Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02281 ATGAGGcttattttttcatttcttggTGTTCTTGTGCTATCTTCTTATGCAAtTGCTTATGATCCTTTGGATCCAAATGGAAACGTAACAATAAAATGGGATGTTATGTCTTGGACACCAGATGGTTATTTGGCGACAGTAACAATCAACAACTTCCAAATGTTTCGACATATAATGAATCCGGGATGGACCTTAGGATGGACTTGGGCGAAGAAAGAAGTTATATGGTCAATGGTAGGAGCACAAACAACAGAACAAGGTGATTGTTCTAAGTTCAAAGGAAACATACCTCATTGTTGCAAGAAAGTCCCTACAGTTGTAGACCTTCTCCCCGGCGTACCTTACAATCAACAATTCACAAACTGTTGTAAAGGTGGAGTTGTTTCAGCATGGGGACAAGATCCTACACAATCAATATCAGCTTTTCAAGTTAGTGTAGGACTAGCTGGAACCTCGAACAAAACAGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCAGGACCAGGATATACTTGTGGCCCTGCCAAGATCGTTCCTCCCACCAATTTTCTTACCCCTGATAGGCGCCGCAAGACTCAAGCTTTGATGACATGGAATGTTACGTGTACTTACTCGCAATTTCTAGCAAGAAAGAATCCAAGTTgttgtttatctttatcttCCTTCTACAATGAAACCATTACACCTTGTCCTCATTGTGCATGTGGCTGCCAAAACAAGAAGAATTGTGTGAAGAATGATGCTAAGATTCTGAGTATGGTAGGAGTTCATACTCCAAAGAAAGACAATGAACCATTGATGCAGTGTACTCATCATATGTGTCCAATTAGAGTACATTGGCATGTGAAGAATAACTATAAGGACTATTGGCGAGTTAAAATCGCGgtaacaaattttaattacaGGATGAATTACTCTCTATGGAGTCTTGCTATTCAACATCCAAATCTCAACAATGTTACTCAAGTTTTCAGTTTTAATTATAAGCCACTTGTTCCCTATGGATCCATAAATGACACAGGAATGTTCTATGGCATGAAATACTTCAATGATCTACTAATGGAAGCTGGAGCAAAGGGAAATATTCAATCAGAGGTATTGCTTCAGAAAAACCAAGATACCTTCACATTCAAGCAAGGATGGGCATTTCCTCACAAGGTTTACTTTAATGGTGATGAATGCATGCTTCCTCCACCCGATAGCTACCCTTTTCTCCCTAATTCTGCACCTGCAAGCCTACTTACCTTCAAGGCACTCATCTTTTCATTACTTTTACTGTTAGCACTTTTGTGA 1296 0.3835 MRLIFSFLGVLVLSSYAIAYDPLDPNGNVTIKWDVMSWTPDGYLATVTINNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKVPTVVDLLPGVPYNQQFTNCCKGGVVSAWGQDPTQSISAFQVSVGLAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPPTNFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCLSLSSFYNETITPCPHCACGCQNKKNCVKNDAKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKNNYKDYWRVKIAVTNFNYRMNYSLWSLAIQHPNLNNVTQVFSFNYKPLVPYGSINDTGMFYGMKYFNDLLMEAGAKGNIQSEVLLQKNQDTFTFKQGWAFPHKVYFNGDECMLPPPDSYPFLPNSAPASLLTFKALIFSLLLLLALL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02281 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Tsu06g02281 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Tsu06g02281 431 PANTHER COBRA-LIKE PROTEIN 6 429 - -
Tsu06g02281 431 PANTHER PROTEIN COBRA 6 429 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02281 Tsu-Chr6 28765936 28769070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02281 1 431 COBRA Gene Family AT3G29810 63.288 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02281 - - gmx:100798678 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02281 06 28765936 28769070 Tsu04g00288 04 2594956 2598923 PCT
Tsu04g00289 04 2599043 2602770 Tsu06g02281 06 28765936 28769070 PCT