Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02252 ATGTCTTCTTCCTTTAGCTTCCCCAATCTTCTAAATGATACATACACAAAGAATCCATCCAAAGCAATAAGGATACATGATGTGTTCTTAAGTTTCAGAGGCGAAGACACACGTGCTTCCTTCACTTCACATCTTAACACTTCTCTTCTAAATGCTGGAATTAAAGTTTTTAGGGACGATGATTCGCTTCAAAGAGGAGATATCATTTCAACATCGATAAATAGAGCAATTGAACAATCACAAATTGCTGTGATTGTTTTCTCAAAGAATTATGCAGATTCACGATGGTGTCTGGACGAGTTGGTGAGGATAATGGAGTGTTCCAAATCCATTGGACAGGTTGTTTTGCCGGTGTTCTACGGTGTAGATCCTTCGGAAGTCCGTCACCAAAATGGTGAGTTTGGTAGAGCATTCCAAAGTCTCCTGACTAGACTATCAAATATAAAAGGACTTTTCAAAGTGTTAAACTTTAAATCCGGATCGCCGAATCTGGAGCAAGAACGGAGTTGGAAAGCAGCGCTTCATGAGGTAGCAGGGTTTGCAGGATTTGTAGTACTAAATTCCAGGAACGAAAGTAAGGCTATAAAGGATATTGTTGAAAAAATTGTGCGTTTGGTAAACAAGACAGACTTGTTCGTTGCTAATAATCCAGTGGGAGTTGAACCTCGTGTGGAAGATATGATTCAATTGTTAGACAAAAAAATACCACAACACTTCCAACCAATGCAAGCTCCAATTCAACCGCTTCAGTTCCAACCAGTGCAAGCTCCGGTTCAACCGCTACACTTCAAACCAGTTCAAGCTCCGTTTCAACCGCTACACTTCAATCCAATTCAAGCTCCGGTTCAACGGCAACAGTTCCAACCAGTGCAAGCTCCAGTTCAACAGCAACAGTTCCAACAAATGCAAGCTCCAAACCTACAATCAAAAGATGTTGTACTAATAGGGATGTGGGGTATGGGAGGCATTGGCAAAACCACTATCGCAAAAGCCATTTACAATAAAATTGGCCGCAACTTTGATGGTAGGAGCTTCCTTGCAAATATTAGGGAAGCTTGGGAGCAAAATATTGGACAAGTGTCTTTACAAGAACGAATTCTCTTGGATGTTTGCAAAGAAACTACGAACAAGATACAAAACATCGAGGAAggaaaaaataagttaaaggaTAGACTCTGCCATAAGAAAGTACTTCTTGTACTTGATGATGTGAATACAATGGATCAGTTGAATGCTTTGTGTGGAAGTCGTCAATGGTTTGGTTCGGGTAGTAGAATAATTATCATAACTAGGGATATGCATGTTCTAAGAGGGAACAGAGTTGATCAAGTATACACAATGAAAGAAATGGGTGAAAGTGAATCAATTGAGCTTTTTAGTTGGCATGCTTTCAAACAAGCGAGCCCCAGTGTAGATTTTGCTGAAATTTCAGGAAATTTAGTGGACTATTCCGGGGGATTGCCGCTAGCTCTTGAAGTCCTTGGGTCATATTTGTTTGATAGGGGGATAACAGAATGGGAGAGTGTATTGGAAAAACTCAAAAAGATTCCTAATGATCAAGGAACAAAAGTTGTTGAAGGCCTAACTTTGAAGTTGCGAAGAGCTGAAACAAAATGTTTTAGTACAAAAGCATTTACAAATATGACAAGGCTGAGATTGCTTCAACTTGTTGGAGTGCAACTTGATGGGGATTTTGAGTACCTTTCAAGAAATTTGAGATGGCTTTCTTGGAATGGATTTCCTTTAACAAGCATACCTACAAGCTTTTATCTAGGAAATTTAGTTTCCATTGAGTTAGTTAACAGCAATGTCGAATTTCTATGGAAAAAGGCCCAgAGGATGGAGAAGTTGAAAATTCTAAACCTTAGTCATTCTCATTCGCTGAAACAGACCCCGAACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTCACTGATTGTCCAATGCTGTCTGAGATTTCTCCTAGCATTGTACATCTCAATGAAGTTCTTCTGATAAATTTGAAAGACTGTGTTAACATACGTAGCCTCCCAAGAAGCATATACAAGTTAAAATCTTTGAACACTCTTATTCTTTCTGGGTGTTTAAAGATTGACAAGTTGGAAGAAGACTTAGAAGATATGAAATCTTTAACCACCTTACTTGCAAATAATACAGCAATAGCCCGAGTTCCCTTTTCAGTAGTAAGGTCGAAAAGCATTGGATATATTTCTTTGTGCGGTTATGAAGGATTCTCACATGATGTATTTCCAGCTATCATTTGGTCTTGGATGTCACCGACAAATAATCTCCCATCCCCGTTTCAAACACCTGCCGGCATGTCATCTTTTGTTCCTTTAGATGTACAAAATAGTAGTTCCCATGAACTATCATCTATATCCAAGTACCTTCCATGGCTTCGATGTCTTTTGGTGGAGTGTGACTCAGAACTTCAACTTTCTCGAGacacaaaaataatattgaatgCCTTATATGCCTCAAATTCTAAAGAATTGGAATCAACTGCTACTTCACAAGTATCGAATGTGAAAACTTCTGCACTAATTCAATGCTACAGTCAAGTATTGAATGTGAAATCTCTGTTTATTCAAATTGGAATGAATTGCCATGTCACCAAGATTCTGAAAGACATCATTTTACAGAATATGGGTGTAAGCGAGCGTGGTGGTCAATTGCTCCCTGGTGATAGTTATCCAGATTGGTTGAACTTCAATTTCAAAGGTTCTTCTGTAATTTTTGAAGTCCCTCGAGTGCAAGGGCGTAACTTAAAGACAATGGTATGCATTACCTATTCTTCAACACCTGATAACATAGCATCAGATGGACTTAAAAATGTGTTGGTAAAAAATTACTCAAAGGCCACCATTCAACTCTATAAGAGAGAGGCGTTAGTCTCTTTTGAAGATGAGGAGGGCGAGAGGGTAGTCTCGAGTATAGAACCTGGAAATAAAGTAGAGGTTGTTGTAGTTTTTGAGAAAGAGTTTGTTGTGAAGGAAACAATAGTTTATCTTGTATATGATGAACCAATTggagaaaaaatgaagaaatgtCAAGAACAAGAAAAAAGTGATATTGTTTATAGTGGTGATGATAATGAAGGCATTGTGAGGACAAGCTCTCCGGAAGTGGAACTCGTGGATGAAAATGGTGGCGCTGCTAGTTGTTGTGGATTGATCAAATATAGTTTCAGACAGTGGATTACAGATTTTATGTGCAGATTGGTCGAGTGCAGGTGA 3240 0.3821 MSSSFSFPNLLNDTYTKNPSKAIRIHDVFLSFRGEDTRASFTSHLNTSLLNAGIKVFRDDDSLQRGDIISTSINRAIEQSQIAVIVFSKNYADSRWCLDELVRIMECSKSIGQVVLPVFYGVDPSEVRHQNGEFGRAFQSLLTRLSNIKGLFKVLNFKSGSPNLEQERSWKAALHEVAGFAGFVVLNSRNESKAIKDIVEKIVRLVNKTDLFVANNPVGVEPRVEDMIQLLDKKIPQHFQPMQAPIQPLQFQPVQAPVQPLHFKPVQAPFQPLHFNPIQAPVQRQQFQPVQAPVQQQQFQQMQAPNLQSKDVVLIGMWGMGGIGKTTIAKAIYNKIGRNFDGRSFLANIREAWEQNIGQVSLQERILLDVCKETTNKIQNIEEGKNKLKDRLCHKKVLLVLDDVNTMDQLNALCGSRQWFGSGSRIIIITRDMHVLRGNRVDQVYTMKEMGESESIELFSWHAFKQASPSVDFAEISGNLVDYSGGLPLALEVLGSYLFDRGITEWESVLEKLKKIPNDQGTKVVEGLTLKLRRAETKCFSTKAFTNMTRLRLLQLVGVQLDGDFEYLSRNLRWLSWNGFPLTSIPTSFYLGNLVSIELVNSNVEFLWKKAQRMEKLKILNLSHSHSLKQTPNFSNMPNLEKLVLTDCPMLSEISPSIVHLNEVLLINLKDCVNIRSLPRSIYKLKSLNTLILSGCLKIDKLEEDLEDMKSLTTLLANNTAIARVPFSVVRSKSIGYISLCGYEGFSHDVFPAIIWSWMSPTNNLPSPFQTPAGMSSFVPLDVQNSSSHELSSISKYLPWLRCLLVECDSELQLSRDTKIILNALYASNSKELESTATSQVSNVKTSALIQCYSQVLNVKSLFIQIGMNCHVTKILKDIILQNMGVSERGGQLLPGDSYPDWLNFNFKGSSVIFEVPRVQGRNLKTMVCITYSSTPDNIASDGLKNVLVKNYSKATIQLYKREALVSFEDEEGERVVSSIEPGNKVEVVVVFEKEFVVKETIVYLVYDEPIGEKMKKCQEQEKSDIVYSGDDNEGIVRTSSPEVELVDENGGAASCCGLIKYSFRQWITDFMCRLVECR 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02252 1079 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 141 IPR035897 -
Tsu06g02252 1079 Gene3D Ribonuclease Inhibitor 526 670 IPR032675 -
Tsu06g02252 1079 Coils Coil 371 391 - -
Tsu06g02252 1079 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 286 520 - -
Tsu06g02252 1079 Pfam TIR domain 26 204 IPR000157 GO:0007165
Tsu06g02252 1079 Pfam NB-ARC domain 309 515 IPR002182 GO:0043531
Tsu06g02252 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 286 520 IPR044974 GO:0006952
Tsu06g02252 1079 PRINTS Disease resistance protein signature 391 405 - -
Tsu06g02252 1079 PRINTS Disease resistance protein signature 314 329 - -
Tsu06g02252 1079 PRINTS Disease resistance protein signature 612 628 - -
Tsu06g02252 1079 PRINTS Disease resistance protein signature 484 498 - -
Tsu06g02252 1079 ProSiteProfiles TIR domain profile. 24 206 IPR000157 GO:0007165
Tsu06g02252 1079 Gene3D Ribonuclease Inhibitor 671 858 IPR032675 -
Tsu06g02252 1079 Coils Coil 699 719 - -
Tsu06g02252 1079 Gene3D - 22 214 IPR035897 -
Tsu06g02252 1079 Gene3D - 280 444 IPR027417 -
Tsu06g02252 1079 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 531 1007 - -
Tsu06g02252 1079 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 32 233 - -
Tsu06g02252 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 308 530 IPR027417 -
Tsu06g02252 1079 SUPERFAMILY L domain-like 528 829 - -
Tsu06g02252 1079 Gene3D - 450 525 IPR042197 -
Tsu06g02252 1079 SMART till_3 25 161 IPR000157 GO:0007165
Tsu06g02252 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 531 1007 IPR044974 GO:0006952
Tsu06g02252 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 233 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02252 Tsu-Chr6 28385047 28389835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02252 544 689 WRKY Transcription Factor Family AT5G45050 30.968 5.03e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02252 - - cam:101512894 779.245