Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02405 ATGCTTGCCAAGGGTTATCATCTTGGTGGGAATACTTGGAGAGATATTCCAAGAAATACTTCACCAGCTGTCTCAAACATTCTACGAAAGAGAGGTTTTGATGAATTAAGCAATCAATATGTAATAAATGACACAGACTGGCGATATCATCCTGAAATGGCATTTGTCCgtgatttgataaaaaagaaaatttttgaAATCACCAGTCCTGTATTTCAGAATGAGCAACTTGCTCCTATGCTGGAATTATTGCTATTTACCACCGCTGCTTCAAAGGAGGAATATATGAACCTGGAGACGTTGAATCAGCATCTGCAACCTCTAATGAATGCTTCTATGAATTATCCCATGCCAGAAGGGGGACTATCTGACCGTTCTTTTGTTCATGACCTTCCTTGTTTTCCTGATGACGGTTCATCAATCCCCCAACTCGCTGATATGGATGTGCTTTGTAACTTACCTGTTTCTGGTGGTGGAAGCAATCTGGATTCTAACACCAGATCAATAAGCAACTATTTTCCTCAGCATCACGCAAATAATATGGAGATGGATCTGAGAAAATACAGCGATTGTTTGGGGACTATTCAGAATAATGATTCTATGAGTTTTCCTACTACAATGGGGATACCCTCTGaagatttaaattttaagttccCTCAACCTGCTTCGGTGAATATTTCGGAATTTTCTAATCAGTTTCCTGGCTTGGGGTCTTTCGTTGATTTGGAAGATACAATGCAATATCAATCACAGAAGTTGCATTTTCAGAAGAATTCCACTGTAAGACATCATGTTAATGATGTCCCTTCTGGCAAAACTGAACCCATACCAAGACCTGCCAAAAGACATAGAATGATGGATTCAGGTTTTGGTGTATCTTCACTTAACTATCCAAGTTTTGATCAATGGAATTGCGAGTTGGTTCAACCTCATTCTTCTCAAACACTTCTGGACGTGCAGCAACATTCAGAATTTCCCCTCTCTTCTATCCATTATGAGGGCAATGGGGAACAATTTACAAATCCTATGTTTCATTCTATGGGAATTGGAGGGATAAACAACAATGTGATGGTTGGTACATTTGGACAGATCTTGGAGAAGCCAGGCCTTGAAAGCCATGATGTGATGGATAGCAACAGCTTAAAGGAAATTGTCGGTAGCTTGAAATCCAGGATGCATAATCTTGACATGGATTCTATTCCTACTGATGGAGAGGATATACAAGGCAGAACTGAATTTGACCAAGGCATTAGATTAAATTCTAGTATGCATACTATCACTGAGAAAAGGAACTATGGAGAAGATATACAAGAAACAGCTGAATTCTGGACAAATGCCAAAAAGAAAGTCAATGAGCTAACAGATGATCAAGAGAATACAACAAAGTCCTCAATTACAACGGTTAGTGAGAAAAGGAACTATATGATTTATGATATTTCTGGACAGAATTGCGAGACTGGAGTGATTCCCTCGAAAGGCTTAGAGGCTGGTCAAATGTCAGATGAGCAAGACTCCATAATCTCTGGCATGATAGACAACAAAAACTCGGTGGAAATCGACTATATGCCTACTTCCAGGAGGGaacttattattattgatgatgaagagGACGTACAAGGCAGAACTGGATTCAACCAAGAGGGGATAAATGGTAACAAGGAATTCATTGAGTCAAAAGATGATCATGAGAAGCACACTGAGTCCTCAAATACCAAAGTTAATGAGATAAACAACAATGTGGCTGTTGATACACTTGGACAGACTTTTAAGACTGACACATTTCCCTCTAAAGGCTTAGAAGCTAGTCAGATATCAGAGGAGAAAGATATTGAAAGCCATGGTGTGATACACAGCTGCAAATCAATGGAAATTGACAATGGATCGAATTCCATAATTGGATTCAACCAGGAGGGGACTGATGCTAAAAAGAAAGTCAGTGAGCCAAAAGCTGATCAAGAGAAGCAAACAAAATCCTCAAATACAATAGTTAATGCTGTTTCCTTGATTGATTTGTTCACACCAGATCAAATAAAAGAACATATTAGTAGTCTGACAAAGAAACTTTTTAAGGTTGGAACTGAGGAGGAAAGAGGAATTGATACAAACACATGCCAATTATGTGAAAAGCAAAAGCTTTACTTTGCACCTGTACCGATTGTTTGTTTACGTTGTGGCAAGAACAtcagaaaaagtaaaacatacTTCtgtagaaaagaagaagaatttgaCGCACAGCGTTGCATTTGCTCTGGGTGTTATAGAACTTCTAAAGGTGGGCATATCACATTCAACGGGATATCTATTTCTAAGGCACATcttgaaaaaaagaataatgacGAATTAATTGAAGAAGCGtgggttgaATGCAATAAATGCAAAAGATGGCAGCATCAAGTATGTGCactctacaacaacaaaagagaTTTGGACCGCAATGCTGAGTATATATGTCCTTTCTGCCActtaaaagaaattgaaaatgaaatacaTGTTCCCTTACCAAAGAGTGCTATTTTTGGTGCTAAGGACTTGCCTAAAACCATGCTTAGTGACCACTTAGAGAAAAGACTTTTTGAGCGTCTCATGCAAGAGAGAGCAGACTGGAATAACGATAAAGGGAAGGAGAATCCTGACAAGGTTTTAGCAGAAGAAAGTCTTTCTATTAGAGAAGTGTTATCTGTCGAGAAACAATTGAAAGTGAAGAAGCAGTTTCTGGACATCATTCCAGAGGAGAATTACCCTGCTGAATTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGCAAATTGAAGGAGTAGATGTCTGCATTTTTGCAATGTATGTCCAGGAGTTTGGCTCTGAATGTGCCAATCCGAATCAGCGATGCGTATACATTTCATATCTTGATTCTGTCAAGTATTTTAGGCCTGAAAGAAATGCTGCGGGTGGAGGAGCACTTCGCACCTTCGTATACCATGAGATATtgATTGGATACCTTGATTTTTGTAAGAAGCGGGGTTTCTCAACTTGTTACATATGGGCCTGTGCTCCTTCAAAAAAAGAGGATGATTATATACTATATTGCCATCCCGGAGAGCAAAAGACTCCGCAGAATGATAAGCTACGCCGCTGGTATCTTTCAATGCTAAAAAGGGCCACTgaagaaaatattgttgttGGTTTAACCAACCTATATGATCATTTCTTTCTTCCTACTGAAAAATGTGATTCCAAGTTGTCAGCTTCTCGTTTGCCATACTTTGATGGAGACTACTGGTGTGGTTATGCTATGGGAGCAGCTACGGAGATTGAAAAAGTGAGTGGAGGAGACTATGAAAAGATGTTGAAGAAACAAGTGCCTAATAGAGCTTTAAAGACCATGGGACATGACAATCCTTCCAAAGACACTGCCAAAGACATTCTGGTGATGCAAAGATTGGGCCAACATATAATTGGTACCAGGGGAAATTTCTTAATAGCTCACTTGCAATATTCATGCATGCACTGCCGTGAAGCGATAATCTCTGGGAAGCGATGGTTTTGCACCAAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATAGTTCTGATGTACACACTTCAAAGAATGGCGAGGTGCATACACTTTGTCAGGTCGTTGTCGATGATATCCCCTCCAACACTAAACATAACGATGATATCATCCTTGAGAGTGGATTATTTGAAAATAGGAACAACTTTTTGAGTTTCTGCCAGAAGTATCTGTTTCAGTTTGACACACTCCGTCGTGCAAAGTATTCCTCAATGATGATCCTCTACCATCTAAACAATCCTACTCTGATGACTTTTGGAACATGTAGCATTTGTTGCGCATACAATATATTCCAAGAGTGCTGGAAATGTGAGATTTGTCCAGAGTGCACCATTTGCTCTGCTTGCTTTAAGGATAGAGGTGCTGACTGCCATGAACACAAGTTGACTCATAGTGAACAAAAGTTGACTCAAAATGAAGACAAGTTGACTCAAAATGAACACACGTTGACTCAAAATGAAGACAAGTTGACTCAAAATTATTCAGCACCACTATGTCAATCTGGAAACCAGGAGTTAAATGAGAAAATGATGGTGAAACTGCTGGATGTTTTGAAGCATGCATCTCAATGTTGTGCAACGAACGCTGAACCATGCTCTTATCCAAATTGTTTTCAAATCAAGAAGCTGTTCTCTCATGCCAGTAGATGCGAAATTCGAGTAAATCAAGGCTGTCAGCTTTGTAAAAAGACATGGTTTATGCTAACTGCTCACTCCAGGAATTGTGAAGACTCAGAATGTAGAATACCACGTTGCAGGGATCTGAAGAAGCATGAAGAAATGAGAGCAATGCATTCCACATCTTAG 4359 0.3799 MLAKGYHLGGNTWRDIPRNTSPAVSNILRKRGFDELSNQYVINDTDWRYHPEMAFVRDLIKKKIFEITSPVFQNEQLAPMLELLLFTTAASKEEYMNLETLNQHLQPLMNASMNYPMPEGGLSDRSFVHDLPCFPDDGSSIPQLADMDVLCNLPVSGGGSNLDSNTRSISNYFPQHHANNMEMDLRKYSDCLGTIQNNDSMSFPTTMGIPSEDLNFKFPQPASVNISEFSNQFPGLGSFVDLEDTMQYQSQKLHFQKNSTVRHHVNDVPSGKTEPIPRPAKRHRMMDSGFGVSSLNYPSFDQWNCELVQPHSSQTLLDVQQHSEFPLSSIHYEGNGEQFTNPMFHSMGIGGINNNVMVGTFGQILEKPGLESHDVMDSNSLKEIVGSLKSRMHNLDMDSIPTDGEDIQGRTEFDQGIRLNSSMHTITEKRNYGEDIQETAEFWTNAKKKVNELTDDQENTTKSSITTVSEKRNYMIYDISGQNCETGVIPSKGLEAGQMSDEQDSIISGMIDNKNSVEIDYMPTSRRELIIIDDEEDVQGRTGFNQEGINGNKEFIESKDDHEKHTESSNTKVNEINNNVAVDTLGQTFKTDTFPSKGLEASQISEEKDIESHGVIHSCKSMEIDNGSNSIIGFNQEGTDAKKKVSEPKADQEKQTKSSNTIVNAVSLIDLFTPDQIKEHISSLTKKLFKVGTEEERGIDTNTCQLCEKQKLYFAPVPIVCLRCGKNIRKSKTYFCRKEEEFDAQRCICSGCYRTSKGGHITFNGISISKAHLEKKNNDELIEEAWVECNKCKRWQHQVCALYNNKRDLDRNAEYICPFCHLKEIENEIHVPLPKSAIFGAKDLPKTMLSDHLEKRLFERLMQERADWNNDKGKENPDKVLAEESLSIREVLSVEKQLKVKKQFLDIIPEENYPAEFSYRSRVILLFQQIEGVDVCIFAMYVQEFGSECANPNQRCVYISYLDSVKYFRPERNAAGGGALRTFVYHEILIGYLDFCKKRGFSTCYIWACAPSKKEDDYILYCHPGEQKTPQNDKLRRWYLSMLKRATEENIVVGLTNLYDHFFLPTEKCDSKLSASRLPYFDGDYWCGYAMGAATEIEKVSGGDYEKMLKKQVPNRALKTMGHDNPSKDTAKDILVMQRLGQHIIGTRGNFLIAHLQYSCMHCREAIISGKRWFCTKCKKFQECERCHSSDVHTSKNGEVHTLCQVVVDDIPSNTKHNDDIILESGLFENRNNFLSFCQKYLFQFDTLRRAKYSSMMILYHLNNPTLMTFGTCSICCAYNIFQECWKCEICPECTICSACFKDRGADCHEHKLTHSEQKLTQNEDKLTQNEHTLTQNEDKLTQNYSAPLCQSGNQELNEKMMVKLLDVLKHASQCCATNAEPCSYPNCFQIKKLFSHASRCEIRVNQGCQLCKKTWFMLTAHSRNCEDSECRIPRCRDLKKHEEMRAMHSTS 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02405 1452 ProSiteProfiles Zinc finger TAZ-type profile. 1355 1439 IPR000197 -
Tsu06g02405 1452 MobiDBLite consensus disorder prediction 640 654 - -
Tsu06g02405 1452 PANTHER HISTONE ACETYLTRANSFERASE HAC2 542 1441 - -
Tsu06g02405 1452 SMART PHD_3 746 821 IPR001965 -
Tsu06g02405 1452 ProSiteProfiles Zinc finger PHD-type profile. 746 823 IPR019787 -
Tsu06g02405 1452 SUPERFAMILY RING/U-box 1135 1195 - -
Tsu06g02405 1452 Pfam TAZ zinc finger 1364 1436 IPR000197 -
Tsu06g02405 1452 ProSiteProfiles Zinc finger ZZ-type profile. 1155 1211 IPR000433 GO:0008270
Tsu06g02405 1452 SMART TAZ_2 1356 1437 IPR000197 -
Tsu06g02405 1452 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 838 1267 IPR031162 GO:0004402
Tsu06g02405 1452 SMART zz_5 1154 1199 IPR000433 GO:0008270
Tsu06g02405 1452 MobiDBLite consensus disorder prediction 637 658 - -
Tsu06g02405 1452 CDD PHD_HAC_like 748 820 - -
Tsu06g02405 1452 SUPERFAMILY RING/U-box 1250 1325 - -
Tsu06g02405 1452 Gene3D TAZ domain 1352 1452 IPR035898 -
Tsu06g02405 1452 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 779 824 IPR013083 -
Tsu06g02405 1452 PANTHER CBP/P300-RELATED 542 1441 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu06g02405 1452 SUPERFAMILY FYVE/PHD zinc finger 785 826 IPR011011 -
Tsu06g02405 1452 ProSitePatterns Zinc finger PHD-type signature. 747 820 IPR019786 -
Tsu06g02405 1452 Pfam Histone acetylation protein 881 1112 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu06g02405 1452 Gene3D - 1153 1202 IPR043145 -
Tsu06g02405 1452 SUPERFAMILY TAZ domain 1361 1440 IPR035898 -
Tsu06g02405 1452 SMART KAT11_2 872 1167 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02405 Tsu-Chr6 30460291 30468236 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tsu06g02405 HAT_KAT11 2.6e-29 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02405 K04498 - aprc:113866525 1147.5