Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02276 ATGGCACAAGAATCATTCAAAGTTATTGAAGTTTGCAACATTGAACCATCAAAACCATCTCAATCACCAACCTCACTTCCATTAACTTTCTTTGATCTTCTATGGCTAAGATTTCCACCAGTTGAACGTCTCTTCTTCTATGAATTCACAAACTCAACCACTTTTTTCTATGAAACTATTCTTCCAAATCTCAAAAATTCACTTTCACTCACACTTCAACACTTTCTCCCTTTCGCCGGAAATATAGTTTGGCCTACTGGTTCATTGAAACCAGTAATAAACTATGTTCCTGGCGATTTTGTTTCCTTTACGGTTGTCGAATCAAACTCAAGTTTCAAAGATCTTTCTTCTAATCATTGTGATGCTTCAAAAAGACATCATTTGATACCCCTTTTGAATACTTCACATGAAAAAGCTTCTTTGGTTTCATTTCAAGTCACTTTGTTTCCAAATAATGGTTTTTGCATTGGAATAACAACTCATCATGCTGGTTTAGATGGAAAATCTTCAACAACTTTTATGAAATCATGGTCCTATATTACATCTTCCAATTTAAACCTAGATTCATCTTTTATACCTTTACCTGAAAATCTAACACCTTTTTTTGATAGATCATTGATAGAAGATAAATACAATGGAATTAGTGAAGCATATGGTAATGCTTTGATGAAACATGGTGGACCAAGTCTCAAAGTTTGGGATTCTTTTGGACAAAGCATTGAGGTTGATCCAAAGAAATTTGTTGGAAAAGATGGATTTTTAAGTGCTTTAGAAGGGATGAATGAAGGTTTGAATAAGGTGAAAAATGATGGAGTGTTGAATGAAGCTGAAAATTGGTTAGATCATATGTTTAGTTCTAATAAtcaaagtattaaaatatattctaTTGCCGGATCACCAAGGTTTGGAGTTTATGGtattgattttggatttggaaaGCCTAAAAAGGTTGATATGACTTCAACCGACAAAACAGGAGCATTTTCTCTTAGTGAAAATAGGAATAATGATGGTGGAGTTGAGATTGGTTTGGCTTTGAGTAAGCAAGAGATGGAAGCTTTTTCTACCCTTTTTGATCAAGGACTTGAATCCCTTTaa 1098 0.3297 MAQESFKVIEVCNIEPSKPSQSPTSLPLTFFDLLWLRFPPVERLFFYEFTNSTTFFYETILPNLKNSLSLTLQHFLPFAGNIVWPTGSLKPVINYVPGDFVSFTVVESNSSFKDLSSNHCDASKRHHLIPLLNTSHEKASLVSFQVTLFPNNGFCIGITTHHAGLDGKSSTTFMKSWSYITSSNLNLDSSFIPLPENLTPFFDRSLIEDKYNGISEAYGNALMKHGGPSLKVWDSFGQSIEVDPKKFVGKDGFLSALEGMNEGLNKVKNDGVLNEAENWLDHMFSSNNQSIKIYSIAGSPRFGVYGIDFGFGKPKKVDMTSTDKTGAFSLSENRNNDGGVEIGLALSKQEMEAFSTLFDQGLESL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02276 365 PANTHER - 3 234 - -
Tsu06g02276 365 PANTHER - 237 365 - -
Tsu06g02276 365 Pfam Transferase family 12 192 - -
Tsu06g02276 365 Pfam Transferase family 256 356 - -
Tsu06g02276 365 Gene3D - 234 365 IPR023213 -
Tsu06g02276 365 Gene3D - 6 225 IPR023213 -
Tsu06g02276 365 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 234 - -
Tsu06g02276 365 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 237 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02276 Tsu-Chr6 28721927 28723291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02276 12 210 Monolignol Biosynthesis Gene Families AT5G48930 28.019 2.56e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02276 - - pvu:PHAVU_004G040100g 378.637