Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02421 ATGGAACTCGATTCATCTTCACTACATCTCAATCAGACCAAGGTTGATTCCAATGGAAACCAAGTGAGTCGTAACAATGCACGCGGAATTCGTGTTATTGGAAACAGAATCTATGATTCTGAAAATGGCAAAACTTGTCACCAGTGCCGGCAAAAAACAAGGGATTTTTCTGCAGGATGTAAGAATCCAAGAGATGGGAAGCCTTGTCTCATTAGGTTCTGCCACAAATGCCTTTTGAATAGATATGGGGAAAAGGCAGAAGAGGTAGATCTATTGAATTATTGGAATTGTCCAAAGTGCAAAGGCATTTGCAACTGCAGTAATTGCATGAAAAAGAGGGGTCAACAACCTACTGGTTTACTAGTTCATACTGCCAAGGCATCTGGTTATAACTCCGTATCAGAAATGCTTAGCAAGAAGGCTTCTAAAGATTTGGAATCAAGCAATGCTGCAGTTTTGCCTATTAAGGAAACTACTTCGGAAATGGAGCTTGTAGTGGATCTATCAGGGGAACCAGGGAAGGAAAACTCATTAGGtggaaaaaaaggtttaaaggtTGAAAACGAGAAAACCAAGAAAATGAAGCGGGAAAAGCTAAAGGAAATATCTAATTATATCAGTGTTGATGATGCTTGTCAAAACAAGAAATTGAAAAAGCCTAAACTTTTTAATGGTGCTTCAGACGGTGAAGTGAAAAGAAATGCAAAGGCTGAAAAGGAAACAAAAGTAGAGGAGAATCATGGCATGATTTGTGGTCAAATGGATAGTCCTGTTGTGATGGATGATGGTGAAAATGCTAGTGCCAAGTCTCAAACAAATGCTGTAATTTTGCATGCTCAAAAAATTAAGGAAGAGACTCCCTTGCCTCCTGGAACTgagatgacaaaaatattagaCATTGAGTTTGCACCAGAGGACGTTGGGAATGCATTGCAGTTTTTAGAATTCTGCAGAGTGTTTGGAAAGGCTCTTGATCTCAAGAAAGGAGAAGCTGGAGCTATTTTAAGAGCATTGATACGTAAGCAAATTTTGCGACGTGGACAAAATACTTTAGTGGTTGAGTTCCAAATCAAGCTATTGACATTGATAGTTTCTGAGTCAGAAACTGAGTCTTCATCCTTAACTGCTAGCAATGGAAAAGATTCATGGTTGAAAGTTTTGGAGGATTTAATTACTGAATCTGATCTTGGACTAAAAGAGTTTGCGTTGGATTGGCTTAATAAAGGCATTAGCGGATATAATGATTTGGACATATCTAAAAAACTTATCCTTCTGAATTTTATCTGTGATGAAGCTTTGGGCACAATGAAGCTAAGGAGTTATATTGATGACCAAAATGCAAAAATTGCTGAAGAAAAGAAAGCAGCAAAATCTAAGGTTGCTGAAGCTAAGGAAAAGGAAAGAAGTCTTAAGCAACAGCTGCAGGATGAGATGGCAAAAGCTGTTGTATCAAATGGGACTAGCCTCTCAATTTCAGAATATGATGCTCttgtttcaaaaattaaaagtgaagCAGCTAAAGCTCATAACGAGTTGCTTGAGGCAAAGGGCACAGTTCCTAAACGGAACCAATGTTGTGATGCAGTGAGAATTGAGCCCGAGTTCTTGGATAGCAGTGGTAAGATATTTTGGAAATTAAGAAGCTGTAATGATGAATATGCTTTCCTGTTACAAGATTTGAAAATCCATGACCAAGATGCTGTTGAAGTTGATGAAAAATGGTTTGTTTATGGAGCTGAGCAGAAGGATGAGGTTGATAAGTACATTTCCTCTAGGAGAGATTGGTTACCAAAGCTTACTTCAGTATAA 1809 0.3737 MELDSSSLHLNQTKVDSNGNQVSRNNARGIRVIGNRIYDSENGKTCHQCRQKTRDFSAGCKNPRDGKPCLIRFCHKCLLNRYGEKAEEVDLLNYWNCPKCKGICNCSNCMKKRGQQPTGLLVHTAKASGYNSVSEMLSKKASKDLESSNAAVLPIKETTSEMELVVDLSGEPGKENSLGGKKGLKVENEKTKKMKREKLKEISNYISVDDACQNKKLKKPKLFNGASDGEVKRNAKAEKETKVEENHGMICGQMDSPVVMDDGENASAKSQTNAVILHAQKIKEETPLPPGTEMTKILDIEFAPEDVGNALQFLEFCRVFGKALDLKKGEAGAILRALIRKQILRRGQNTLVVEFQIKLLTLIVSESETESSSLTASNGKDSWLKVLEDLITESDLGLKEFALDWLNKGISGYNDLDISKKLILLNFICDEALGTMKLRSYIDDQNAKIAEEKKAAKSKVAEAKEKERSLKQQLQDEMAKAVVSNGTSLSISEYDALVSKIKSEAAKAHNELLEAKGTVPKRNQCCDAVRIEPEFLDSSGKIFWKLRSCNDEYAFLLQDLKIHDQDAVEVDEKWFVYGAEQKDEVDKYISSRRDWLPKLTSV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02421 602 MobiDBLite consensus disorder prediction 1 24 - -
Tsu06g02421 602 PANTHER OS05G0300700 PROTEIN 16 592 IPR040221 GO:0006355
Tsu06g02421 602 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 38 137 IPR018866 -
Tsu06g02421 602 PANTHER OS05G0300700 PROTEIN 16 592 - -
Tsu06g02421 602 SMART testlast3 304 369 IPR018501 -
Tsu06g02421 602 ProSiteProfiles DDT domain profile. 304 369 IPR018501 -
Tsu06g02421 602 Coils Coil 446 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02421 Tsu-Chr6 30919832 30924802 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Tsu06g02421 zf-4CXXC_R1 7.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02421 - - mtr:MTR_6g017265 919.457