Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02498 ATGGCATTGACCCTCTACTCTAGCCCAGAACACAAAAATGTTAGTATCGCTCTCATCACCGCAGAGTACTCCTTGAAGCCAGTTAAACTTGTCCCATGTACCAATGAAAGCTCTGAAATTGGGAAAATCCTTCCTATGGGGGAGaCGCAGAGGATGAAAACACTGAAACATGGTTATATTTTTCACATCCAGGGCATTGCTCGTTATaTTGCTGCATACTCCCCTTTCAactttttgtttggattttctTTCACTGATGGACTCGAAGTTGACCAGTGGATCGATTTTGCATCGACACACCTTGAGGCCGTATTTTCGTTTTTGTACAAGTCACGGTGTGGAGCAACTCACATTGACGATGAGGATGGGGTGCGGCCCGAAGAATGTACTCATTTGGAGAAATCATTGCTGGTTTTGAATACCCACCTTTCTATCAATAGTTACCTGGTTGGAGATTATGTTACCCTCGCGGACATTATAACAACTTGTGATTTGTCTTTTGGATTCACCATGCTCTTGGAAAAGAAGTACACCTCAAAGTTTCCTCATGTTGAGAGATATTTCTGGTACATGGTTAAACTGCCAAAGTTCAAAAAGATATTGGGTGATGTTAAGCAAATTGAAGTTTGGACAAGACTCACTATTATGCCTTCCAAACCTAAGAAATTTAAGCCTGCAGAAGAAGTAGTAGAGCCTTCCCAGCCTAAGATATATAAGCCTGCAGAAGTAGTAGAGCCTTCCCAGCCTAAGATATATAAGCCTGCAGAAGTAGTAGAGCCTTCCCAGCCTAAGAAATTTAAGCCTGCAGAAGAAGTAGAGCCTTCCCAGCCTAAGATATATAAGCCTGCAGAAGTAGTAGAGCCTTCAAACAAGACAACATTGGATGAGTGGAAAACTTTATACTCTGACTATTGTGAATCAAGAATCACCACAATTAAAGGATTCTGGAACATGTATGATCAAGAGAAATACTCTCTCTGGTTCTGTAATTACAAATACAATGACGAGAACACTGATTCCTCGGAAGCATGGAAAAAGGTTTGTGGATCTGTTCAGAAGATGGTTTGCAATTATGCATTTGGAAGGATGTTTTTGATTGGATCACAGCCACCATTTAAGGTGAAGGGGCTGTGGCTTTTCCATGGTCAAGAAATTTCACGGCTTATCATTGATGACTACGAATGGAAAAAAGTTGACATCTCTGATAAAGCTCAGGAAATGCTTGTCAATCAGATTATTGAAGGGATTCAACTATTTGAGGGAGAGCCTGTTTTGTATGATAAGTTCTTTAATTGA 1296 0.4012 MALTLYSSPEHKNVSIALITAEYSLKPVKLVPCTNESSEIGKILPMGETQRMKTLKHGYIFHIQGIARYIAAYSPFNFLFGFSFTDGLEVDQWIDFASTHLEAVFSFLYKSRCGATHIDDEDGVRPEECTHLEKSLLVLNTHLSINSYLVGDYVTLADIITTCDLSFGFTMLLEKKYTSKFPHVERYFWYMVKLPKFKKILGDVKQIEVWTRLTIMPSKPKKFKPAEEVVEPSQPKIYKPAEVVEPSQPKIYKPAEVVEPSQPKKFKPAEEVEPSQPKIYKPAEVVEPSNKTTLDEWKTLYSDYCESRITTIKGFWNMYDQEKYSLWFCNYKYNDENTDSSEAWKKVCGSVQKMVCNYAFGRMFLIGSQPPFKVKGLWLFHGQEISRLIIDDYEWKKVDISDKAQEMLVNQIIEGIQLFEGEPVLYDKFFN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02498 431 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 279 431 IPR001662 GO:0003746|GO:0006414
Tsu06g02498 431 CDD GST_C_EF1Bgamma_like 89 209 - -
Tsu06g02498 431 SUPERFAMILY GST C-terminal domain-like 69 208 IPR036282 -
Tsu06g02498 431 Pfam Elongation factor 1 gamma, conserved domain 284 384 IPR001662 GO:0003746|GO:0006414
Tsu06g02498 431 SUPERFAMILY eEF1-gamma domain 288 427 IPR036433 GO:0003746|GO:0006414
Tsu06g02498 431 Pfam Glutathione S-transferase, C-terminal domain 124 194 IPR004046 -
Tsu06g02498 431 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 281 431 IPR036433 GO:0003746|GO:0006414
Tsu06g02498 431 SMART EF1G_2 281 384 IPR001662 GO:0003746|GO:0006414
Tsu06g02498 431 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 83 213 IPR010987 -
Tsu06g02498 431 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 430 IPR044628 GO:0004364
Tsu06g02498 431 Gene3D - 78 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02498 Tsu-Chr6 32013181 32016032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02498 1 430 Eukaryotic Initiation Factors Gene Family AT1G57720 40.991 8.94e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02498 K03233 - qsu:112017122 333.183