Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02408 ATGGATCCTTCTCGTCGAGCACCACGCACAGTAATCGACCCCGTTCCTAAATTCCGTCAAGTCGGATTCTTCGCTCCACCCGACCGTTCACAATCGGGTCCAATCGCTGACACATCCGCTTCTCTTTCACCCGTTATGATTCCTCCGCCACGTCATCTTTCCGATAACCTAATTCTCCATGCTCGTCCGGCGAATTCTCCTCGCCGTGGGCCTGAGTCGATTACTGTTGGTGGAAGTAATTCTGATGCACCTGTTTCGCCGGCGCCGTCGTCTTCTTATTCCAGTAGGTTTGTTGTTGGTGGTGATAGAGGGTTTTTTGATGGGAAAGGGAAGGATAATGGAAAAGTTGTGGCTTCTTCTTTTCCGAGAGGTGGATTTGATTTGACTGCGTTGAAGGGGAATGttgctggtggtggtggtgctgtTGTTCCGGCGAGTCAGTTGACTACTGTTTCTGTTGTGAATGATTCTCTTGGGATTCCTGaaaaagaaaaaacaaacaaaggtGGAGGGTCAGCTGGGGAAATGAAAGACCAATCTAGTTCAAAACAGCAGAAACCAAAACCCACAAAAGCTGAAAGACGTGCACTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCAAAAGGCGAAGGAAATAAGGGGTCTGGAACTGCTACATCAGCGAATGCAAAACCAGCTAAAGCAGTAAAGCCTACACAGAAAGCTGATACTGCATCAGTTGCAGCCACCGAGAAGAAGGGGGGTGATTTTCCACCTGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCCTGCAGTATGATGACAAGAGCCGGGTTGAGAAAGCTAAACGTCGTTCTGTGGTGAAACAAACTGAGTCTAGGAACCGAGTTGAGTTGTTCAGGCATTTACCACAATATGAGCATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCGATCTTCATCCTGTGCATCCTGCTGTTTATAAGGTGGGTTTGCAGTACATATCTGGAGATATATCTGGTGGCAGTGATCGTTGTATTGCAATGCTTCAAGCATTTCAGGAGGCAATCAAAGACTACAAAGTTCCACCTGAGAAGAGTCTCGGGAGAGACTTGACAGCAAAGATTGGTAGTTATGTATCATTTCTTAATGAGTGTCGACCTCTTTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAGAGTCAGATAGCCAAGCTACCTTTAACCTTGTCTGAGTCAGAAGCAAAAACTTCTCTCCACTCAGATATTGGACGTTTTATAAGTGAGAAGATCATACTTGCCAACAAGGTGATAGTCAAGCACGCCGTCACCAAAATAAGAGATGGGGATGTCCTTCTAACTTACGGCTCATCATTGGCAGTTGAAATGGTTTTTTTACATGCACATGAATTAGGAAAACAGTTTCGTGTTGTGATAGTTGATTCTCGTCCAAAGCTTAGAGGCCAACAGTTGCTCCGCAGGCTTGTGGAGAAAGGTCTTAACTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTAGTCGAGTTTTTATTGGTGCTGAATCAATACTGTCTAACGGGACGGTATATTCAAGAGTGGGAACTGCAAGTGTTGCAATGGTTGCTCATGCATCCCGTGTACCAGTCATAGTATGTTGCGAGGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCAATTTGCTCGAATGAGCTTGGTATGTATATTTAA 1737 0.4381 MDPSRRAPRTVIDPVPKFRQVGFFAPPDRSQSGPIADTSASLSPVMIPPPRHLSDNLILHARPANSPRRGPESITVGGSNSDAPVSPAPSSSYSSRFVVGGDRGFFDGKGKDNGKVVASSFPRGGFDLTALKGNVAGGGGAVVPASQLTTVSVVNDSLGIPEKEKTNKGGGSAGEMKDQSSSKQQKPKPTKAERRALQEAQRAAKAAAKGEGNKGSGTATSANAKPAKAVKPTQKADTASVAATEKKGGDFPPEKDRKKDAPQPRLQYDDKSRVEKAKRRSVVKQTESRNRVELFRHLPQYEHGSQLPDLEAKFFDLHPVHPAVYKVGLQYISGDISGGSDRCIAMLQAFQEAIKDYKVPPEKSLGRDLTAKIGSYVSFLNECRPLSISMGNAIRFLKSQIAKLPLTLSESEAKTSLHSDIGRFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSLAVEMVFLHAHELGKQFRVVIVDSRPKLRGQQLLRRLVEKGLNCTYTHINAVSYIMHEVSRVFIGAESILSNGTVYSRVGTASVAMVAHASRVPVIVCCEAYKFHERVQLDSICSNELGMYI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02408 578 MobiDBLite consensus disorder prediction 22 96 - -
Tsu06g02408 578 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 575 - -
Tsu06g02408 578 MobiDBLite consensus disorder prediction 153 285 - -
Tsu06g02408 578 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 575 - -
Tsu06g02408 578 Gene3D - 431 576 IPR042529 -
Tsu06g02408 578 MobiDBLite consensus disorder prediction 248 285 - -
Tsu06g02408 578 MobiDBLite consensus disorder prediction 72 96 - -
Tsu06g02408 578 SUPERFAMILY NagB/RpiA/CoA transferase-like 319 574 IPR037171 -
Tsu06g02408 578 MobiDBLite consensus disorder prediction 181 200 - -
Tsu06g02408 578 Pfam Initiation factor 2 subunit family 336 574 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02408 Tsu-Chr6 30544063 30550756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02408 4 575 Eukaryotic Initiation Factors Gene Family AT5G38640 61.424 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02408 K03680 - gmx:100775998 830.476