Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02305 ATGACAATTGATACTATTGCACCTGAGAAGAGGAAATCAAGGAAGAACAAAGAACTTGTTGATGAGAATGCGCCTTTGGTACCGAAGTCTCAAGTGACAGATACTGAGTTACATGAATTTAATGGAGCTTCATTTTCTGGAGCTGTGTTCAATTTGTCAACGACAATTATTGGTGCTGGAATCATGGGCTTGCCTGCTTGTGTTAAGAAATTGGGCATGGTGCCTGGTCTTATTGCTATAGTGTTAACGGCCTTATTGACAGAGAAGTCAATTGAGTTCATGATCAGGTTTTCGAGGGCAGGAAATCTTACTTCCTATGGAAGTCTTATGGGGGATGCTTTTGGGAAATATGGAAAAGCACTTGTGGAGATATGTGTTGTAATCAATAACACTGGTATTCTGATCGTCTACATGATTATTATTGGGGATGTGGTATCTGGAACAACTTCAAGTGGAATTCACCATCCTGGTATCCTTGAAGGATGGTTTGGTGTTCATTGGTGGACTGGGCGTacatttgttcttatttttacaaCACTTGCTATTTTTGCACCTCTTGTCAGCTTTAAGAAAATTGATTCATTGAGATTCACGTCTGCATTATCAGTTGGATTAGCAGTTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTATTAAGATTATTAGCGGAGGCATTGGGATGCCCAGACTCTTCCCGGTCATTACTGACGCAGCTTCCGTTTTTGACCTATTCACTGTAGTTCCAGTGCTGGTGACTGCTTACATCTGTCACTACAATGTTCACAACATAGATAATGAACTGGAGGATTCCTCATGGATGCATGGCGTTGTGCGTACTTCCCTCACTTTATGCTCTTCAGTTTACATACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGACGATACTCTTGATGACGTTCTTGCCAATTTTGATACTAATCTTGGACTTCCTTTCGGTTCTGCGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTCGTGCTTGTATTTCCTGTAGTTTTCTATGCATTGAGGGTCAACATAGACGGTCTCATATTTTCCTCTTCAAGAAGGCCTTTGATTGTTGATAACTTCAGATTTGCATCGATTACTATTGCCCTTGTTGGCAGTATTTTCATCGGGGCAAATTCCATTCCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTTCTGTTTGTGTAGGATTCATATTTCCAGCTGCAATCACTCTGAGGGATCATTACAACATAGCAACTAAAACGGACAAGATTCTGTCTGTCCTTATGATAGTTCTTGCCGTCTTGTCAAATGCCGTGGCTATATACAGTGATGCCTATTCCTTGATCAACAAGAATAAAACTTAA 1380 0.4051 MTIDTIAPEKRKSRKNKELVDENAPLVPKSQVTDTELHEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIAIVLTALLTEKSIEFMIRFSRAGNLTSYGSLMGDAFGKYGKALVEICVVINNTGILIVYMIIIGDVVSGTTSSGIHHPGILEGWFGVHWWTGRTFVLIFTTLAIFAPLVSFKKIDSLRFTSALSVGLAVVFLIIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSWMHGVVRTSLTLCSSVYILTSFFGFLLFGDDTLDDVLANFDTNLGLPFGSALNDAVRFSYAAHLVLVFPVVFYALRVNIDGLIFSSSRRPLIVDNFRFASITIALVGSIFIGANSIPSIWDIFQFTGATASVCVGFIFPAAITLRDHYNIATKTDKILSVLMIVLAVLSNAVAIYSDAYSLINKNKT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02305 459 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 458 - -
Tsu06g02305 459 PANTHER AMINO ACID TRANSPORTER 7 458 - -
Tsu06g02305 459 Pfam Transmembrane amino acid transporter protein 43 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02305 Tsu-Chr6 29285412 29289522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02305 3 457 Amino Acid or Auxin Permease AAAP Family AT3G30390 64.396 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02305 K14207 - gmx:100791286 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02305 06 29285412 29289522 Tsu06g02305 06 29285412 29289522 ECH