Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02250 ATGGATGAAAGTGAATCAACTGAGCTTTTTAGCTGGCATGAATTCAAGCAAGAAAGGCCTAGAGAAGATTTCGAAGAAATTTCTAGAAATGTAGTTGAGTATTTAGGGCGACTACCGCTAGCTCTAGAAGTCCCTTGGAGGCTGGAGAATCTGAAAATTCTGAAGCTTAGTCATTCTCATTATCTGACACAGACCCCAAACTTTTCAAACTTGCCTAATCTTGAACAACTAGTCCTCTCTGATTGTCCAATGTTGTCTGAGGTTTCTCCTAGCATTGGAGATCTAAACAAAATTCTTCTAATAAATTTGGAAGATTGTATTAGCCTATGTAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGTTGTTTAAAGATTGAAAAGTTGGACGAGGATTTAGAACAGATGGAATCTTTAACCACCTTGATTGCGAATAACACTGCAATTACAAGAGTGCCATTCTCAATTGTAAGGTCAAAAAGCATTGCATATATATCCTTGTGCGGCTATGAAGGATTTTCACGTTATGTGTTTCCATCTATCATCTTGTCTTGGATGTCGCCAACAAATAATCTACCATCCAAATTTCAAACAGCTCCTATCACGTCATCTCTTGTTCCTTTAGATTTACCATATAGTAGTTCCCACGAAATATCATCGATTTCTAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTGGAGTGTAGCTCAGAACTTCAACTTTCTCATGATGCAGCAGTAATTTTGGATGCCTTGTATTCCACTAATAATAAGGAATTCGAATCGGCTGCATCTACATCAAAAGTATCAGGAAATTCCTTGAAATCTATTTTCATTcaattgagaataaattgcCAAGTTGCCAATATTTTGAAAGAGAGAATTGTACAGAATATGACTGTCGATGGATATGGTGGTGTTTTGCTCCCCAGTGATAGTTATCCATATTGGTTAACCTTCAATTGCAAAGGTTCTTCTGTACTCTTTGAAGTCCCTCAATTGGAAGGGCGTAACTTAAAGACTATAATGTGCATTGTCTATACTTCAACTCCAGAAAACATAGTATCTGATGGCCTTAAGAACGTGATGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGTATGAGGCATTAGTTTCGTTTGAAGAAGAGGAAGGGTATAGATTAGTATCGAGTATAGAACATGGTAATAAAAtggaggttgttgttgtttttgagaaGAATTTCATTGTGAAGAAGACAACAATTTATCTCATATATGATGAACCAATTGGCAAAACCATGGAGCAAAGTGATACACCACTAGATAAGAATGTCATTGTTTGTAGTGATGGTGAAGATGAATGCGCGTTGGTGGATTGA 1389 0.36 MDESESTELFSWHEFKQERPREDFEEISRNVVEYLGRLPLALEVPWRLENLKILKLSHSHYLTQTPNFSNLPNLEQLVLSDCPMLSEVSPSIGDLNKILLINLEDCISLCSLPRSIYKLKSLKTLILSGCLKIEKLDEDLEQMESLTTLIANNTAITRVPFSIVRSKSIAYISLCGYEGFSRYVFPSIILSWMSPTNNLPSKFQTAPITSSLVPLDLPYSSSHEISSISKYLPSLRSLWVECSSELQLSHDAAVILDALYSTNNKEFESAASTSKVSGNSLKSIFIQLRINCQVANILKERIVQNMTVDGYGGVLLPSDSYPYWLTFNCKGSSVLFEVPQLEGRNLKTIMCIVYTSTPENIVSDGLKNVMVKNYTKATIQLYKYEALVSFEEEEGYRLVSSIEHGNKMEVVVVFEKNFIVKKTTIYLIYDEPIGKTMEQSDTPLDKNVIVCSDGEDECALVD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02250 462 SUPERFAMILY L domain-like 46 242 - -
Tsu06g02250 462 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 53 429 - -
Tsu06g02250 462 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 44 IPR044974 GO:0006952
Tsu06g02250 462 Gene3D Ribonuclease Inhibitor 23 300 IPR032675 -
Tsu06g02250 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 50 IPR027417 -
Tsu06g02250 462 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 429 IPR044974 GO:0006952
Tsu06g02250 462 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02250 Tsu-Chr6 28362712 28365483 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02250 48 163 WRKY Transcription Factor Family AT4G12020 37.931 2.07e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02250 - - cam:101494533 653.284