGTACATTGTTCAAAAAATCAAAGGCTCGGCTGAAATCTATGCAGTGATGGGCGAAACTTGGTGTCGTAAGAGATCAACTGAGTTGAGAACTTACCACAAAAACTATCAAGTAGAAACATGGAGTAAGATATTAACTTGTTTAAGTCcaaaaggtttgagtgataaCGGGAAAGTTCCGAAGCCAGTGTTGAAAGAAAGGTTCAAGACTTTCAACGCATTGTTTGATGAGATACATAAGACACAAAGCACATGGGTTGTGAGTGATGAACAACTTCAATCTGAGCTTAGAGTTTCAATATCAGCACTTGTGATTCCTGCTTATAGATCATTTTTGGGGAGGTTTTCACAGTATTTGGATCCAGGGAGACAAACTGAGAAGTATATTAAGTTTCAAGCTGAGGATATAGAGAATTACATTGATGACTTGTTTGACGGGAACCCTCATACAGCCCAGGTCAGGAAGAAAGCATGA 2133 0.3882 MEKNLDEQSIPQKDEENNTNVDDTSKSSLSETNDNVEVKPDDENKNVDDVVHVEGEPKEEKKEEKESEEGVTVEVTSPETPPNLEKVLEDIDRFLAINENNNNNVNPNEEKIPECVDKFLDLVEEKITKYDSGETKWGEVMEEDSSLLEGVNRVSKMVKLLSTMIIEFQYGEKEAEGDAEKENEKEKDEKKEKRDQLMLVNRVGAIQQRAMSYLEEEFRMLMEESRNQNKTDSDSKGKNVATSESSENESTEMVMEFPGFKEEVITSLNKIACEMLFAGYDSECYHIYTVSRKHGFNDGLNKLGYERISMDEVQKMQWESLEREIPSWINTFKECATVWFPGERKLVASIFSDNQSVADTLYTELTRVVVFQLLNFAESVAMTKRAAEKLFKYLDMYEALRDTILNLEKLYPENIVDDIKAEITSAKNRLGEVAVLIFCELENSIKSDSGKTPVAGGAVHPLTRYIVNYLRLACEYKDTLEEVFREHSKIERADSTSRPHYENDNQQSKEKENTSPFAAQLTRVMELLDANLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKGSAEIYAVMGETWCRKRSTELRTYHKNYQVETWSKILTCLSPKGLSDNGKVPKPVLKERFKTFNALFDEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDIENYIDDLFDGNPHTAQVRKKA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02570 710 Coils Coil 172 196 - -
Tsu06g02570 710 SUPERFAMILY Cullin repeat-like 199 698 IPR016159 -
Tsu06g02570 710 MobiDBLite consensus disorder prediction 173 193 - -
Tsu06g02570 710 MobiDBLite consensus disorder prediction 1 83 - -
Tsu06g02570 710 Pfam Exo70 exocyst complex subunit 327 695 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu06g02570 710 MobiDBLite consensus disorder prediction 234 252 - -
Tsu06g02570 710 MobiDBLite consensus disorder prediction 224 253 - -
Tsu06g02570 710 MobiDBLite consensus disorder prediction 491 509 - -
Tsu06g02570 710 MobiDBLite consensus disorder prediction 491 514 - -
Tsu06g02570 710 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 701 IPR004140 GO:0000145|GO:0006887
Tsu06g02570 710 MobiDBLite consensus disorder prediction 1 21 - -
Tsu06g02570 710 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 59 701 - -
Tsu06g02570 710 MobiDBLite consensus disorder prediction 35 72 - -
Tsu06g02570 710 Gene3D Exocyst complex component Exo70 177 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02570 Tsu-Chr6 33162536 33164668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02570 15 710 EXO70 exocyst subunit family AT5G13990 48.093 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02570 K07195 - gmx:100819960 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00520 04 4849174 4851024 Tsu06g02570 06 33162536 33164668 PCT