Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02279 ATGGTACAACCAGAAGAACCATTCAAAGTTGTTGAAGTTTGCAATGTTGAACCATTTCATGGACCAACAAAACCTTCTCAATCAACACCAACATCACTTCCCCTCACTTTCTTTGATCTTTTATGTTTAAGATCACCACCAGTTGAATGTCTCTACTTCTATGAACTCACAAACTCAACCACTTTTTTCTATGAAACTATTCTTCCAAATCTCAAACACTCACTTTCACTCACACTTCAACACTTTCTCCCTCTTGCCGGAAACATAACTTGGCCTGTTGATTCATCCAAACCATTCATAAACTATGTTCGCGGCAATTCTGTTTCCTTCACTGTTGTTGAGTCCAAAGCAAGTTTCAAAGATATTTCTTCTCATCATTGTGAAGCTTCAAAAAGACATCACTTGATACCACTTTTGAAAACTTCTCATGAAAAAGCTTCTTTGATTTCAATTCAAGTCACTTTGTTTCCAAACAATGGTTTTTGCATTGGAATAACAACACACCATGCTGCTTTTGATGGAAAGTCTGCTTCACATTTTATGAAATCATGGTCCTATATTACATGTTCTAATTCTAACCTTGATTCATCTTTTTTATCTTTACCTGAAAATCTAGCACCTTTTTTTGATAGATCATTGATACAAGATCACAATAATGGAATTGGAATCAGTGAAGCATATGTTGTTGATTATATGAAACAAGGTGGACCATATAATAAAAGTGTCAAGGTTATAGATTTTTCTCGGTCATTGAAAAATGATGCAATTAAAAGCTTATTTGAATTAACAccttcaaatattcaaaagctTAAGCAACATGCAAAAAATGAGATGAAAATGAATGTTATAAATTTGTCAAGTTTTTCAGTTACATGTGCTTATGTGTTAGCATGTTTAGCAAAAGCAGAACAACCAAAGGATGAAAAAGTGATTTTCATACTTAATGTTGATTGTAGAACAAGATTGGACCCTCCAATTTCTTCTATGTATATTGGAAATTGTATTGCAGGACTAAAGGTTGTGTTTGAGACAAAGAAGTTAGTTAGAAAAAATGGATTTCTGAGAGCTTTAGAAGGGATAATTGAAGCTTTGAATAGTGTGAAAGATGGTGGAGTGTTAAATGGAGCTGAAAATTGGGTTTCTAATGGGATAAATGGAATTGAATATAAAATGTATTCTATTGCAGGATCACCAAGGCTTGAATTGTATAGcattgattttggatttggaaaGCCAAAAAAAGTTGATATAGCTTCAACTGATAAAACAGGAGCATTTTCTCATTTTTGA 1290 0.3217 MVQPEEPFKVVEVCNVEPFHGPTKPSQSTPTSLPLTFFDLLCLRSPPVECLYFYELTNSTTFFYETILPNLKHSLSLTLQHFLPLAGNITWPVDSSKPFINYVRGNSVSFTVVESKASFKDISSHHCEASKRHHLIPLLKTSHEKASLISIQVTLFPNNGFCIGITTHHAAFDGKSASHFMKSWSYITCSNSNLDSSFLSLPENLAPFFDRSLIQDHNNGIGISEAYVVDYMKQGGPYNKSVKVIDFSRSLKNDAIKSLFELTPSNIQKLKQHAKNEMKMNVINLSSFSVTCAYVLACLAKAEQPKDEKVIFILNVDCRTRLDPPISSMYIGNCIAGLKVVFETKKLVRKNGFLRALEGIIEALNSVKDGGVLNGAENWVSNGINGIEYKMYSIAGSPRLELYSIDFGFGKPKKVDIASTDKTGAFSHF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02279 429 Pfam Transferase family 24 424 - -
Tsu06g02279 429 Gene3D - 252 429 IPR023213 -
Tsu06g02279 429 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 5 427 - -
Tsu06g02279 429 Gene3D - 8 233 IPR023213 -
Tsu06g02279 429 PANTHER - 5 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02279 Tsu-Chr6 28749912 28751201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02279 24 412 Monolignol Biosynthesis Gene Families AT5G48930 28.148 4.41e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02279 - - cam:101513090 579.326