Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g02253 | ATGTACTTTTTCTACGGTTTCATATTTTTTAGGAATGAGAATGATGCTATCAAGGATATTGTTGAAAATGTTATACGTTTGCTCAACAAGACAGACTTGTTCATTGCTGAAAAGCCCGTGGGAGTCGAGTCTCGAGTTGAAAATATGATTCACTTGCTAGACATCCAACAATCAAATGATGTTTTACTACTAGGGATGTGGGGTATGGGAGGTATTGGTAAAACAACTATTGCAAAAGCTATCTACAATAAAATTGGCCGCAATTTTGATGGTAGGAGCTTTCTTGCAAATATTAGAGAAGTTTGGGAGCAAATTGTTGGACAAGTGTCTTTACAAGAACAAATTCTCTTTGATATCTGCAAAGAAACAACTAAGATACAAAACATTGAATCGGGAAAAGTTATATTAAAAGATAGACTCCGCCATAAAAGAATACTTCTTGTACTTGATGATATTAATACATTGGACCAATTGAATGCTTTGTGTGGATGTCGTGAATACCTTGGTCCAGGGAGTAGAATAATCATCACAACTAGAGATATGCATATTATGAGAGGGAATAGAGTTGATCGAGTatacaaaatgaaagaaatggaTGAAATTGAGTCAATTGAGCTTTTCAGTTGGCATGCATTCAAGCAAGCAAGTCCCAATGaagattttgttgaaatttccAAAACTGTAATTGAGTATTCTGGGGGTTTGCCTCTAGCTTTGGAAGTCCTTGGGTCATATTTGTTTGATAGGAGTGTAACAGAGTGGAAGTGTGCAttgaaaaaactcaaaagaatTCCTAATGATCAAgtacaaaagaaattaaaaataagctaCGATGGTTTAAATGATGACGCTGAGAAAGAAATATTTCTTGATATAGCTTGTTTCTTTATTGGAATGGATCGAAATGATGTTATACAAATATTAGATGGTTGTGAACTTTATGGAGAAATTGGAATAAGTGTTCTTGTTGAGCGAAGCCTTGTTATCGTTGATGATAAAAATAGGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCGCCGAAGGTGCCTGAGGGGCGCAGCAGGTTGTGGTTTAACAAGGATGTACTTGATGTGTTATCGGAACAAACTGGAACAAAAGCTATTGAGGGAATGACTTTGAAGTTGTCAAAAGCTAATGCAAAATGTTTTAGGACTGAAGCATTTAAGAAGATGAAAAGACTCAGATTGCTTCAATTGGCTGGTGTAGAACTTGATGGAAATTTTGAATATCTTTCAAGATATCTAAGATGGCTGTCTTGGAATGGATTTCCTTTAACATACTTACCGGCaaaatttcaccaaaaaaatttaatttccatTGAGTTAGAAAACAGCAATGTCAGAGTCTTGTGGCATGATTCCCTGCGGCTGGAGAAACTGAAGATTCTCAATCTTAGTCATTCTCATCATCTGACACAGACACCTGACTTTTCATACTTGCCTAATCTTGAAAAGTTAGTACTTGTGGATTGTCCAAGGCTGACTGAGATTTGCCATAGCATTGGAGATCTCGAAAAAGTTATTCTGATCAATTTGGAAGATTGCATTAGCCTTCGCAAGCTTCCCAGAACCATTTATAAgttgaaatgtttgaaaactCTCATTCTTTCTGGATGCTTAATGATTAACAAGTTGGAAGAGGACTTAGAACAAATGGAATCTTTAACCACCCTCATTGCAAATGACACAGCAATTACAAAAGTACCATTTTCAGTATTAAGGTCAAAAAGCATTGGATATATTTCTATGTGCGGCCATGAAGGAATTTCACGTAATGTGTTTCCTTCTATCATTTGGTCGTGGATGTCACCGACAAATAATCTCCCATCTCCATTCCAAACATCTGATGGCATGTCATCTCTTGTTCCTTTAGATTTACCAAATAGTAGTTGCCAGGAACTATCATCTATTACCAGGTACATTCCATTGCTTCGAAGTCTCTGGTTGGAGTGCGGCACACAACTTCAACTTTCTCTAGACGCAGACAAAATTTTGGATGTCTTGTATGCCACAAATTCTAAAGAATTGGAATCATCTGCTACATCACAagtattaaatatgaaaacttCTGCACTAATTCAATGTTGCAGTCAAGTTCACATTTCAGGATCAAAAACTTCCATGAAATATCTTTTAATTCAAATGGGAATGAATTGCCAAGTCACCAACATTTTGAAAGACAAAATTTTACAGAATATGGATGTCAATGGGCATGGTGGTTGTTTGCTCCTCGGTGATAGTTATCCAGATTGGTTAACCTTCAACTGCAAAGGTTCTTCTGTAATTTTTGAAGTCCCTCGAGTGCAAGGGCGTAACTTAAAGACAATAATGTGCATTGTCTATTCTTCAACTTCAGAAAACATAGCATCAGATGGCCTTAAAAACGTGATGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGAGAGTCATTATTCTCATTTGAAGATGAGGATGGGAAGAGATTAGTATCAAGTATAGATCCTGGTAATAAAATGgagattgttgttgtttttgagaaCAATTTCATTGTGAAGAATACAACAATTTATCTCATATATGATGAACCAATTTGCAAAAAAATTGGCTTCATTCTGAATTGA | 2655 | 0.345 | MYFFYGFIFFRNENDAIKDIVENVIRLLNKTDLFIAEKPVGVESRVENMIHLLDIQQSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFDGRSFLANIREVWEQIVGQVSLQEQILFDICKETTKIQNIESGKVILKDRLRHKRILLVLDDINTLDQLNALCGCREYLGPGSRIIITTRDMHIMRGNRVDRVYKMKEMDEIESIELFSWHAFKQASPNEDFVEISKTVIEYSGGLPLALEVLGSYLFDRSVTEWKCALKKLKRIPNDQVQKKLKISYDGLNDDAEKEIFLDIACFFIGMDRNDVIQILDGCELYGEIGISVLVERSLVIVDDKNRLGMHDLLRDMGREIIREKSPKVPEGRSRLWFNKDVLDVLSEQTGTKAIEGMTLKLSKANAKCFRTEAFKKMKRLRLLQLAGVELDGNFEYLSRYLRWLSWNGFPLTYLPAKFHQKNLISIELENSNVRVLWHDSLRLEKLKILNLSHSHHLTQTPDFSYLPNLEKLVLVDCPRLTEICHSIGDLEKVILINLEDCISLRKLPRTIYKLKCLKTLILSGCLMINKLEEDLEQMESLTTLIANDTAITKVPFSVLRSKSIGYISMCGHEGISRNVFPSIIWSWMSPTNNLPSPFQTSDGMSSLVPLDLPNSSCQELSSITRYIPLLRSLWLECGTQLQLSLDADKILDVLYATNSKELESSATSQVLNMKTSALIQCCSQVHISGSKTSMKYLLIQMGMNCQVTNILKDKILQNMDVNGHGGCLLLGDSYPDWLTFNCKGSSVIFEVPRVQGRNLKTIMCIVYSSTSENIASDGLKNVMVKNYTKATIQLYKRESLFSFEDEDGKRLVSSIDPGNKMEIVVVFENNFIVKNTTIYLIYDEPICKKIGFILN | 884 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g02253 | 884 | PRINTS | Disease resistance protein signature | 63 | 78 | - | - | |
Tsu06g02253 | 884 | PRINTS | Disease resistance protein signature | 232 | 246 | - | - | |
Tsu06g02253 | 884 | PRINTS | Disease resistance protein signature | 470 | 486 | - | - | |
Tsu06g02253 | 884 | PRINTS | Disease resistance protein signature | 139 | 153 | - | - | |
Tsu06g02253 | 884 | PANTHER | RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED | 9 | 870 | - | - | |
Tsu06g02253 | 884 | Gene3D | - | 20 | 191 | IPR027417 | - | |
Tsu06g02253 | 884 | Gene3D | Ribonuclease Inhibitor | 369 | 750 | IPR032675 | - | |
Tsu06g02253 | 884 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 9 | 870 | IPR044974 | GO:0006952 | |
Tsu06g02253 | 884 | SUPERFAMILY | "Winged helix" DNA-binding domain | 268 | 374 | IPR036390 | - | |
Tsu06g02253 | 884 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 30 | 292 | IPR027417 | - | |
Tsu06g02253 | 884 | Gene3D | - | 198 | 281 | IPR042197 | - | |
Tsu06g02253 | 884 | CDD | AAA | 40 | 191 | - | - | |
Tsu06g02253 | 884 | Pfam | NB-ARC domain | 43 | 277 | IPR002182 | GO:0043531 | |
Tsu06g02253 | 884 | SUPERFAMILY | L domain-like | 387 | 690 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g02253 | Tsu-Chr6 | 28391038 | 28395211 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g02253 | 11 | 587 | WRKY Transcription Factor Family | AT4G12020 | 33.165 | 1.36e-75 | 268 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g02253 | - | - | cam:101494533 | 1306.58 |