Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02262 atgaAAACAACTCGGAGAAGTAATCAAGATCAACACAGGCCGGATTCATCAAACACTCATCATtcagCATCTATTCTGGCGGAAACAATAAAGAGCTATGAAGTGTTCTTAAGTTTTAGAGGGGAAGATACTCGTGCTTCCTTCACTTCACATCTCTATGCTTCTCTTCAAAATGCTGGAATTAATGCTTTTATAGACAATCATTCGCTTCAAAGAGGAGATCACATTTCAACATCACTAATGAGAGCAATTGAACAATCTCAAATTTCTGTAATTGTTTTTTCAAGAAATTATGCAGATTCGCGATGGTGTCTAGATGAGTTGGTGAAGATAATGGAGTGTTCGGGAACGATAGGGCAGATGGTGCTTCCAGTGTTCTATGGTGTAGATCCATCTGAAGTACGTCACCAAACTGGTGAGTTTGGAAAAGCATTTCAAAGTCTATTGAATTGGATTTCACagaagaaggaagaagataAGTCGCTGAAATGGAGAGGCGCGCTTCGTGAGGCTGCTGCCCTTGCTGGCTTTGTAGTTCTGAATTCTAGGAATGAAAATGAGGATATTAAGGATATTGTTGAAAAAGTTACACGTTTACTTGACAAGGCAGACTTGTTCGTTGCTGATAATCCAGTGGGAGTTAAATCTCGAGTGCGAGATATGATTCAACTTCTAGATATCCAAACATCAAATGATAATGTTCTAATACTAGGGATGTGGGGTATGGGGGGCTCTGGTAAAACAACCATTGCAAAAGCCATTTATAATGAAATTGGTCGCAATTTTGACGGGAGGAGCTTCCTTGCAAATGTTAGGGAAGTTTGGGAGCAAACTGCAGGACAAGTACATTTACAAGAACAAATTTTGGTTGACATCTTCAAAGGAACGACAACCAAGATACAAAACATTGATTCCGGAAGAGTGATTTTAAAGGATAGACTCCGCCATAAAAAAGTACTTCTTATTCTTGACGATGTGAATGAATTGGAGCAACTGGATGCTTTGTGCGGTAGTTATAATTGGTTTGGTAAGGATAGTAGAATAATCATTACAACCAGAGATATGCATATACTTACAGGGAGTGGAGTTGAAAACATATACACAATGAAAGAAATGGATGAGGCAGAATCAATCGAGCTTTTTAGTTGGCATGCATTCAAGCAAGTCAGCCCCAAAAAAGATTTTGCTGAAATTTCAGGAAAGGTGGTTGAATATTCTGGGAGACTGCCGTTAGCTTTAAAGGTCCTTGGACGTTATTTGTTTGGTAGGCAAGCAACAGATTGGAAGTGTATACTAGCAAAACTCAAGAGAATTCCAAATGATAAAGTgcaaaataagttaaaaataagCTATGACGGATTAGATGATTTCCAAAAAGCAGTATTTCTTGACATAGCTTGTTTCTTTATTGGAATGGACAGAAATGatgttatacatatattaaatgGCTGTCAACTTTTTCCAGAAAGTGGAATAAGTGTCCTTGTTGAGCAAAGCCTTGTAACTGTTGATGACAAAAACAGGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAAAAATCATTTATGATACATCAAGAAATAAGCCAGAGAAGCGCAGCAGGTTGTGGTTTCCTGAGGATGTGCTTGATGTATTATCAGCTCAAACTGGAACAAACGCTGTTGAGGGACTGGCATTGAAGTTGCCAAGTGGTGATGCAGAATGTTTTAGTACTAAAGCCTTTGAGAAGATGAAAAAACTCAGATTGCTTCAACTTGCCGGTGTAATACTTGATGGAGATTTTGAACATCTTTCAAGTAAATTGAGATGGCTGAGTTGGAATGGATTTCCTTTAAGTTGCATACCTACAAACTTTTATCAAGGAAATTTAGTTTCCATTGAGTTAGAAAATAGTAATCTCGAGCTTGTGTGGATAGAGACCCAGAGGATGGATAATCTGAAAATTCTCAATCTTAGTCATTCTCACCATCTCACACGAAGCCCTGACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCATTGTTGTCTGAGATTGAGAAGCTGGAAGAGGACGTGGAACAAATGAAATCTTTAACCACCTTGTTTGCAAATAGCACTGCAATAACAACAGTAGCCCTTTCAATAGCGAtggaaaatttgaaatttctcaATCTTAGCCATTGTCGTTGTCTGACACACACCCCAGACTTTTCATACCTGCCTAATCTTGAAAAGCTAGAACTCAAAAATTGTCCAATGTTGTACGAGATTTCTCCTGGCATTGAACATCTTGAAAAACTTCTTCTGATGAATTTGGAAGACTGTACTAGCCTACGTAGCCTCCCAAGAAGCATCTATAAGTTAAAATTGTTGGAAACTCTCATTCTTTCTGGTTGTTTAATGATTGACAAGTTAGATGATAACTTGGATCTGATGGAATCATTAGCCACTCTGCATGCAAAAAACACTTCAATAACGCATGTACCCTTTTCACTAGTAAGGTCGAAAAGCATTGAATATATCTCCATGTGCGGCTATGAAGGATTTTCACAGGATACCTTTCCATCTATCATTTTATCTTGGATGTCACCAAGAAATCGTGTCATATCTCGAGTTCAAGCATCTGCTGCCATGTCATCTATTGTTTCTATAGATGTACTAAGTAGTAGTTTACATGTACTATCATATTTTTTGAACCAACTTCTATGGCTTCGAAGTATTTGGGTGGATTGCAACTCCGTAGATCAACTTAATGTAGATGCAAAACTAATTTTGGATGCTTTAGATTATTGTTGCAGTCAATTGCACGTTTCAGGATCAAAACATTCTTTTAAGTCTCTTTTAATTCAAATGGGAATGAATTGCCAGGTCGCCAATATTCTGAAAGAGATAATTCTGCAGAATATGGATGTCAACGGGAGTGGTGGTTTCCTCCCCGGTGATAGTTCTCCAGATTGGTTTACTTTTAAGTCTGAAGGTTCTTCAGTAACTTTAGAAGTTCCTCAAATAGAAGGGCGTAACTTGAAGTCAATGATGTGCATTGTCGATATTTCAATCTCAGATAACACAACATCAGATGGCCTTAGAAACATGTTAGTGAAAAATTACACAAAGGCCACCATTCAACTCTATACGAGAGAGGCATTAGTCTCCTTTGAAGATGAAGAGTGGAAGAGGCTAGTATCAACTATAAAACCCGGTAACAAAGTGGAGGTCGTTTTTGTTTTCGAGAATGATTTCCTTGTGAAGAATACAACTGTTTATCTTGTATACGAAGAACCAATTGACAAAAAGAACataatgaagaaaaattcaatagCAGTTTATCTGGTATATGATGCACATGATTTGAATGTTGCTTGTAGAGGTGATGGAAACGAATGCTCTGTGAAGAGATTCTTTACTGAAGATGAGCCCACTGATGACTTCAATCAGaacagaaagaagaaaaatcgaGTGGAGTGA 3465 0.3691 MKTTRRSNQDQHRPDSSNTHHSASILAETIKSYEVFLSFRGEDTRASFTSHLYASLQNAGINAFIDNHSLQRGDHISTSLMRAIEQSQISVIVFSRNYADSRWCLDELVKIMECSGTIGQMVLPVFYGVDPSEVRHQTGEFGKAFQSLLNWISQKKEEDKSLKWRGALREAAALAGFVVLNSRNENEDIKDIVEKVTRLLDKADLFVADNPVGVKSRVRDMIQLLDIQTSNDNVLILGMWGMGGSGKTTIAKAIYNEIGRNFDGRSFLANVREVWEQTAGQVHLQEQILVDIFKGTTTKIQNIDSGRVILKDRLRHKKVLLILDDVNELEQLDALCGSYNWFGKDSRIIITTRDMHILTGSGVENIYTMKEMDEAESIELFSWHAFKQVSPKKDFAEISGKVVEYSGRLPLALKVLGRYLFGRQATDWKCILAKLKRIPNDKVQNKLKISYDGLDDFQKAVFLDIACFFIGMDRNDVIHILNGCQLFPESGISVLVEQSLVTVDDKNRLGMHDLLRDMGRKIIYDTSRNKPEKRSRLWFPEDVLDVLSAQTGTNAVEGLALKLPSGDAECFSTKAFEKMKKLRLLQLAGVILDGDFEHLSSKLRWLSWNGFPLSCIPTNFYQGNLVSIELENSNLELVWIETQRMDNLKILNLSHSHHLTRSPDFSNMPNLEKLVLKDCPLLSEIEKLEEDVEQMKSLTTLFANSTAITTVALSIAMENLKFLNLSHCRCLTHTPDFSYLPNLEKLELKNCPMLYEISPGIEHLEKLLLMNLEDCTSLRSLPRSIYKLKLLETLILSGCLMIDKLDDNLDLMESLATLHAKNTSITHVPFSLVRSKSIEYISMCGYEGFSQDTFPSIILSWMSPRNRVISRVQASAAMSSIVSIDVLSSSLHVLSYFLNQLLWLRSIWVDCNSVDQLNVDAKLILDALDYCCSQLHVSGSKHSFKSLLIQMGMNCQVANILKEIILQNMDVNGSGGFLPGDSSPDWFTFKSEGSSVTLEVPQIEGRNLKSMMCIVDISISDNTTSDGLRNMLVKNYTKATIQLYTREALVSFEDEEWKRLVSTIKPGNKVEVVFVFENDFLVKNTTVYLVYEEPIDKKNIMKKNSIAVYLVYDAHDLNVACRGDGNECSVKRFFTEDEPTDDFNQNRKKKNRVE 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02262 1154 Gene3D - 204 364 IPR027417 -
Tsu06g02262 1154 SUPERFAMILY L domain-like 511 919 - -
Tsu06g02262 1154 Pfam NB-ARC domain 218 446 IPR002182 GO:0043531
Tsu06g02262 1154 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 715 1090 - -
Tsu06g02262 1154 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 39 688 - -
Tsu06g02262 1154 ProSiteProfiles TIR domain profile. 31 200 IPR000157 GO:0007165
Tsu06g02262 1154 SMART till_3 32 174 IPR000157 GO:0007165
Tsu06g02262 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 176 IPR035897 -
Tsu06g02262 1154 Gene3D Ribonuclease Inhibitor 688 969 IPR032675 -
Tsu06g02262 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 715 1090 IPR044974 GO:0006952
Tsu06g02262 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 688 IPR044974 GO:0006952
Tsu06g02262 1154 Gene3D - 29 203 IPR035897 -
Tsu06g02262 1154 Gene3D - 371 455 IPR042197 -
Tsu06g02262 1154 Gene3D Ribonuclease Inhibitor 562 687 IPR032675 -
Tsu06g02262 1154 MobiDBLite consensus disorder prediction 1 21 - -
Tsu06g02262 1154 CDD AAA 217 354 - -
Tsu06g02262 1154 Pfam TIR domain 33 197 IPR000157 GO:0007165
Tsu06g02262 1154 PRINTS Disease resistance protein signature 643 659 - -
Tsu06g02262 1154 PRINTS Disease resistance protein signature 313 327 - -
Tsu06g02262 1154 PRINTS Disease resistance protein signature 406 420 - -
Tsu06g02262 1154 PRINTS Disease resistance protein signature 236 251 - -
Tsu06g02262 1154 MobiDBLite consensus disorder prediction 1 17 - -
Tsu06g02262 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 465 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02262 Tsu-Chr6 28561496 28569786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02262 31 832 WRKY Transcription Factor Family AT4G12020 29.426 9.59e-93 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02262 - - mtr:MTR_6g015775 1331.24