Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02275 atgaaaccatttatcaactTCAAAACCTTCATCACTCTCATCTACTTTTCCATCTCCCTCCATAACCTTCAAGCCTACGACCCAATTGACCGATTTACCCTCAGTTGTGGCACAAAAGGAAACTCTACCGACGGACAAAGAATATGGACAGGAGACACAAACTCAAAACTCTTGTCATCGTTTCAAAACAACCCAACAACAATACaaaaatcatcaatcaacaaaattccTTATTCAAGAGCTCGTTTATCACACACAATATTCAACTACTCTTTTCCCGTCACTACAGGTCCTAAATTCCTCCGTCTCTTTTTCTACCCTTCTACCTATACCAACGGTTTTAACCGTTATGATGCTTCTTTCACTGTTATTTCCAATAGATTCACACTTCTCAAGGATTTTAATGCTTCATTAAACGCTGATGTCGAAGGTGTTGATACTTTGTTGAAAGAATATATCATTAACGTTGGTGATGATCAAACGCTTGATGTGAGCTTTATTCCAAGTAGTGGAAATTCTAATAACTATGCTTTCATAAATGGAATTGAAGTCATATCCATGCCTAATGATCTCTATTATACACCACCTAATGATCATGGATTTTCACTTGTGGAGACCTCTGACACACAGTATAGCATTCAAACCAACGTTGCACTAGAGACCGATTACAGGATTAGAGTTGGAGTGCAAGCAACTGAATCAAATATTCAAGACACAAACATGCTCAGAAACTGGAACTCCAACGACACAAAATATTTAAGAACACCAACATCACGTGATTTTGTCTCAGAAGACATAACAGGTACAATAAACATCACTGTAGCCCCTGATTACATAGCACCAAAAGACCTCTTCAGAACATCACGTGACTTGGGCACAAATGGCACACTCAACAAACTCTTAAACCTAACTTGGGAATTTCCCGTTGATTCTGGTTTCTATTACTTAATTAGGCTCCATTTTTGTGAACTTGATCCCAAAATAACTAACGTAGGTAATAGAGTCTTCATCATTTATTTACAAGGATGTGTGGCGGAAGATCAAGTTGATGTTATGAAATGGACCGATAATCAAAAGGGCCTAGCTGTGCATCGAAACTATGCTGTTTTTATTCCAAAGAGTGATGATTATAAGAATAGAAACAAGAAAGTTAACATCTCTCTTCAAATGCATCCTTATGGTAATGGCCGAGACAGCGAATTCAGTGATCCATTTTTAAACGGacttgaaatattcaaaataagtGATATTGGTTCGAAGAATCTAGCTGGATTCAACCCAGATCCAATTCAGGATCTGAATCAACCTCCAATACAAGAGAAAAAGAGCAAACTAAAAATAGGTGGAATGATAGTAATCGATATCGTTTTGGTAGTTGTATTCAGTGTCATTTCAATTTTGCTtgtcattttctttgttttaaggaaaaaaagagaaacaagaGGGGAAAAgactaaaatgacaaaaaagtCAAAGTCTTCAACGACTTCGAAGTGGGGTCCATTGTCGttttcaacaacaaaatcaaccaacacacaaaacTCATCTCTACCGACACATCTTTGCCGCAAATTTTCCATTCTTGAGATACGTCACGCCACAAATAACTTCGACGAACTCTTCATTGTTGGTGTCGGAGGATTCGGCCACGTGTACAAAGGTTACATCGATGAAGGTTTAACACTGGTGGCAATAAAGCGACTCAAACCAGATTCAAAACAAGGAGAAAATGAGTTCATCAATGAGATCGATATGCTTTCAAAGCTTCGTCACATTCACCTTGTTTCTTTAATCGGTTACTGCAACGAGAATAACGAAATGATCATCGTCTACGATTTCATGGTGCATGGAACATTACTCGATCATCTCTACAACACGGAGAACCCTGCTTTATCTTGGAAACAACGATTGCAAATTTCAATTGGTGCGGCGCGTGGGTTAAACTACCTTCATACAGGTGCGGACCACACAATTATTCATCGTGACGTTAAAACGACGAATATTCTATTAGATGAGAAATGGGTTGCAAAGGTTTCTGATTTTGGGCTTTCAAGAATTGGGCCTACGGGAAAATCTAAGGCCTATGTTAGCACTGTTGTTAAAGGGAGTGTTGGATATTTAGATCCGGAGTATTATAAACGACAATATTTAACAGAGAAATCTGATGTGTACTCTTTTGGCGTGGTTTTATTTGAGATATTATGTGCTCGACCACCTTTGATAAGAACTGCAGAGAAGAATCAAGTGTCACTTGTTGATTGGGGgaggttttgttataaaaatggGACTCTTGGGAGTATCGTGGACCCTTCGGTGAAGTGGAGTATAGCGCCTGAATGTTTAAGAAAAGTTGGTGAGATTGCGGTAAGTTGTTTGTTGGATGATGGAACGATGAGGCCATCGATGAATGATGTCGTTTGGATGTTGGAGTTTGCGTTGCAATTACAAGAGAGTGCAGAACAATGTAAGCCTCTCATTGTCCAGCATTCTCTTGGTCGTGAGAGTATTGTTGTTGGGATTGTGAATGATGATGTGGAAGGTGAGGGAAGAGATAAAAATGAAGACATGTTTAGTAGTGGGAGCGATGTAGGAATTCTTTCAGATTTTAATAAGAGCAATGAAGTGAGTGTGAGTACTATGACCGCTACTAGTAGTAGCGGAGAGCATAGCTATGTTTATAATAAGGAAAATGCTGTCTCATAA 2703 0.3681 MKPFINFKTFITLIYFSISLHNLQAYDPIDRFTLSCGTKGNSTDGQRIWTGDTNSKLLSSFQNNPTTIQKSSINKIPYSRARLSHTIFNYSFPVTTGPKFLRLFFYPSTYTNGFNRYDASFTVISNRFTLLKDFNASLNADVEGVDTLLKEYIINVGDDQTLDVSFIPSSGNSNNYAFINGIEVISMPNDLYYTPPNDHGFSLVETSDTQYSIQTNVALETDYRIRVGVQATESNIQDTNMLRNWNSNDTKYLRTPTSRDFVSEDITGTINITVAPDYIAPKDLFRTSRDLGTNGTLNKLLNLTWEFPVDSGFYYLIRLHFCELDPKITNVGNRVFIIYLQGCVAEDQVDVMKWTDNQKGLAVHRNYAVFIPKSDDYKNRNKKVNISLQMHPYGNGRDSEFSDPFLNGLEIFKISDIGSKNLAGFNPDPIQDLNQPPIQEKKSKLKIGGMIVIDIVLVVVFSVISILLVIFFVLRKKRETRGEKTKMTKKSKSSTTSKWGPLSFSTTKSTNTQNSSLPTHLCRKFSILEIRHATNNFDELFIVGVGGFGHVYKGYIDEGLTLVAIKRLKPDSKQGENEFINEIDMLSKLRHIHLVSLIGYCNENNEMIIVYDFMVHGTLLDHLYNTENPALSWKQRLQISIGAARGLNYLHTGADHTIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTGKSKAYVSTVVKGSVGYLDPEYYKRQYLTEKSDVYSFGVVLFEILCARPPLIRTAEKNQVSLVDWGRFCYKNGTLGSIVDPSVKWSIAPECLRKVGEIAVSCLLDDGTMRPSMNDVVWMLEFALQLQESAEQCKPLIVQHSLGRESIVVGIVNDDVEGEGRDKNEDMFSSGSDVGILSDFNKSNEVSVSTMTATSSSGEHSYVYNKENAVS 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02275 900 SUPERFAMILY Protein kinase-like (PK-like) 509 812 IPR011009 -
Tsu06g02275 900 ProSitePatterns Protein kinases ATP-binding region signature. 543 566 IPR017441 GO:0005524
Tsu06g02275 900 MobiDBLite consensus disorder prediction 880 900 - -
Tsu06g02275 900 Pfam Protein tyrosine and serine/threonine kinase 543 807 IPR001245 GO:0004672|GO:0006468
Tsu06g02275 900 Gene3D Transferase(Phosphotransferase) domain 1 614 829 - -
Tsu06g02275 900 Pfam Malectin-like domain 34 414 IPR024788 -
Tsu06g02275 900 CDD STKc_IRAK 543 810 - -
Tsu06g02275 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Tsu06g02275 900 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 17 821 - -
Tsu06g02275 900 ProSiteProfiles Protein kinase domain profile. 537 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02275 900 MobiDBLite consensus disorder prediction 482 516 - -
Tsu06g02275 900 PANTHER OS07G0166700 PROTEIN 17 821 IPR045272 GO:0004714|GO:0006468
Tsu06g02275 900 Gene3D Phosphorylase Kinase; domain 1 500 613 - -
Tsu06g02275 900 Gene3D - 31 188 - -
Tsu06g02275 900 Gene3D - 218 415 - -
Tsu06g02275 900 SMART serkin_6 537 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02275 900 MobiDBLite consensus disorder prediction 492 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02275 Tsu-Chr6 28694912 28698566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02275 26 821 Receptor kinase-like Gene Family AT3G51550 48.470 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu06g02275 Malectin_like 8.6e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02275 - - cam:101513730 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02275 06 28694912 28698566 Tsu06g02275 06 28694912 28698566 ECH