Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02299 atgGTTCGTCAAACTGATTTAGTTATCATTGGTGTCTCTGTTGGTTTGGCCCTTGGAATTCTGATTTCTTGCCTCATATTTTTCGGCATAAGGTGGTGCAAGAAACGTTCTCATCTTACTCGATCTGCTAGTGAGCCTAGTTTAACAACTCTACCAATACGAACAAATGGAATTGAAGCAAGTACCGACTTTAGTGCATCCATCACTAGTTCCATAGGTACTTCAAGGTCAGATAATCAACAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAAAGATCGGTTTGCTTCAGCATCAGGCATTCTAAAGTATTCGTACAAAGAACTTCAGAAGGCCACACAAAATTTCACGACTACTTTGGGACAAGGATCATATGGCACGGTTTATAAAGCCACAATATCTACCGGAGAGGTGGTAGCTGTGAAGGTGCTAGCAAACAATTCCAAACAAGGGGAGAGAGAATTCCAAACAGAGGTTTCTCTGCTAGGAAGATTGCATCACCGGAATCTTGTGAATTTGCTTGGATATTGTGTAGATAAAGGACAACACATACTGGTTTATCAGTACATGAGCAATGGAAGTTTAGCAAATATTTTATATGGTGAAGAAAAGAAGTTAAGTTGGGATGACAGGCTGCAAATTGCTGTTGACATTTCACATGGAATCGAGTATCTTCATGAAGGAGCAGTTCCACCAGTCATACATCGTGATTTGAAGTCTCCCAACATATTGCTAGACGACTCTATGAGAGCTAAGGTTGCTGATTTTGGCCTCTCAAAGGAAGAGAGATTTGATGGGCGAAATTCCGGTCTTAAAGGTACATATGGTTACATGGACCCGGCGTACATTTCGACAAGCAAATTAACAACCAAGAGTGACATATACAGTTTTGGTATCATACTTTTTGAGCTCATCACTGCCATCCATCCACATCAAAATTTGATGGAATATATTAACCTTGCTGCAATGGAACATGATGGTATAGATGAGATACTTGACAAGCAACTTGTTGGAAAATGCAATGTTGTAGAAGTGAGACAGCTTGCTAAAATTGCACACAAATGCTTACACAAATCACCTAAGAAAAGACCTTCTATAGGTGAAGTTTCACAAAGTATATCAAGGATAAAGCAAAGACGATTGCGCCATGTGATGGAAGATAACTTGTCATTTGCAAATAGTAATAACTTTTCAAGAGCTGCGAGTCGATTTGAAGATAACTTGTCATTTGCAAATAGTAATAACTTTTCAAGAGCTGCTAGTCGATTAGAAGATCGACAAGTGGAATTGAGTAGGATAGTTACAATGACCATCAAAGAAAATGTATGA 1335 0.3873 MVRQTDLVIIGVSVGLALGILISCLIFFGIRWCKKRSHLTRSASEPSLTTLPIRTNGIEASTDFSASITSSIGTSRSDNQQKNSHFTWWNHQNKDRFASASGILKYSYKELQKATQNFTTTLGQGSYGTVYKATISTGEVVAVKVLANNSKQGEREFQTEVSLLGRLHHRNLVNLLGYCVDKGQHILVYQYMSNGSLANILYGEEKKLSWDDRLQIAVDISHGIEYLHEGAVPPVIHRDLKSPNILLDDSMRAKVADFGLSKEERFDGRNSGLKGTYGYMDPAYISTSKLTTKSDIYSFGIILFELITAIHPHQNLMEYINLAAMEHDGIDEILDKQLVGKCNVVEVRQLAKIAHKCLHKSPKKRPSIGEVSQSISRIKQRRLRHVMEDNLSFANSNNFSRAASRFEDNLSFANSNNFSRAASRLEDRQVELSRIVTMTIKENV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02299 444 Gene3D Transferase(Phosphotransferase) domain 1 192 400 - -
Tsu06g02299 444 ProSiteProfiles Protein kinase domain profile. 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02299 444 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Tsu06g02299 444 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
Tsu06g02299 444 SUPERFAMILY Protein kinase-like (PK-like) 87 373 IPR011009 -
Tsu06g02299 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Tsu06g02299 444 CDD STKc_IRAK 122 378 - -
Tsu06g02299 444 Gene3D Phosphorylase Kinase; domain 1 77 191 - -
Tsu06g02299 444 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02299 444 PANTHER OS01G0750732 PROTEIN 9 408 - -
Tsu06g02299 444 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Tsu06g02299 444 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02299 Tsu-Chr6 29174083 29180048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02299 71 380 Receptor kinase-like Gene Family AT1G79620 42.462 1.69e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Tsu06g02299 PK_Tyr_Ser-Thr 2.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02299 - - gmx:100819995 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02299 06 29174083 29180048 Tsu06g02299 06 29174083 29180048 ECH