Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02383 ATGGAAGTTGTTGATGAGAATAGAGAACTTAATATTGAAGGAAACAGAGAGTATGTTGTTGATTCACATGTTAACAATGATTCACATGTTAGTGATTCAAATGCTGATGGAAATCAAGAACCATACATTGGAATGGAATTTGCCTCACAAGAAAATGCTCATTCATTCTATGTTCACTATGCAAAATGTGTTGGGTTTGGGATTTCAATTAAAACAAGTCGTCGTTCAAGGGTTTCTAGAGAATTTATTGATGTAAAATATGTTTGCACAAGGTATGGAAAAAAGCGAGAATCCTCTGCAATTAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTTACTTGCATATAAAAAGAAAGTCTGATGGGAAATGGATTGTTCACGACTTCATTAAAGAGCACAATCATGAGCTTTTTCCAGCACATGCACATTATTTTCCTTGCCATAGACAAATTAATAAAGCTCAAAAGAGCTATATTGAAAATTTGCAACATGTCGGAGTGAGAACAACCACAATTTATGCAACAATGGCCAAACAACATGGAGGGTATGAAAATATTGCTTCCTTGGAGAAGGACATTAGAAATCATTTAGATAAAACTCATCGTCTATCTTTAGAATCAGGAGATGCAAATGCAATGTTGGACTGTTTTGTGGCTATGCAAGAagaaaatccaagatttttttatgcaattgaTTTGGATGAAGATATTCGTGTGAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGAGGATTATCAAGAGTTTGGAGATGTGATTTCATTTGATACAACATATATCACAAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGCGTGAACAATCACTTTCAGTCACGATTACTTGGTTGTGCATTACTAGCAGATGAAACATCAAATACTTTCATATGGTTGATGAAAACATGGCTTAGAGCAATGGGTGGAAATCCTCCAAATGCAATAATAACTGATCAAGACAAAGCGATGAAAGTGGCTATAAGAGAAGTATTTCCAAATACGCGGCATCAGTTTTGTCTATGGCATATACTTAAGAAGGTGCCTGAGAAGCTTAGTCATGTGTTACGAAAAAACGAAGACTTCAAGACAAATCTCAACTCATGTATTTATAGGTCTTGGTCAAAGAAGCAATTTGAAGATAAGTGGCAAGAAATGGTAGAAAAGTTTCAACTATTGGAGAATGAATGGATTCAGTCTTTGTATGAAGAACGTCAACATTGGGTTCCTGTTTACATGAAGGATACATTTTTTGGTGGCATATCTACAACTCAGAGATCAGAGAGCATCAAttcattttttgacaaatatGAGGCAAAAATGCAAGCTGATTTTAATACATGGCACAAGCAACCTATACTTAAGGCTCCATCACCTTTTGAGAAACAAATGTCTTTGATCTACACAAATGAAGTcttcaagaaatttcaaatcGAAGTTTTGGGATTATCTGGATGTCGTCTTTTGAAAGAGAACAAGGATAGTCAAATTACTACTTTTGAAATCTTAGACTTTCAAAACAATGAAGAGTTTGTTGTAGAGTGGGATGcatcaaaaaatgaaatttcttgCTTATGTCgcttatttgagtttaatggatatctCTGTAGACATTCATTGATGGCACTTCTAACTGTTTGTGTGTTTGCTATCCCACCACAATATATATTGAGAAGATGGAGCAAGGATGTAAGAAGCAAGcatcataaaagaaaaatagatgAAGATGTTTTCTCTAGTAAGGAGAGGTTTGATCGTTTATATGAAAAGACTATTGAATTTATTGAGGAAGGATCGTTAAGTTATGAGAGTTACAATTTTGCATGTCATACACTTGACGAAGCTTTGAAACAATGTGCAACTATTAATCAATCTTTGAAAATTGATAAGGAAAATGTTGGTAAGAACAATTTATGTGATATGCCACTGCTTGATCCTCGCCCATCAAAAACAAAAGGGGCTCCACCACGAAGAATAAAAAGTGGGATCGAAAAAGGGAACAAGAGACATAAAAAGGAGAAGTGA 2046 0.3324 MEVVDENRELNIEGNREYVVDSHVNNDSHVSDSNADGNQEPYIGMEFASQENAHSFYVHYAKCVGFGISIKTSRRSRVSREFIDVKYVCTRYGKKRESSAINPRPCLKVECEAYLHIKRKSDGKWIVHDFIKEHNHELFPAHAHYFPCHRQINKAQKSYIENLQHVGVRTTTIYATMAKQHGGYENIASLEKDIRNHLDKTHRLSLESGDANAMLDCFVAMQEENPRFFYAIDLDEDIRVKNVFWVDAKGREDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLADETSNTFIWLMKTWLRAMGGNPPNAIITDQDKAMKVAIREVFPNTRHQFCLWHILKKVPEKLSHVLRKNEDFKTNLNSCIYRSWSKKQFEDKWQEMVEKFQLLENEWIQSLYEERQHWVPVYMKDTFFGGISTTQRSESINSFFDKYEAKMQADFNTWHKQPILKAPSPFEKQMSLIYTNEVFKKFQIEVLGLSGCRLLKENKDSQITTFEILDFQNNEEFVVEWDASKNEISCLCRLFEFNGYLCRHSLMALLTVCVFAIPPQYILRRWSKDVRSKHHKRKIDEDVFSSKERFDRLYEKTIEFIEEGSLSYESYNFACHTLDEALKQCATINQSLKIDKENVGKNNLCDMPLLDPRPSKTKGAPPRRIKSGIEKGNKRHKKEK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02383 681 Pfam FAR1 DNA-binding domain 55 140 IPR004330 -
Tsu06g02383 681 Coils Coil 383 403 - -
Tsu06g02383 681 Pfam MULE transposase domain 260 354 IPR018289 -
Tsu06g02383 681 ProSiteProfiles Zinc finger SWIM-type profile. 518 554 IPR007527 GO:0008270
Tsu06g02383 681 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 639 IPR031052 GO:0006355
Tsu06g02383 681 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 26 639 - -
Tsu06g02383 681 MobiDBLite consensus disorder prediction 664 681 - -
Tsu06g02383 681 Pfam SWIM zinc finger 520 553 IPR007527 GO:0008270
Tsu06g02383 681 MobiDBLite consensus disorder prediction 647 681 - -
Tsu06g02383 681 SMART 26again6 529 556 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02383 Tsu-Chr6 30187552 30189765 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g02383 MULE 2.8e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02383 - - dzi:111309578 849.736