Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02273 atgaaatcaTTAATCAACTTCAAAACCATAATCATCACAACTCTCATCTACTTTTCTATCTCCCTCCATAACCTTCAAGCCTATGACCCAATTGACCGTTTTACCCTCAGTTGTGGCACAGAAGGAAAAAACTCTACCGACGGACAAAGAATATGGACAGGAGACACAAACTCAAAACTTTTGTCATCACTTCAAAACAACccaacaacaacacaaaaatcTTCAACCAACAAAATCCCATATTCAACAGCACGTTTATCACACACAATATTCAACTACTCTTTTCCCGTCACTACAGGTCCTAAATTCCTCCGTCTTTTTTTCTACCCTTCTACTTATACCAACGGTTTTAACCGTCACGACGCTTCTTTCACTGTTATTTCCAACGGTTTCACACTGCTTAAGGATTTTAATGCTTCATTAAACGCTGATGTCGAAGGTGTTGATACTTTGTTGAAAGAATATGTTATTAACGTTGGTGATGATCAAAGACTTGATTTGAGTTTTATTCCAAGTAGTGGAAATTCTAATAACTATGCTTTCATAAATGGAATTGAAGTCTTATCCATGCCTAGTGATCTTTATTATACACCACCTGATGATCCTGGATTTCCACTTGTGGGGACCACCGTCACACAATATACTATTCCAACCAACGTTGCATTAGAGACAGATTACAGGATTAGAGTTGGAGTGCAAATAAGCTCACCAAATATTCAAGACACAGGCATGCTAAGAAACTGGAACACCAATGACACATACTATTTAAAAACTCCAACATCACGTGACTTCGTATCAGGAGATGTAACACGTATAAGTAATATCACTGTAAACCCCGATTACGTGGCACCAAAAGAACTCTACAAAATGTCACGCGACTTAGGAACAAATTCCACTCTCAACAATCTCTTAAACCTAACTTGGGAATTCCCGGTTGATCCAGCCTTCACATACTTGATAAGGCTCCACTTCTGTGAACTCGACCCCAGAATAACTGAAGCAGGCGATAGAGTCTTCACCATCTATTTACAAGGACAAATGGCGTTAGAACAAGCTGATGTTATGAAATGGACCCAAAATCAAAAAGACCTTGCTGTGCAACGAAACTACGCCATTTCAATTCCAAAGAGTAATAATAACAAGAAAGtaaatctctctcttcaaatgCATCCTTTTGGTAATGGTGATAGTCGACATACCAAATTTAGTGACCCGTTTTTAAACGGacttgaaattttcaaaattagtgATAACAGTTTGCATAATCTAGCTGGACCCAACCCAGATCCGATTCAGAATCCAAATAACCCGAATGCAggtcaaaagaaaaagaaaagcacAAGTGGAACGACACTAATTGGTGTCGTTTTGGGAGCTGTATTTGGCGTCGTCTTAGTTTTCATTgttgttttcttcatttttagAAGTAAAAGGAAAACTAAAGGGGAAATGgctacaacaacaaaagaatCAAAGTCTTCCGCGACTTCGAAGTGGGGTCCACTGTCGTTTTCAACAACGAAATCAAGCAACACACAAAACTCACTGCCGTCAGATCTCTGTCGTAGTTTTTCTCTCCTCGAGATACGTGCTGCCACAAACAACTTTGATGAACTTTTCATTGTTGGTGTAGGAGGATTCGGCCACGTGTACAAAGGCTACATCGACAATGGTTCAACACCGGTCGCGATCAAGAGACTCAAACCGGGTTCACAACAAGGTGAAAATGAGTTCATTAATGAGATTGACATGCTCTCTAAGCTTCGTCACCTTCACCTCGTTTCTTTAATCGGTTACTGCAACGAGAATAATGAAATGATCATTGTTTACGATTACATGGAACGTGGAACTTTACGTGATCATCTCTACAACACGGAGAATCCTGCTTTATCATGGAAACAACGGTTGCAGATTTCGATAGGTGCTGCACGTGGGTTACATTACCTTCATACAGGTGCGAAACACACGATCATTCACCGTGATGTGAAAACGACGAATATTCTGTTAGATGAGAAATGGATGGCAAAGGTTTCTGATTTTGGGCTTTCGAGAATTGGGCCTACGGGTGTTACTAAGGCTCATGTTAGCACTGTTGTTAAAGGGAGTGTTGGGTATTTAGATCCTGAGTATTATAAACGACAACGTTTAACTGAGAAATCTGACGTGTACTCGTTTGGTGTGGTTTTATTTGAGATACTATGTGCTCGACCGCCTCTAATTAGAACCGCGGAGAAAAAACAAGTGTCACTTGCTGATTGGGGGAGGTATTGTTATAAAAATGGGACCCTGGGGAGTATAGTAGACCCTTCAGTGAAATGGAGTATCGCCCCAGAGTGTTTGAGAAAATTCGGAGAGATAGCAGTCAGCTGTTTGTTGGATGATGGAACAATGAGACCATCAATGAACGATGTTGTTTGGATGTTGGAGTTTGCATTGCAGTTACAAGAGAGTGCGGAACATCGTGAGGGTGTTGTTGTTCCGCCTACTCTTGGCCGGATTGATGACTTGGAAGTTGAGAAAAGAGGTGAAAATGATGATGTGTTTAGTAGTGGAACAAGTGTGGCACATGTTTCAGATTTTAATAAGAGTAGTGAAGTCAGTGTGAGTACAATGACTACTACTAGTAGTGGTGATAATAGCTATGGTTATAATAAGGAAAGTGTTTTCTCTGAAATTGTGGATCCAAAAGCACGTTGA 2697 0.3864 MKSLINFKTIIITTLIYFSISLHNLQAYDPIDRFTLSCGTEGKNSTDGQRIWTGDTNSKLLSSLQNNPTTTQKSSTNKIPYSTARLSHTIFNYSFPVTTGPKFLRLFFYPSTYTNGFNRHDASFTVISNGFTLLKDFNASLNADVEGVDTLLKEYVINVGDDQRLDLSFIPSSGNSNNYAFINGIEVLSMPSDLYYTPPDDPGFPLVGTTVTQYTIPTNVALETDYRIRVGVQISSPNIQDTGMLRNWNTNDTYYLKTPTSRDFVSGDVTRISNITVNPDYVAPKELYKMSRDLGTNSTLNNLLNLTWEFPVDPAFTYLIRLHFCELDPRITEAGDRVFTIYLQGQMALEQADVMKWTQNQKDLAVQRNYAISIPKSNNNKKVNLSLQMHPFGNGDSRHTKFSDPFLNGLEIFKISDNSLHNLAGPNPDPIQNPNNPNAGQKKKKSTSGTTLIGVVLGAVFGVVLVFIVVFFIFRSKRKTKGEMATTTKESKSSATSKWGPLSFSTTKSSNTQNSLPSDLCRSFSLLEIRAATNNFDELFIVGVGGFGHVYKGYIDNGSTPVAIKRLKPGSQQGENEFINEIDMLSKLRHLHLVSLIGYCNENNEMIIVYDYMERGTLRDHLYNTENPALSWKQRLQISIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWMAKVSDFGLSRIGPTGVTKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTAEKKQVSLADWGRYCYKNGTLGSIVDPSVKWSIAPECLRKFGEIAVSCLLDDGTMRPSMNDVVWMLEFALQLQESAEHREGVVVPPTLGRIDDLEVEKRGENDDVFSSGTSVAHVSDFNKSSEVSVSTMTTTSSGDNSYGYNKESVFSEIVDPKAR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02273 898 Pfam Malectin-like domain 36 415 IPR024788 -
Tsu06g02273 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Tsu06g02273 898 Pfam Protein tyrosine and serine/threonine kinase 542 805 IPR001245 GO:0004672|GO:0006468
Tsu06g02273 898 MobiDBLite consensus disorder prediction 423 445 - -
Tsu06g02273 898 ProSiteProfiles Protein kinase domain profile. 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02273 898 Gene3D - 34 191 - -
Tsu06g02273 898 Gene3D - 221 416 - -
Tsu06g02273 898 Gene3D Transferase(Phosphotransferase) domain 1 613 825 - -
Tsu06g02273 898 SUPERFAMILY Protein kinase-like (PK-like) 510 811 IPR011009 -
Tsu06g02273 898 CDD STKc_IRAK 542 809 - -
Tsu06g02273 898 MobiDBLite consensus disorder prediction 487 512 - -
Tsu06g02273 898 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Tsu06g02273 898 SMART serkin_6 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02273 898 Gene3D Phosphorylase Kinase; domain 1 500 612 - -
Tsu06g02273 898 MobiDBLite consensus disorder prediction 483 512 - -
Tsu06g02273 898 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 18 820 - -
Tsu06g02273 898 PANTHER OS07G0166700 PROTEIN 18 820 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02273 Tsu-Chr6 28679603 28683539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02273 28 898 Receptor kinase-like Gene Family AT3G51550 47.919 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu06g02273 Malectin_like 1e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02273 - - cam:101513730 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02273 06 28679603 28683539 Tsu06g02273 06 28679603 28683539 ECH