Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02409 ATGGTAATTGGGCTTGTTCTTATCAATGGCGAAGGGATGCTTGCGTACAAGACGGTACCTGGAACtaaaagcttaaaaaaaacaGTTCATCTCGGATTACAGTTTCTTGCTCTCTTTTTGAGCTTAGTTGGTCTTTGGGCTGCTTGGAAGTTTCACAATGACAAGGGCATTGACAACTTCTACAGCCTGCATTCTTGGTTAGGCCTTGCATGTCTTTTCCTATTCTCCATCCAGTTGGCTGCTGGATTTGCAACATTTTGGTATCCAGGAGGCTCAAGAAACAGTAGAGTTGCACTGATGCCATGGCATGTGTTCTTTGGTATCTATATCTATGCATTGGCTATAGCTACAACTACTACTGGTATTTTAGAAAAGGCTACATTCCTTCAAACCAACAATGTCATATCGCGATATTCCAATGAAGCAATTCTTGTCAATTGCTTAGGTGTTTTGATTGTTGCTTTAGGTGGCTTTGTTATTCTTGGTTTAGTTACGCCGACTTATAACAAAACTGATGTTATAAGAGGAAATGAATGA 537 0.3929 MVIGLVLINGEGMLAYKTVPGTKSLKKTVHLGLQFLALFLSLVGLWAAWKFHNDKGIDNFYSLHSWLGLACLFLFSIQLAAGFATFWYPGGSRNSRVALMPWHVFFGIYIYALAIATTTTGILEKATFLQTNNVISRYSNEAILVNCLGVLIVALGGFVILGLVTPTYNKTDVIRGNE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02409 178 Pfam Eukaryotic cytochrome b561 1 128 IPR006593 -
Tsu06g02409 178 PANTHER B561, PUTATIVE-RELATED 1 177 - -
Tsu06g02409 178 SMART 561_7 1 122 IPR006593 -
Tsu06g02409 178 CDD Cyt_b561_ACYB-1_like 1 130 - -
Tsu06g02409 178 Gene3D - 1 176 - -
Tsu06g02409 178 PANTHER CYTOCHROME B561-RELATED 1 177 IPR043205 GO:0016491
Tsu06g02409 178 ProSiteProfiles Cytochrome b561 domain profile. 1 164 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02409 Tsu-Chr6 30551963 30554048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02409 1 174 Chloroplast and Mitochondria Gene Families AT5G38630 73.563 1.40e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02409 K08360 - gmx:100787570 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02409 06 30551963 30554048 Tsu06g02409 06 30551963 30554048 ECH