Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02566 ATGGATCATTCTCTCATCCCAAGCTTCCTCTACTCCTCTACCTCATTGCCGCAGAAGAAGATCGTAGATGATGTTTCCACCATCCATCATACGGCGATGGAATCTTCGAAATTTATGATTCCTTCTCCCAGTGAGTCTGGAAGAAGGAATATAAAATTGTTCTCTCGTGATTATTATCTCGCTTGTGCCGTTGGTGGAAGTATATGTTGTGGTTTCACTCATATGGCAGTTACACCTCTTGATCTTGTCAAATGTAATATGCAGATTGACCCTGCAAAATATAAGAGCATCTCCTCTGGATTTGGAGTGATGCTAAAGGAACAAGGATTTAGAGGATTTTTTAGAGGATGGGCACCTACATTTCTTGGTTATAGTGCACAAGGTGCTTTCAAATATGGACTCTATGAATATTTCAAGAAGTACTATTCAGATGCTGTTGGTCCAGATTATGCTACAAAGTATAAGACATTAATCTACCTTGCTGGATCAGCATCTTCTGAGGTTATTGCTGATGTTGCACTTTGTCCATTTGAAGCAATTAAGGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGCCTTTCTGATGGGTTACCTAAATTGCTCAGATCTGAAGGAGTTTCAGGGTTGTATAAGGGAATTGTGCCTCTTTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCATATGAAAACATTGTTGAGATGATCTACAAGCATGCCATTCCCACACCAAAAGATGAAACCAGCAAAACCCTACAACTTGGTGTGAGTGTTGTTGGTGGATATTTAGCTGGTATATTATGTGCTGTTGTCTCTCATCCTGCAGACAATCTTGTCTCTTTTCTCAACAGTTCCAAAGGAGCAACTGCTGCTGATGCTGTAAAGCAATTGGGATTATGGGGTATGTGTACACGTGGTCTCCCTCTTCGTATTCTTATGGTGGGAACTCTAACCGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTTTCTGTTGGCttGCCAACAACCGGTGGTGTTACTCCTGCTCCAGCTTCTTAG 1050 0.4143 MDHSLIPSFLYSSTSLPQKKIVDDVSTIHHTAMESSKFMIPSPSESGRRNIKLFSRDYYLACAVGGSICCGFTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVMLKEQGFRGFFRGWAPTFLGYSAQGAFKYGLYEYFKKYYSDAVGPDYATKYKTLIYLAGSASSEVIADVALCPFEAIKVRVQTQPGFARGLSDGLPKLLRSEGVSGLYKGIVPLWGRQVPYTMMKFASYENIVEMIYKHAIPTPKDETSKTLQLGVSVVGGYLAGILCAVVSHPADNLVSFLNSSKGATAADAVKQLGLWGMCTRGLPLRILMVGTLTGAQWGIYDAFKVSVGLPTTGGVTPAPAS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02566 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 154 238 IPR018108 -
Tsu06g02566 349 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 2 348 IPR044677 GO:0005315|GO:1990547
Tsu06g02566 349 PANTHER PHOSPHATE CARRIER PROTEIN 2 348 - -
Tsu06g02566 349 Pfam Mitochondrial carrier protein 59 144 IPR018108 -
Tsu06g02566 349 Pfam Mitochondrial carrier protein 157 242 IPR018108 -
Tsu06g02566 349 SUPERFAMILY Mitochondrial carrier 58 330 IPR023395 -
Tsu06g02566 349 Gene3D Mitochondrial carrier domain 58 333 IPR023395 -
Tsu06g02566 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 141 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02566 Tsu-Chr6 33109443 33113029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02566 3 348 Chloroplast and Mitochondria Gene Families AT5G14040 68.320 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02566 K15102 - twl:119993760 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02850 07 33562788 33566825 Tsu06g02566 06 33109443 33113029 PCT