Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02308 ATGACAGTTGGAACTCTTGCACCTAAGGCAGAGGATAAGAAACcaatgaagaagaaggaagttGCTGATGAGAATGTGCCTTTGTTACCTAAGACTCAAGAAACAGATGCTGAGTTCCATGAATTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAATTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCTGCCTGTGTCAAAAAGTTGGGAATGGTGCCTGGCCTTCTTGCCATAATCCTAACAGCATTATTGACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCGAGGGCAGGGAATATTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATACGGAAAAGCTGCGGTAGAGTTATGTATTGTAATCGGTAACATTGGTATtcttattgtttacatgatcaTTATTGGTGATGTGATTTCTGGAACAACTTCAAGCGGAATTCACTATCCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGtacatttgttattgttttcaCAACACTCGCTATATTTGCACCTTTGGTCAGCCTCAAGCGAATTGATTCATTGAGATTCACATCTGCATTGTCAATTGGATTAGCAGTTGTTTTCCTTGTCATTGCTGCGGGGATCTCAATTATCAAGATTATTAGTGGAGGCATTGGGATGCCTAGACTCTTCCCCATCATTACTGATGTAGCCTCAATTCTTGATCTATTCACTGTAGTTCCTGTGCTGATGACAGCCTACATATGTCACTACAATGTTCATAACATAGATAATGAACTGGAGGATTCCTCACAAATGCGTGGGGTTGTGCGCGCTTCCCTTACTCTATGCTCTTCAGTGTACCTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGCGAAGAAATTCTTGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTCAGTTCTGCACTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTGTTCTATGCAGTGAGGGTCAACATAGATGGTCTCATATTTTCCTCTTCAAGAAGGCCTTTGCTTGTTGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTTGGCACTATTTTCTTGGGAGCAAATTTCATACCTAACATTTGGGTAATTTTCCAGTTCGCTGGAGCAACAAGTTCTGTTTGTATAGCATTCATATTTCCAGCTGCAATCACTCTGAGGGATCGTTACAACATAGCAACTAAAACAGACAGGATCATGTCTCTCTTTATGATAGTCCTTGCAGTCTTGTCAAATGCTATAGCTATATACAGTGATGCCTATGCTTTGATCAACAAGAAAAAAACTTAA 1386 0.3983 MTVGTLAPKAEDKKPMKKKEVADENVPLLPKTQETDAEFHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNISSYGSLMGDAFGKYGKAAVELCIVIGNIGILIVYMIIIGDVISGTTSSGIHYPGILEGWFGVHWWTGRTFVIVFTTLAIFAPLVSLKRIDSLRFTSALSIGLAVVFLVIAAGISIIKIISGGIGMPRLFPIITDVASILDLFTVVPVLMTAYICHYNVHNIDNELEDSSQMRGVVRASLTLCSSVYLLTSFFGFLLFGEEILDDVLANFDTDLGIPFSSALNDAVRFSYAAHLVLVFPVVFYAVRVNIDGLIFSSSRRPLLVDNFRFASITIALVGTIFLGANFIPNIWVIFQFAGATSSVCIAFIFPAAITLRDRYNIATKTDRIMSLFMIVLAVLSNAIAIYSDAYALINKKKT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02308 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
Tsu06g02308 461 MobiDBLite consensus disorder prediction 1 22 - -
Tsu06g02308 461 PANTHER AMINO ACID TRANSPORTER 7 460 - -
Tsu06g02308 461 Pfam Transmembrane amino acid transporter protein 45 450 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02308 Tsu-Chr6 29292588 29297178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02308 3 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 61.707 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02308 K14207 - gmx:100791286 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02308 06 29292588 29297178 Tsu04g00327 04 2986052 2991008 PCT