Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02345 ATGACTTCTTCTAATAAATATGAGTCTGTTCCTTACAGTGTAGTCTCAAGCCTATTgaataatttgaattatttgattTCATCGTCTGATTTTGGAAAAACTTATGGTGTTGCGGATCAGTTACAAAATATACAGTCTAACATTCAAGACATGAATTCAAAGCTTCCTGAGGTTGAGAGAAAAAAGACCACAGATATTCTACAATGGTTAAGAAGATCCAAACCTTTACTTCTTGCTGCCGATGACTTATTCGATGACATTGCTACTGACAATATGCTGCTGCTACCCGATGGTCCGCTTAATTGTATGAGAAAGGTACGCAGATTCTTCTCTTCCTCAAATCTATTTGTTTATCGTTCTCGAATTGCTCGTGAATTGATAGAAACAGAGAAGAATGTTAATGATATAGTTGAAGGTATGCGTCAGTTGAAGTTAAGCCAAGGACATGAGAGTTCGTTGAGGGTAAGAACAacaacttcaaatatatttgatgtggGTATGATTGGCAGagatgaggacaaaagggtgaTTATAGAACAGTTGATGCAACATggtggagaagaagaaaatctTGCTTTAATTGCTATTGTTGGTTTTGCTGGTATAGGCAAGACAACTCTTGCTCGAATGGTGTACGATGATGATAAAGTTAAAGGGTTCTTTCAAAAGCAAATGTGGGTCCATGTTTCTAAGGATTTTGAAGTCGAAACTATTGTTAGGAGTATTTTACAAGAATTAATACCTACTATATACAAACGAGAATCACTCGACCAAAACGTAGGCTTGCTTCGTCAAATCTTAAACAGTACAAGGTATTTGTTAGTGTTGGATGATGTGTGGAACACAAGTCATGCAAAATGGGCTCATTTGGCTAGTTACTTGATGTGTGGCGCTGAAGGGAGTAAGATTCTATTGACAACTCGCTCTGAAATGGTGGCCCATGTAATGGATGTGAAAACTTTGCATAAATTGAGTGGTTTAAGTGATGAAGATTCTTTGAGTTTGTTCAAGATGATGtttaaaaatgatgaatatatAAAGAGCCACGCCCTAGAATCTGTTGCtagcaaaataataaaaaagtgtaTGAGACATCCATTAACAATAAGATTTATGGCAGGCGTGTTACGTTATAAATCTAAAAGTGAATGGATTAGTGTTTTAGAACATGATCAATGGGAAACGGGATCTGTTTttatctttgatattctaagaAACAGCATTGACCTTCTTCCGGATCAATTAAAAGAATGTTTAAGTTATTGTTGTTTGTATCCAGAGGGTTGGGAAATTGAAAAGAACGAGTTGATTCAATCATGGATGGCACAAGGTTACCTTCAATGTGTAAATGATGATCAGCAACAAATGGAAGATCTTGGCAATGAATTTGTTAACACTCTTCTAATGATGTCATTTTTTGTGAGTGAAAAGCAGGATAAATATTGTAATCTTGTTAGTTTTAAAATGTCTCAATTGATTCATCACATTGTAGTTGACATTGATATTTACTTTGACCAACCAACGAGAGACATTAATGATGTGCACATGAGTCTGCCAATGAAATCTTACAATAACATTGGATTGTCAAATAGCATAGATTTAAGTAGGTTGCGAACATTTTTGTTACTACAGGAAAATAGGTGGGAGATTGCTCGGAACCCCAAAGAGTTGTCTgctatttttatatgcaaacGCTTACGATTGTTGAATCTATCCAAAACTTCTTTAGCGGTGTTACCCTATTCAATTGGAAAACTGAAACATTTAAGATATCTTAACTTATCTTGGTGTTTAAAACTAACAAGTCTTCCCAAATCCATAGGCAATCTAGTTAACTTACAAACATTGAAGTTAACTGGTTGTGAGAGGCTAAACTTTTCTACAGAAGTTATCACAAGGTTAACCAATTTGAGACATCTTGAGATTCACCGTTGTAAAGCTTTTGAGGACATGATGCCGGCTGGACTGGGGAAGTTGTCATCATTGCAATCCTCATTAAAGTTCCATGTGGTGGAtgataagaagaagaaagctGCCAAATTGAATGAATTGCAAAACTTAAATAACCTTAGAGGGAATTTAGAGATTAACGTGCTTTATCAAGTGAAAGACGCAATGATGGAATCACAACTTGTaaatatgaaagaaaagaaTCTCCTTGAGTCCTTGGATTTAAATTGGGAAAAGCAGGACAATATAGAGGCCGACAACTTTAAACTATTACAAAACCTTTGTCCACACCAAAATTTAAAAGGACTTCACGTGCGGTGGTATCCAGGCAATGAGTTTGCTGATTGGCTTTCTTCTACGAACCATCTTTCTCATATCTCTCTCTTTGGATTTAACAATTGCAAATCTCTCCCACCAATAGAGAACCTTCCAAACCTCAAGTCTCTTGAGATAGGTTCTATGAAAGTATTGGAATGCATATACTTTAAAGTGGAATCTTCCACTGCACCAGCATTCTTCGAGTCTTTGGAGAGGCTCAAGTTAAGTGGTTGTAAGAATTTCAAAGGATGGAAGATGATGGGAGGTGAGGTGAATCAAGATCATCCTTCGCTGCGTCAATTTCGTCGTCTCtctcaattaataatcaacaaatgCCCAAAGTTGATTGACTTGCCTACTTTTCCAAAAGTTGTGGAATTGCAATTGTATCAATCTATGGTGAAGCCATTGAAAAATACACTGGACATAGCATCCTCCTCATCTTCTGCCACTCCTCTTTCCATGATCAAGTCCCTAAAGATAGAAGGGAAGCTTCCAGATATTAGTATTCTACCGTCTCGGTGGAAACAAAACCTTACTTCCCTTAACCATCTTGAAATTGGAAATGTTGATGATTTAGGTATCTGGTTTGAGGACAACTTCACTGCTCTGCAGAAAGTTGTGATATATGGTTGTGATTTAAAAGCTTTGCCGATTGAAATGTGTTACTTGCCATCACTTGAGCATATAAAGATAATGGGATGCCATAATTTGGAGTCATTGCCAAAAGAAATGGATAACCTTACCAAGTTGGTGACACTAGAAATCTCGAATTGTCCCCTCTTAGTTGAACGATGCCAGAAGATAACAGGAGAAGATTGGCCCAAAATCCAAAACATCCAAAACATAATAGTGAGGCAGAATTTGAGGTAG 3141 0.3486 MTSSNKYESVPYSVVSSLLNNLNYLISSSDFGKTYGVADQLQNIQSNIQDMNSKLPEVERKKTTDILQWLRRSKPLLLAADDLFDDIATDNMLLLPDGPLNCMRKVRRFFSSSNLFVYRSRIARELIETEKNVNDIVEGMRQLKLSQGHESSLRVRTTTSNIFDVGMIGRDEDKRVIIEQLMQHGGEEENLALIAIVGFAGIGKTTLARMVYDDDKVKGFFQKQMWVHVSKDFEVETIVRSILQELIPTIYKRESLDQNVGLLRQILNSTRYLLVLDDVWNTSHAKWAHLASYLMCGAEGSKILLTTRSEMVAHVMDVKTLHKLSGLSDEDSLSLFKMMFKNDEYIKSHALESVASKIIKKCMRHPLTIRFMAGVLRYKSKSEWISVLEHDQWETGSVFIFDILRNSIDLLPDQLKECLSYCCLYPEGWEIEKNELIQSWMAQGYLQCVNDDQQQMEDLGNEFVNTLLMMSFFVSEKQDKYCNLVSFKMSQLIHHIVVDIDIYFDQPTRDINDVHMSLPMKSYNNIGLSNSIDLSRLRTFLLLQENRWEIARNPKELSAIFICKRLRLLNLSKTSLAVLPYSIGKLKHLRYLNLSWCLKLTSLPKSIGNLVNLQTLKLTGCERLNFSTEVITRLTNLRHLEIHRCKAFEDMMPAGLGKLSSLQSSLKFHVVDDKKKKAAKLNELQNLNNLRGNLEINVLYQVKDAMMESQLVNMKEKNLLESLDLNWEKQDNIEADNFKLLQNLCPHQNLKGLHVRWYPGNEFADWLSSTNHLSHISLFGFNNCKSLPPIENLPNLKSLEIGSMKVLECIYFKVESSTAPAFFESLERLKLSGCKNFKGWKMMGGEVNQDHPSLRQFRRLSQLIINKCPKLIDLPTFPKVVELQLYQSMVKPLKNTLDIASSSSSATPLSMIKSLKIEGKLPDISILPSRWKQNLTSLNHLEIGNVDDLGIWFEDNFTALQKVVIYGCDLKALPIEMCYLPSLEHIKIMGCHNLESLPKEMDNLTKLVTLEISNCPLLVERCQKITGEDWPKIQNIQNIIVRQNLR 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02345 1046 Coils Coil 41 61 - -
Tsu06g02345 1046 Gene3D Ribonuclease Inhibitor 678 886 IPR032675 -
Tsu06g02345 1046 Gene3D Ribonuclease Inhibitor 518 677 IPR032675 -
Tsu06g02345 1046 SUPERFAMILY L domain-like 524 1033 - -
Tsu06g02345 1046 Coils Coil 677 697 - -
Tsu06g02345 1046 PANTHER DISEASE RESISTANCE PROTEIN RP 62 948 IPR044974 GO:0006952
Tsu06g02345 1046 PANTHER OS05G0414200 PROTEIN 62 948 - -
Tsu06g02345 1046 Gene3D Ribonuclease Inhibitor 887 1044 IPR032675 -
Tsu06g02345 1046 Gene3D - 326 422 IPR042197 -
Tsu06g02345 1046 Pfam NB-ARC domain 172 389 IPR002182 GO:0043531
Tsu06g02345 1046 Gene3D - 156 321 IPR027417 -
Tsu06g02345 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 422 IPR027417 -
Tsu06g02345 1046 Coils Coil 1042 1046 - -
Tsu06g02345 1046 PRINTS Disease resistance protein signature 266 280 - -
Tsu06g02345 1046 PRINTS Disease resistance protein signature 362 376 - -
Tsu06g02345 1046 PRINTS Disease resistance protein signature 1002 1018 - -
Tsu06g02345 1046 PRINTS Disease resistance protein signature 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02345 Tsu-Chr6 29702203 29705343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02345 190 425 WRKY Transcription Factor Family AT5G45050 25.610 9.41e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02345 - - mtr:MTR_6g016430 982.245