Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02288 ATGGTTTTTTTCATGGCAATTGTTGGTGTATTCTTTGTACTCTGTTTTTGCTCTGCTCTCTTGAGATGGAATGAAGTAAGGTATAGAAAGAAAGGTTTACCACTTGGTACAATGGGGTGGCCACTATTTGGAGAGACAACTGAGTTTCTTAAACAAGGTCCTAATTTCATGAAAATCCAAAGAGCAAGGTTTGGAAGTTTTTTCAAATCACACATACTTGGTTGTCCTACAATAGTTTCAATGGATCCAGAACTTAATAGATACATTTTAATGAATGAATCAAAAGGTCTTGTTCCTGGTTACCCTCAATCTATGTTAGATATCTTAGGAAAATGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTTCTTTCAATCATTAGCCCCACCATGATTAGAGATcaaattttaccaaaaattgatgaatttatgaatgcTCAATTAAGCAATTGGGATGACAAAGTCATCAACATTCAAGAGAAAACCAAAGAGATGGTGTTCCTCTCTTCTCTAAAGCAGATTGCTAGTATAGAATCAAGTTCAAAAATAGCTGATTCATTCAAGACAGAGTTTTTTAAGCTAGTTTTAGGAACCATTTCTCTACCAATTAACCTTCTTGGCACAAATTACTACCGTGGATTTCAGGCAAGGAAGAATATAATCAACATTTTGAGTCAATTATTAAAGGAAAGAAGAGCATCCAATGAAACACACAAAGACATGCTTGGTAATTTGatggaaaaagatgaaaataagtaCAAATTAAGTGATGAAGAAATAATTGATCTAGTGATTACACTTATGTATTCTGGTTATGAAACTGTTTCAACCACATCAATGATGGCTGTTAAGTACCTTCATGATCATCCCAAAGCTCTTGAAGAACTTAGAAAAGAACATTTGGCCATAAGAGAGAGGAAAAAGCCAAATGAACCAATTGATTCCAATGATCTCAAATCAATGAAGTTTACTCGTGCGGTTATTTTTGAGACATCTAGATTGGCTACAATAGTTAATGGAGTTCTAAGGAAAACCACTCAAGATATGGAACTAAATGgCTATTTGATTCCTAAAGGTTGGAGAATATATGTGTATACAAGAGAGATAAATTATGACAATTTTTTGTATCCTGATCCATTAACATTCAATCCATGGAGATGGATGGACAAGAGTTTGGAATCACAAAATTACTTCTTGATATTTGGAGGTGGCACTAGACTTTGTCCAGGAAAAGAATTGGGAATCACTGAAATTTCAACTTTCTTACACTACCTTGTAACTAGATACAGTTGGCAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTCAAGCACCAAATGGATTGCACATGAGATTTTCATCTTACTAA 1395 0.3355 MVFFMAIVGVFFVLCFCSALLRWNEVRYRKKGLPLGTMGWPLFGETTEFLKQGPNFMKIQRARFGSFFKSHILGCPTIVSMDPELNRYILMNESKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTMIRDQILPKIDEFMNAQLSNWDDKVINIQEKTKEMVFLSSLKQIASIESSSKIADSFKTEFFKLVLGTISLPINLLGTNYYRGFQARKNIINILSQLLKERRASNETHKDMLGNLMEKDENKYKLSDEEIIDLVITLMYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRERKKPNEPIDSNDLKSMKFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDNFLYPDPLTFNPWRWMDKSLESQNYFLIFGGGTRLCPGKELGITEISTFLHYLVTRYSWQEVGGDKLMKFPRVQAPNGLHMRFSSY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02288 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Tsu06g02288 464 Gene3D Cytochrome P450 24 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 462 - -
Tsu06g02288 464 PANTHER CYTOCHROME P450 26 5 462 - -
Tsu06g02288 464 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g02288 464 SUPERFAMILY Cytochrome P450 27 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02288 Tsu-Chr6 28939257 28943861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02288 81 464 Cytochrome P450 AT5G38970 70.909 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02288 K09590 - gmx:100805958 830.861