Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02553 ATGGCCTTAAATAAGACAGGAAACTTGTTAGGTACCAATGCCGGAGACGAGCATGGCTTGTTTCCGCAATACAACCAACAAAAATTACACAGCGGTGTTACAAATGTACATAATAATATCCCTAAACATGTTGGGGGGAAAAATCCGGTGAATTTTGTTCATGATGGAAGAGTTCCTGTTTCACCTGATATACCTCAAAATCGCGAGAATAGGTTTGGATTGAATAAGGAGAACGGCCGTGTTAGATATGAAGACCTCACCAATATTTTAGGGTTGAAGAGAATGGATTCTGAGACTTCTTCTGAGATAGGTGATTTTATCCCTAAAAGACAGCCAGCAGCACAAGAGATTGAAAACGGTGTTTCTCCAAACATTTTATGCAAAACTCAAAAGGGAGATGACGACAACAGTGGCCGTGGTGTGTTGAGGAAGAGCTTTAGCGAAAAAATTAGTGACCAACATGGTACTAGGCCACCTGTATCACCGCCTATTTGCAGACATGAAAGATCTCATTCCAATGGATTTTCTGGTTCTGGAATTTTAGACGATTCTTTATCTTCAGGGAAAATAAAGTTTCTTTGCAGCTTCGGTGGAAAAATATTACCAAGGCCCGGTGATAGTAAACTCAGATATGTAGGCGGAGAAACCCACATTATATCTATCCGAAAGGATATTTTATGGGAAGAGCTTATGGACAAGACTTTAGGTATTTGCAGTCAACCTCACACGATCAAATACCAGCTTCCTGGGGAAGATCTTGATGCTCTAATATCGGTTTCCTCTGATGAAGATCTTCAAAATATGATAGAGGAATATCATGGACTTGAAAGTCACGAAGGTTCTCAGAAACTTCGAATATTTTTAGTTCCTTTGGGTGAATCTGAAGAGACACCGTCTACCGAGGCAAACACCGTTCTGCAGAATGATCCTGATTACCAATACGTTGTTGCTTTAAACGGCGTAATAGACCCTAGTCCTAAGAAAAACACCGGTGGACAGAGTTTGATAAACGAAGCAAATCAGCCAGTGACAACATTCAATTTTACTCCAATAATTGTGGCTTCTCCTTTGGAGACCAGGGACGGTAATAAAATTATTCGTGCTTTAAATCCAGATGGAATTTTGAATGATCCCCTAAATCTTCAAAGTGCATTGCGAATTTCTCCTACTCCGGTTCAAGTTGCAGGTTCTAGTACAAGTTATGTACAATTGCTTGGTAACAACTCATGCCAGGGAAGTATTGACAGCAATGCATCATTTGTTACCGCTCAGATAGACTCCGGAAACTCGAGCATAAATGCTGCTGATTGCCGATACCCTCAACAAGCATCTGTTACCTTGTTAAGTGACGGTCATCCTCGTCAACATGGTGACGTTGGTCCGCCGAAGAATCTCAATGGACAGTATTTTGACAACTACAATCCAGGCAATGGTTACAGTGATGAAGCTTTTGGTGGAACCTTGCATAAGGATAGAATACTCCACTCTGGAAATCCAATTGCTCAACAAGCTGAATCATATGGAACTCCTAATGATCCGCCTCATGGGATGTCTCATGCTTTTTCTGATTCGCAGTTGCAAGAGAGTGGAGCAAGGTCTGGTTACCGCTCACAAGAAGGAATTTCCCCGTCTTTCTCCTTGAACCTTGAAAAGGCTGAATTATCTTCGATGTTAGGTGTCTCACAAGTGAACCTTATGGAGGGTCAACATGATCCCTTCCTCCATCATCCTCAAATACAAAGTAAGATACCAAAAGTGGAGTCAGCTGAGATGCATAGACGGCAAGGTATGGCATCTTCATCTCCCTACTCGGAATCAGTAGGAACAAATGATCGTATTAATAAGGATAGCATTTTAACTGAGAAAAAATACCTTAATGCTCAAACTGACTTAAGTGGGTCCGGCTTTGTAGAAAAGAACATCCCGGAACATTCTTTTAAATCAGAAAGGATGATGGTAAATGAAGAAAAGAATTCTATTCCTAAGAAGGATAACAAGGTTTACGAGGGAAATTCAACTGTCAATTATATGAGTGAAATGCGTCTTTTGGATGCATTCCCTACTAATGACATAAGTGCTAAGATTGGTATGCAAAATAATCGGGAACAACCTTGTGAGGATATGCATCCTTCGTCATCAGGCATGATGGGACTCTCTCTAAATAACCTTGTGGACAAGACCCCATCTGATCTGAATGGTAAACAAGGAAATGATTTTTCAGCAAGGAACATTGATTTAAATGCTCCGATCTTAATATGTGCAGAAAGCTCATGTGGCAAAAGTTCTGAAAGAGATGATATGTTCAAGTTTTTCTTTGATCCACATTCTCTTAAATCGGCACAAATTCAGCCTTCTCAGAATCAGACCGCTACAATTTGTCATGATAATCCAACAATAAACTCTGAAAGTTTGTATCCTGCTGTACTTCATGATGATGTCCCTCCAAGCTTAAACTTGCCGGTTAGTGACCTGGATAATGCAAGCAACAACATTTCTTTTATGAAGGCGCCTTCTTTTCTCGACGACTGGCTTACAAGCACTGATCAAATGGCTGTTCATTTTAAACACGAACATTCTGCCACCGGATTGTCAAAAGTTGAAGATGTAATCTCAGGACAATCGAAATATTCAGAAAGGAGTAATGATGCAAACAGAGTGGCACCATTTGTTGCAGTTCCTTCACATCAAAAGTCTTCAATGGTACACACCCCACATAATTTTGATGAAGGTGAAAGTGATGTATCTCCATCTCATACGGAAATAGAGAGCACCATCCTAGAGTCTGATCTCGAGgATTTTAAAGACGACCAAACCGAAATGAATGACTTCCTTTCTGATGTAATGATAGCAGAAATGGAGGCGAGCATATATGGTTTGCAGATAATTAAGAATGTTGATCTTGAAGAACTTATGGAGTTAGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGGGGAACGGATGTCGCAATCAAGAGAATTAAAAAGAGCTGCTTTGGAGGGAGATCTTCTGAACAAGAACGGTTGGCAAAAGATTTTTGGAGAGAGGCACAGATCCTGTCAAATCTTCACCATCCCAATGTCCTCGCATTTTATGGAATCGTACCGGACGGAGATGGTGGAACCTTAGCAACTGTAACAGAATATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTCAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTTATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCATTCGAAGAATATTGTCCATTTCGATTTGAAGTGTGACAATTTACTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTTGTATCTGGGGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAATAGTAGCCGGGTTTCCGAAAAGGTTGATGTTTTCTCGTTCGGCATCTCAATGTGGGAGTTATTGACAGGAGAGGAGCCTTATGCAGATATGCATTGTGGTGCCATCATTGGCGGAATTGTAAAGAACACACTCCGACCACCGATTCCAGAACGATGTGATCCTGAATGGAGGAAGCTTATGGAAGAGTGTTGGTCACGTGACCCCGAACGTCGGCCATCATTCACCGAGATAACAAGCAGGTTAAGATCTATGTCTATGGCCATTCAACAAGGAAAGGGTAATCATCAGGCATGGCAGTTGAGACCTAGTAATGAACTTTGA 3768 0.4108 MALNKTGNLLGTNAGDEHGLFPQYNQQKLHSGVTNVHNNIPKHVGGKNPVNFVHDGRVPVSPDIPQNRENRFGLNKENGRVRYEDLTNILGLKRMDSETSSEIGDFIPKRQPAAQEIENGVSPNILCKTQKGDDDNSGRGVLRKSFSEKISDQHGTRPPVSPPICRHERSHSNGFSGSGILDDSLSSGKIKFLCSFGGKILPRPGDSKLRYVGGETHIISIRKDILWEELMDKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLESHEGSQKLRIFLVPLGESEETPSTEANTVLQNDPDYQYVVALNGVIDPSPKKNTGGQSLINEANQPVTTFNFTPIIVASPLETRDGNKIIRALNPDGILNDPLNLQSALRISPTPVQVAGSSTSYVQLLGNNSCQGSIDSNASFVTAQIDSGNSSINAADCRYPQQASVTLLSDGHPRQHGDVGPPKNLNGQYFDNYNPGNGYSDEAFGGTLHKDRILHSGNPIAQQAESYGTPNDPPHGMSHAFSDSQLQESGARSGYRSQEGISPSFSLNLEKAELSSMLGVSQVNLMEGQHDPFLHHPQIQSKIPKVESAEMHRRQGMASSSPYSESVGTNDRINKDSILTEKKYLNAQTDLSGSGFVEKNIPEHSFKSERMMVNEEKNSIPKKDNKVYEGNSTVNYMSEMRLLDAFPTNDISAKIGMQNNREQPCEDMHPSSSGMMGLSLNNLVDKTPSDLNGKQGNDFSARNIDLNAPILICAESSCGKSSERDDMFKFFFDPHSLKSAQIQPSQNQTATICHDNPTINSESLYPAVLHDDVPPSLNLPVSDLDNASNNISFMKAPSFLDDWLTSTDQMAVHFKHEHSATGLSKVEDVISGQSKYSERSNDANRVAPFVAVPSHQKSSMVHTPHNFDEGESDVSPSHTEIESTILESDLEDFKDDQTEMNDFLSDVMIAEMEASIYGLQIIKNVDLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFGGRSSEQERLAKDFWREAQILSNLHHPNVLAFYGIVPDGDGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSRDPERRPSFTEITSRLRSMSMAIQQGKGNHQAWQLRPSNEL 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02553 1255 SUPERFAMILY CAD & PB1 domains 206 292 - -
Tsu06g02553 1255 PANTHER SERINE-THREONINE PROTEIN KINASE 83 1247 - -
Tsu06g02553 1255 Gene3D - 208 290 - -
Tsu06g02553 1255 ProSiteProfiles Protein kinase domain profile. 967 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02553 1255 MobiDBLite consensus disorder prediction 502 539 - -
Tsu06g02553 1255 SMART serkin_6 967 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02553 1255 SUPERFAMILY Protein kinase-like (PK-like) 961 1229 IPR011009 -
Tsu06g02553 1255 Pfam PB1 domain 206 290 IPR000270 GO:0005515
Tsu06g02553 1255 Gene3D Phosphorylase Kinase; domain 1 960 1054 - -
Tsu06g02553 1255 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 83 1247 - -
Tsu06g02553 1255 Pfam Protein tyrosine and serine/threonine kinase 970 1230 IPR001245 GO:0004672|GO:0006468
Tsu06g02553 1255 Gene3D Transferase(Phosphotransferase) domain 1 1055 1253 - -
Tsu06g02553 1255 MobiDBLite consensus disorder prediction 518 539 - -
Tsu06g02553 1255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1092 1104 IPR008271 GO:0004672|GO:0006468
Tsu06g02553 1255 SMART PB1_new 204 291 IPR000270 GO:0005515
Tsu06g02553 1255 PRINTS Tyrosine kinase catalytic domain signature 1201 1223 IPR001245 GO:0004672|GO:0006468
Tsu06g02553 1255 PRINTS Tyrosine kinase catalytic domain signature 1049 1062 IPR001245 GO:0004672|GO:0006468
Tsu06g02553 1255 PRINTS Tyrosine kinase catalytic domain signature 1157 1179 IPR001245 GO:0004672|GO:0006468
Tsu06g02553 1255 PRINTS Tyrosine kinase catalytic domain signature 1086 1104 IPR001245 GO:0004672|GO:0006468
Tsu06g02553 1255 ProSitePatterns Protein kinases ATP-binding region signature. 973 998 IPR017441 GO:0005524
Tsu06g02553 1255 CDD STKc_MAP3K-like 973 1230 - -
Tsu06g02553 1255 CDD PB1_UP2 193 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02553 Tsu-Chr6 32931221 32939421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02553 187 319 MAP Kinase Kinase Kinase AT1G16270 61.654 6.59e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tsu06g02553 PK_Tyr_Ser-Thr 9.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02553 - - aprc:113862751 1609.73