Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02277 ATGGCACAAGAATCATTTAAAGTTGTTGAAGTTTGCAACATTGAACCATTTCATGAACCAACAAAACCTTCTCAATCACCAACCTCACTTCCACTACCTTTCTTTGATCTTTTATGGCTAAGATTTCCACCAGTTGAACGTCTTTTCTTCTATGAATTCACAAATTCAACCAATTTTTTCTATGAAACTTTTCTTCCAAATCTCAAACATTCACTTTCACTCACACTTCAACACTTTCTCCCTTTCGCCGGAAACATAGTTTGGCCAATTGGTTCAGTGAGACCAATCATAAACTATGTTCCTGGCGATTTTGTTTCCTTCACTGTTGTCGAATCAAACTCAAGTTTCAAAGATCTTTCTTCTAAGCATTGTGATGCTTCAAAAAGACATCATTTGATACCCCTTTTGAATACTTCACATGAAAAAGCTTCTTTGGTTTCATTTCAAGTAACAATGTTTCCAAACAATGGTTTTTGCATTGGAATAACAACACATCATGCTGGTTTAGATGGAAAATCTTCAACAAATTTTATGAAATCATGGTCCTATATCACATCTTCTAATTCTAACCTTGGTTCATCTTTTTTATCTTTACCTGAAAATCTGACACCTTTTTTGGATAGATCAATGATAGAAGATCATTACAATGGAATTAGTGAAGCATATGGTAATGCTTTGATGAAACATGGTGGACCAAATAATAAAAGTCTCAAAGTTTGGGATTCTTTAGGACAAAAGGTTAAGCTTGAGCCAAAGAAATTAGTTGAAAAAGATGGATTTTTAAGTGCTTTAGAAGGGATGAATGAAGGTTTGAATAAGGTGAAAAATGGTGAAGTGTTGAATGGAGCTGAAAATTGGTTAGATAATATGTTTAATGCTAATGAGAGCATTAAAATATATTCTCTTGCAGGATCACCAAGGTTTGAAGTTTATAGtattgattttggatttggaaaGCCTAAAAAAGTTGATACTACTTCAACCGACAAAACAGGAGCATTTTCTCTTAGTGAAAATAGGAATAATGATGGTGGAGTTGAGATTGGTTTGGTTTTGAATAAGAAAGATATGGAAGCTTTTTCTACCCTTTTTGCTCAAGGACTTGAATTCATTTAA 1116 0.3289 MAQESFKVVEVCNIEPFHEPTKPSQSPTSLPLPFFDLLWLRFPPVERLFFYEFTNSTNFFYETFLPNLKHSLSLTLQHFLPFAGNIVWPIGSVRPIINYVPGDFVSFTVVESNSSFKDLSSKHCDASKRHHLIPLLNTSHEKASLVSFQVTMFPNNGFCIGITTHHAGLDGKSSTNFMKSWSYITSSNSNLGSSFLSLPENLTPFLDRSMIEDHYNGISEAYGNALMKHGGPNNKSLKVWDSLGQKVKLEPKKLVEKDGFLSALEGMNEGLNKVKNGEVLNGAENWLDNMFNANESIKIYSLAGSPRFEVYSIDFGFGKPKKVDTTSTDKTGAFSLSENRNNDGGVEIGLVLNKKDMEAFSTLFAQGLEFI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02277 371 PANTHER - 244 369 - -
Tsu06g02277 371 Gene3D - 2 228 IPR023213 -
Tsu06g02277 371 PANTHER - 3 239 - -
Tsu06g02277 371 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 244 369 - -
Tsu06g02277 371 Pfam Transferase family 259 362 - -
Tsu06g02277 371 Pfam Transferase family 20 204 - -
Tsu06g02277 371 Gene3D - 242 371 IPR023213 -
Tsu06g02277 371 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02277 Tsu-Chr6 28727460 28728839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02277 36 212 Monolignol Biosynthesis Gene Families AT5G48930 28.333 5.18e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02277 - - pvu:PHAVU_004G040100g 395.971