Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02253 ATGTACTTTTTCTACGGTTTCATATTTTTTAGGAATGAGAATGATGCTATCAAGGATATTGTTGAAAATGTTATACGTTTGCTCAACAAGACAGACTTGTTCATTGCTGAAAAGCCCGTGGGAGTCGAGTCTCGAGTTGAAAATATGATTCACTTGCTAGACATCCAACAATCAAATGATGTTTTACTACTAGGGATGTGGGGTATGGGAGGTATTGGTAAAACAACTATTGCAAAAGCTATCTACAATAAAATTGGCCGCAATTTTGATGGTAGGAGCTTTCTTGCAAATATTAGAGAAGTTTGGGAGCAAATTGTTGGACAAGTGTCTTTACAAGAACAAATTCTCTTTGATATCTGCAAAGAAACAACTAAGATACAAAACATTGAATCGGGAAAAGTTATATTAAAAGATAGACTCCGCCATAAAAGAATACTTCTTGTACTTGATGATATTAATACATTGGACCAATTGAATGCTTTGTGTGGATGTCGTGAATACCTTGGTCCAGGGAGTAGAATAATCATCACAACTAGAGATATGCATATTATGAGAGGGAATAGAGTTGATCGAGTatacaaaatgaaagaaatggaTGAAATTGAGTCAATTGAGCTTTTCAGTTGGCATGCATTCAAGCAAGCAAGTCCCAATGaagattttgttgaaatttccAAAACTGTAATTGAGTATTCTGGGGGTTTGCCTCTAGCTTTGGAAGTCCTTGGGTCATATTTGTTTGATAGGAGTGTAACAGAGTGGAAGTGTGCAttgaaaaaactcaaaagaatTCCTAATGATCAAgtacaaaagaaattaaaaataagctaCGATGGTTTAAATGATGACGCTGAGAAAGAAATATTTCTTGATATAGCTTGTTTCTTTATTGGAATGGATCGAAATGATGTTATACAAATATTAGATGGTTGTGAACTTTATGGAGAAATTGGAATAAGTGTTCTTGTTGAGCGAAGCCTTGTTATCGTTGATGATAAAAATAGGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCGCCGAAGGTGCCTGAGGGGCGCAGCAGGTTGTGGTTTAACAAGGATGTACTTGATGTGTTATCGGAACAAACTGGAACAAAAGCTATTGAGGGAATGACTTTGAAGTTGTCAAAAGCTAATGCAAAATGTTTTAGGACTGAAGCATTTAAGAAGATGAAAAGACTCAGATTGCTTCAATTGGCTGGTGTAGAACTTGATGGAAATTTTGAATATCTTTCAAGATATCTAAGATGGCTGTCTTGGAATGGATTTCCTTTAACATACTTACCGGCaaaatttcaccaaaaaaatttaatttccatTGAGTTAGAAAACAGCAATGTCAGAGTCTTGTGGCATGATTCCCTGCGGCTGGAGAAACTGAAGATTCTCAATCTTAGTCATTCTCATCATCTGACACAGACACCTGACTTTTCATACTTGCCTAATCTTGAAAAGTTAGTACTTGTGGATTGTCCAAGGCTGACTGAGATTTGCCATAGCATTGGAGATCTCGAAAAAGTTATTCTGATCAATTTGGAAGATTGCATTAGCCTTCGCAAGCTTCCCAGAACCATTTATAAgttgaaatgtttgaaaactCTCATTCTTTCTGGATGCTTAATGATTAACAAGTTGGAAGAGGACTTAGAACAAATGGAATCTTTAACCACCCTCATTGCAAATGACACAGCAATTACAAAAGTACCATTTTCAGTATTAAGGTCAAAAAGCATTGGATATATTTCTATGTGCGGCCATGAAGGAATTTCACGTAATGTGTTTCCTTCTATCATTTGGTCGTGGATGTCACCGACAAATAATCTCCCATCTCCATTCCAAACATCTGATGGCATGTCATCTCTTGTTCCTTTAGATTTACCAAATAGTAGTTGCCAGGAACTATCATCTATTACCAGGTACATTCCATTGCTTCGAAGTCTCTGGTTGGAGTGCGGCACACAACTTCAACTTTCTCTAGACGCAGACAAAATTTTGGATGTCTTGTATGCCACAAATTCTAAAGAATTGGAATCATCTGCTACATCACAagtattaaatatgaaaacttCTGCACTAATTCAATGTTGCAGTCAAGTTCACATTTCAGGATCAAAAACTTCCATGAAATATCTTTTAATTCAAATGGGAATGAATTGCCAAGTCACCAACATTTTGAAAGACAAAATTTTACAGAATATGGATGTCAATGGGCATGGTGGTTGTTTGCTCCTCGGTGATAGTTATCCAGATTGGTTAACCTTCAACTGCAAAGGTTCTTCTGTAATTTTTGAAGTCCCTCGAGTGCAAGGGCGTAACTTAAAGACAATAATGTGCATTGTCTATTCTTCAACTTCAGAAAACATAGCATCAGATGGCCTTAAAAACGTGATGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGAGAGTCATTATTCTCATTTGAAGATGAGGATGGGAAGAGATTAGTATCAAGTATAGATCCTGGTAATAAAATGgagattgttgttgtttttgagaaCAATTTCATTGTGAAGAATACAACAATTTATCTCATATATGATGAACCAATTTGCAAAAAAATTGGCTTCATTCTGAATTGA 2655 0.345 MYFFYGFIFFRNENDAIKDIVENVIRLLNKTDLFIAEKPVGVESRVENMIHLLDIQQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFDGRSFLANIREVWEQIVGQVSLQEQILFDICKETTKIQNIESGKVILKDRLRHKRILLVLDDINTLDQLNALCGCREYLGPGSRIIITTRDMHIMRGNRVDRVYKMKEMDEIESIELFSWHAFKQASPNEDFVEISKTVIEYSGGLPLALEVLGSYLFDRSVTEWKCALKKLKRIPNDQVQKKLKISYDGLNDDAEKEIFLDIACFFIGMDRNDVIQILDGCELYGEIGISVLVERSLVIVDDKNRLGMHDLLRDMGREIIREKSPKVPEGRSRLWFNKDVLDVLSEQTGTKAIEGMTLKLSKANAKCFRTEAFKKMKRLRLLQLAGVELDGNFEYLSRYLRWLSWNGFPLTYLPAKFHQKNLISIELENSNVRVLWHDSLRLEKLKILNLSHSHHLTQTPDFSYLPNLEKLVLVDCPRLTEICHSIGDLEKVILINLEDCISLRKLPRTIYKLKCLKTLILSGCLMINKLEEDLEQMESLTTLIANDTAITKVPFSVLRSKSIGYISMCGHEGISRNVFPSIIWSWMSPTNNLPSPFQTSDGMSSLVPLDLPNSSCQELSSITRYIPLLRSLWLECGTQLQLSLDADKILDVLYATNSKELESSATSQVLNMKTSALIQCCSQVHISGSKTSMKYLLIQMGMNCQVTNILKDKILQNMDVNGHGGCLLLGDSYPDWLTFNCKGSSVIFEVPRVQGRNLKTIMCIVYSSTSENIASDGLKNVMVKNYTKATIQLYKRESLFSFEDEDGKRLVSSIDPGNKMEIVVVFENNFIVKNTTIYLIYDEPICKKIGFILN 884
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02253 884 PRINTS Disease resistance protein signature 63 78 - -
Tsu06g02253 884 PRINTS Disease resistance protein signature 232 246 - -
Tsu06g02253 884 PRINTS Disease resistance protein signature 470 486 - -
Tsu06g02253 884 PRINTS Disease resistance protein signature 139 153 - -
Tsu06g02253 884 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 9 870 - -
Tsu06g02253 884 Gene3D - 20 191 IPR027417 -
Tsu06g02253 884 Gene3D Ribonuclease Inhibitor 369 750 IPR032675 -
Tsu06g02253 884 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 870 IPR044974 GO:0006952
Tsu06g02253 884 SUPERFAMILY "Winged helix" DNA-binding domain 268 374 IPR036390 -
Tsu06g02253 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 292 IPR027417 -
Tsu06g02253 884 Gene3D - 198 281 IPR042197 -
Tsu06g02253 884 CDD AAA 40 191 - -
Tsu06g02253 884 Pfam NB-ARC domain 43 277 IPR002182 GO:0043531
Tsu06g02253 884 SUPERFAMILY L domain-like 387 690 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu06g02253 Tsu-Chr6 28391038 28395211 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02253 11 587 WRKY Transcription Factor Family AT4G12020 33.165 1.36e-75 268
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02253 - - cam:101494533 1306.58