Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02459 atGAGTGATGTTAGTGTGAATGGTTCTTCTTCATGTTTAGCAATAACTGAGAAGAATAATAATCAAAAGCAAGATGGTAGTTGTGTTGGCATTTTCTTTCAACTATTTGATTGGAATAAAAGACTCACAAAGAAGAGATTTTTCACCAAGAAACTTCTTCCTCCTGTAAATACAAAACAAGATTCTTTGAAGAGGTTTAAAGGTGATGAGAAAATGCCTAATTCTAAGCTCCATTTGaTTGCAAATGGGAACAATGTCGGTTTCACCAACACGGAAAAAGGTGAAAATTGTGTTATAGAGGTTGAACAACAAAAGCATGAAATGAAAGTACCGAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAGCTTCAAAGAGAGATAAGTCGGAGAAATCTTCCTTTTCTGATAGTGATGATGGAGAGGAGTCTTTGGAAATCGGGGTTGCAAATGCAAGGCATGATTCAAGGCCTCAGAAGCTTCGGAAAACGGAGGCAAACGAGAGAAGGGCAGTGACTAGGTTTGGTACGGAGGCATTGCAAATCAAGAGTGTTTTGTCGCAAGTGAGAAAGtataatcatcatcaacatcatacGAATAAACTTGTTTCGCCTTTGAAGAGTCCGAGAATTTCTTCCGGAAAGAGCGGCTCTCGAAGCTCAAGGTTGATAGAAGCAGCTAGTAAGATCTTGGAACCTGGCTTGCAGCCTACAAGCAGATCCAAATCTTCTCTTACATCTTCCATTTCTAAGTTTCCTCCCAGTAATGGCATTGCCATCGAAACGGTTGGAGCTCGGCCGCAAGATATACACAACCAATCGTGTTATAATGCCGTAGACAAGTCAATGGTGGAGCATACTTGCCAAAATTGCGGCAATTTGCTTGATGTTGATATCAGTAGAACTTCTCATGATATCACTGATTTCTCTTCGGCATTGACACAAAATGGAAGATTATTCAGTCCTTCTCATGAAAATGATGTAGTTCTTCTTAGAAGTCAAGAGAAGATCATAACTCTTGTTGATGAAGATGTTAAAAAGAATGCTTATTCTTGTAATGAATTCACTTCCATAAGAATACCTGTGCCGGAAAAATGGAATTTGTCACGCCAACTGCTTGGAGGCTTAGAGGACGATGACACATCTTCTTTCGCCTTAAGACACAAAACTCAAACGCAGGAACGAGTATTAAGCGGTgataaaatgttatttgaatTTGGATCTAGAACAAGTAATATGCAAGAGAAGAGAGTTTCGTCTGCTGCAACTGCAAGTACTGCGAATGTAAATAAAGATTTTGTTCGTTTGAATCAAAGTCTAAGTGGTCGGAATCGGACAAGGTCTCCTACCAAGTTGGATAGCCGCAAATTTGATCATGAGAGGAAAAGAAGGACATTGAATGTCTCACAAGTTGATGATACATCTTCTGTCAATTTGGTTACATCGGAACAAAGAAATGTTAGTTTTGATGCAAATGGAGGGAAAAGGAGGAGTTTTGATGCTTTCTCTTCAAACAATTCTAATGTCAAAAGTAAACGAGGCGATTATCGAAAAACTGATAAGATCAATAGGGTAGTTTCATCTACCTTTAGTTCACCTcttaagaaaaaggaaaaaacaagaAGTGATTATGAGATTAAGACTTGTTTCCAAAGACATAATCCACCCTTGAGAGAAGATGTTATAGGTGCTTTTCTAGAACAGAAGTTGAAAGATTTAAGGTCTAGAGAAAATAAGGAGTTGGTTAATGGTGATCAACCTAAAAGATCATCTGCTTTGATTCTTCAAGAATTGATATCTGTTCTGAATGTGGAGCGTCTAATATGTACCGATGATCGTACGTTCAATGACAAAAATCACAAGTATGAAAGAAAACATGTTGGATTATGTGGAACTTCTTGCAATGGTAATCATCTCAGTCCAGGATCAGTCCTAGAAGCTTCCTTTTCTTCTAGTAGTCTTGAAGAAAGCTCAGGGCATTGTTTTCATCCCGACTCTATAAATTGTTCGTACGATCAACCAGAACGGTTGAAACATGAAGCCAGACTTTTAAATTCTGAAACATCATTTAACATTGGGAAGATAGGTTATAAGATACTGACTGAACTCGTTAACCGAATTCATAGTATTTTGCAAAGTTTAGATTctttttggacaagatcaaCAGAAAGTAAGCTCAATCATATGACAGAAGTTATCTTCAATGCTGAATTGATTCTTGGAAATGTGACTAGGCACAGTGAGGAAGAAGTGGTGCCACAGCTTCTCATTTCTTGCATTCTTGATGAACTAGACGACATTGCAACCGATGCTATGCTGAGAAATTTCAGCCAAAGCGAAATAAAGGGATTTCTATTCGATTGTGTAATCGAGTATCTAGAATCAAATTGCTTCCAACATTATTACAATGTATTTAGGTCATCGTGTGCGCGGACGAAGATTCCTTTATGCATGAAAGCCGAGATTTTGGTTCAAGAGGTGAAGAGTGAGATTAAGAAGTGGGAATTTTTAGCAGGAATGGAACCAGATCAAATAATAGAATGGGAGATGAGTCACTCATTGGGGAAATGGACAGATTTCAACATTGAAGCTTTTGAGTTTGGTGTTGATATTGGTGGGGATGTGCTTCAAATTTTGCTTGATGAAATTGTTGAAGACCTTGGAAATTTCAAGAAAGTTGCTGTTTGA 2691 0.3716 MSDVSVNGSSSCLAITEKNNNQKQDGSCVGIFFQLFDWNKRLTKKRFFTKKLLPPVNTKQDSLKRFKGDEKMPNSKLHLIANGNNVGFTNTEKGENCVIEVEQQKHEMKVPSLVARLMGLESIPASKRDKSEKSSFSDSDDGEESLEIGVANARHDSRPQKLRKTEANERRAVTRFGTEALQIKSVLSQVRKYNHHQHHTNKLVSPLKSPRISSGKSGSRSSRLIEAASKILEPGLQPTSRSKSSLTSSISKFPPSNGIAIETVGARPQDIHNQSCYNAVDKSMVEHTCQNCGNLLDVDISRTSHDITDFSSALTQNGRLFSPSHENDVVLLRSQEKIITLVDEDVKKNAYSCNEFTSIRIPVPEKWNLSRQLLGGLEDDDTSSFALRHKTQTQERVLSGDKMLFEFGSRTSNMQEKRVSSAATASTANVNKDFVRLNQSLSGRNRTRSPTKLDSRKFDHERKRRTLNVSQVDDTSSVNLVTSEQRNVSFDANGGKRRSFDAFSSNNSNVKSKRGDYRKTDKINRVVSSTFSSPLKKKEKTRSDYEIKTCFQRHNPPLREDVIGAFLEQKLKDLRSRENKELVNGDQPKRSSALILQELISVLNVERLICTDDRTFNDKNHKYERKHVGLCGTSCNGNHLSPGSVLEASFSSSSLEESSGHCFHPDSINCSYDQPERLKHEARLLNSETSFNIGKIGYKILTELVNRIHSILQSLDSFWTRSTESKLNHMTEVIFNAELILGNVTRHSEEEVVPQLLISCILDELDDIATDAMLRNFSQSEIKGFLFDCVIEYLESNCFQHYYNVFRSSCARTKIPLCMKAEILVQEVKSEIKKWEFLAGMEPDQIIEWEMSHSLGKWTDFNIEAFEFGVDIGGDVLQILLDEIVEDLGNFKKVAV 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02459 896 MobiDBLite consensus disorder prediction 149 168 - -
Tsu06g02459 896 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 12 890 - -
Tsu06g02459 896 MobiDBLite consensus disorder prediction 192 222 - -
Tsu06g02459 896 MobiDBLite consensus disorder prediction 124 140 - -
Tsu06g02459 896 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 12 890 - -
Tsu06g02459 896 MobiDBLite consensus disorder prediction 124 144 - -
Tsu06g02459 896 Pfam DUF761-associated sequence motif 102 129 IPR032795 -
Tsu06g02459 896 MobiDBLite consensus disorder prediction 203 222 - -
Tsu06g02459 896 Pfam Domain of unknown function (DUF4378) 783 883 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02459 Tsu-Chr6 31542736 31546540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02459 9 888 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.786 1.23e-79 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02459 - - cam:101506047 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02459 06 31542736 31546540 Tsu06g02459 06 31542736 31546540 ECH