Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02247 ATGAGGGTGGAGAGACGTGTAAGAGAACGCGAGGTCAATGTCATTCTTCCGTACATTTTCCATATCCATCATCATCGTCATTCCTTTGACTCCTTTCTATTCTTCAAATCTACTAACAAACATTTGTTCGTTACTACTCCGTATAAAGTACAGTACCAGATGGACGAGCACGAAGAAGGAAGAGCCACGAAGTACGACAAACTCTCCTCTTTCGTTTTTAAACTCGATATGCATTGCGATGGATGCACccaaaagataaaaaatgtCGTTTGTAAACACGACGGTGTGTATTGCGTTAACATCGATAGGCCTAGTAATAGACCGACGGTTACTGGATACGTGGACCCTGACAAGGTGCGAGATAAACTGGAGGCTAAACTTAAGAGGAAGGTTGCGCTTTCCACGGAAAATAAACTTTATGACGTGTTTTTAAGTTTTAGAGGGAAAGATACTCGTGCATCATTCACTTCACTTCAAAATGCTGGAATTAGCGTTTTTAGGGACGATGATTCGCTTCAAAGAGGAGATCAAATCTCAACATCTTTACTTTTTGCAATCGAAGAGTCTCGGATTTCGGTGATTGTTTTTTCAAGGAATTATGCAGATTCGAGATGGTGTTTGAATGAGTTGGTAAAGATAATGGAGTGTCAGAGAACCATGGGGCAAATAGTTGTGCCAGTGTTCTATGATGTAGATCCCTTTGAAGTACGTCACCAAAAAGGCGTGTTTGGTAAAGCATTTCAGAATCTCTCGAATAGAATTTCAAAGAAGGAAGAAGAGTCCATTTCAAAGGAGGAAGACACCCTTTTAAAGGAGGAGGAAGACGAGTCCATTTCAAAGGAGGAAGACACCCTTTCAAAGGAGGAGGAAGATGAGTCCCTTTCAAAGGAGGAGGAAGATGAGTCCCTTTCAAAGGTGGTGGAAGACGAAGGAGTCACAGCATTAGATCCATTGGATGCTTCAAGGGAGGTCTTAATTTTCTTAGATGACCCTATGATTGATTATGTCCGAGCTACAATGAATTTGAAAGAGAGCAACTGCAGGTTGTCACTTAGAGGCAGTGCGAGTGAAGTTGTCCTGCAGGTTCGGTTGCTGGAAGCTGACTCAACAAGTTTTCAACAGTGGGACACTGAGGACCAGACATGGTTTTCAACTACTACTTTACAAGGTAACTACTTGTGGAACACGGCTATAATGCTTAGGTTTTTTTTAAGCTTCAGGCGGTTGCAAGGGAAAGgtgtgttgtttttttatgtCTTCATTGGTGCAGCAACTATtgtttatttgaaaatattcatgttTAGTCTCTATGATGAATTGCAACTTGTTCAATCAAAGACTAAATTAGCAACCGGGGAGTCAAAAATGATTAGTGATGCCATTGAGTCAATAAGGAAAGTTATTGTTGATTGTTCCCTTCAATGTTGTTCTGGGAAGGAACCAATTTTTGGAAGTGAATATGGAATAGATCAGTGGGCTTCTTGCATTGCATATGCGCATGTTCTTTGTTATAATTCAAGGATCTCAAAGCATGAAAACTATAAGTTCTCAAAGATAATAGGAAGGTTAGGAGACATGTTGATCACTACCTTTGAATTCCAAGAATGGGTCAACTTTTGCAATCAGAGTTGTCTTCAGAAATTTCTGGAAATATCCAGTTCAATATTGAAATCTTCAAAGAACAATGCCCAAGTTATGGTTTCAAAGGAGGTACCAAGGTCACTAGTTTCAATCATAATTTGGAAGGATAAGAACGAAATGGAGGCAATCAAGGACATTGTTAAAAATGTTACGCGTTTGCTTGACAAGACGGACTTGTTCATTGTTGATAATCCAGTAGGAGTTGAATCTCGAGTACGAGATATGATCCAACGGTTAAACATTCAACAATCAaatgatattatattattaggGATGTGGGGCATGGGAGGAGTCGGTAAAACTACCATCGCAAAAGCTATTTACAATAAAATTGGCCGCAACTTTGAAGGAAGGAGCTTCCTTACAAATATTAGGGAAGTTTGGGAGCAAATATCTGGGCAAGTTTATTTACAAGAACAACTTCTCTTTGATATCtgcaaagaaacaaaaactaaGATACAGAGCATTGAGTCGGGAAAAAGTTTATTAAAGGATAGACTCCTCCATAAAAGAGTACTTCTTGTACTTGATGATGTGAGTACAATAGACCAACTAAATGCTTTATGTGGAAGTCATAAATGGCTTGGTTCCGGAAGTAGAATAATCATCACAACTAGAGATATGCACATACTTAGAGGATTTAGAGTTGACCAAGTGtacaaaatgaaagaaatgaaTAAAAGTGAGTCAATTGAACTTTTTAGTTGGCATGCATTCAAGAAATCAAGTCCAAAAGAAGATTTTCTTGAAATTTCTCGAAATGTAGTTGAGTATTCTGGGGGACTGCCTCTAGCTCTGGAAGTCCTTGGATCATATTTGTTTGATAGGGGAATAGCAGAGTGGAAATGTGTATTGGAGAAACTCAAAAGAATTCCTAATGATGAAgtacaaaaaaagttaaaaataagcTATGATGGTTTAAATGATGACACCTTGAAAGAAATATTCCTTGACgtttcttgtttctttattgGGATGGATCGAAATGATGTTATACATATCTTAAATGGATGTGGACTTTTTGCAGAAATCGGAATAAGTGTACTTGTTGAGCGAAGTCTTGTTACTGTTGATGATAATAACACGCTTGGAATGCATGATTTGTTGCGTGATATGGGAAGAGAAATCATTCGCAAGAAATCACCAAAGGAGCCTGAGGAGCGCACTAGGTTGTGGTTTGATAAAGATGTGCTTGATGTATTATTAGAGGAGACCGGAACAAAAACTGTTGAGGGATTGACTTTGAAGTTGGCAAGAGAAAATGCAAAATGCATTAGTACTAAAGCATTCAAGAAGATGACAAGACTCAGATTGCTTCAACTTGATGGTATACAACTTGATggagattttaaatatctttcaAAAAATCTGAGATGGCTTTATTGGAATGAATTTCCTTTAAAATGTATTCCTTCAAGCTTTTATCAAGGAAATTTAGTTTCCATTGAGTTAGAAAACAGCAATATCAAACTTCTTTGGAAAGAGACTCAGAGGTTGGAGAAACTGAAAATCCTTAATCTTAGTCATTCTCGTTATCTGACGCAGACTCCAGATTTTTCAAGCTTACCTAATCTTGAACAACTAGTACTCAGTGATTGTCCAAGGTTGTCAGAGGTTTCAAATAGTATTGGACTTCTCAATAAAGTTCTTCTGATAAATTTGGAAGACTGCATTGGCCTTCAAAGCCTTCCAAGAAGTATATATAAGTTGAAATCTCTTAAAACTCTCATTCTTTCTGGTTGTTTAAAGATTGACAAGTTGGAGGAGGACTTAGAACAAATGGAATCTTTAACCACTCTACTTGCAAATAACACTGCAATAACAAGAGTGCCTTTTTCAGTAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGTGGATATGAAGGATTTTCATGTGATGTGTTTCCATCTATCATTATGTCTTGGATGTCCGCAACAAGTAGTCTCTATTCCCCGTTTCAAACACTGGCTTCCGTATCATCTCTTGTGTCTTTAGATGtcccaaaaaaaatttcacatgaACTATCATCTTTTTCTAAACACCTTCCAAGGCTTCGAAGTCTTTGGGTGGATTGCAACTCCGAAGATCAACTTTCTCTTgacacaaaaataattttggatgCTTTATTTGGCACAGTTTCTAAGGATTTGGAATCAACTGCAGCTAAGTCACACATATCAAATATGGATACTTCTACATTAATTCAATGTTGCAGTCAAGTGCAAGTTTCAGGATCAAAACTTTCCTTGAAGTCTCTTTTAATTCAAATGGGAATGAATTGCCAAGTCACGAATGTTCTCAAAGAGAAAATTTTACAGAACATGGATGTCAATGGGACTGATGGCTGTTTCCTCCCCGGTGATAGTTATCCAAATTGGTTAACTTTTAGTTCTGAAGGTTGTTCTGTAACTTTTCAAGTCCCTCAAGTGAAAGGGCATAACTTGAAGACACTGATGTGCATTGTCTATACTTCAACTCCAGATAACACAACCTCAGATGGCCTTAAAAACGTGTTGGTGAAAAATTACACAAAGGCCACCATTCAGCTTTATAAGAGAGAGGCATTAGTCTCCTTTGAAGATGAGGAGTGGAAGAGGGTAGTATCAAGTATAGAACCCGGTAACAGAGCTGAGGTCATTTTTGTTTTCGAGAATGATTGCATTGTGGAGAAGACAACAGTTTATCTGGTATATGATGATAAGCCAATTGGCGAGGAATTGGAGCTATATCATGTACCAGATCTGAATGTCATTTCTTGTAGTGACGATGAAAATGAACGCGCTTCCAAGAGGATCTCTACTCAAGAGGAGCCTACTGATGATTTCAATGAgaatagaaagaagaaaaatcgaGTGGAACGAAAATGGTTGGGTGAACATCAATTCTTATGGTGCCTGCAAGGCTTTGTATTGGCAACAATTGTTTTCTATTTGTGGCTGAAATTTCTAGATTAG 4599 0.3649 MRVERRVREREVNVILPYIFHIHHHRHSFDSFLFFKSTNKHLFVTTPYKVQYQMDEHEEGRATKYDKLSSFVFKLDMHCDGCTQKIKNVVCKHDGVYCVNIDRPSNRPTVTGYVDPDKVRDKLEAKLKRKVALSTENKLYDVFLSFRGKDTRASFTSLQNAGISVFRDDDSLQRGDQISTSLLFAIEESRISVIVFSRNYADSRWCLNELVKIMECQRTMGQIVVPVFYDVDPFEVRHQKGVFGKAFQNLSNRISKKEEESISKEEDTLLKEEEDESISKEEDTLSKEEEDESLSKEEEDESLSKVVEDEGVTALDPLDASREVLIFLDDPMIDYVRATMNLKESNCRLSLRGSASEVVLQVRLLEADSTSFQQWDTEDQTWFSTTTLQGNYLWNTAIMLRFFLSFRRLQGKGVLFFYVFIGAATIVYLKIFMFSLYDELQLVQSKTKLATGESKMISDAIESIRKVIVDCSLQCCSGKEPIFGSEYGIDQWASCIAYAHVLCYNSRISKHENYKFSKIIGRLGDMLITTFEFQEWVNFCNQSCLQKFLEISSSILKSSKNNAQVMVSKEVPRSLVSIIIWKDKNEMEAIKDIVKNVTRLLDKTDLFIVDNPVGVESRVRDMIQRLNIQQSNDIILLGMWGMGGVGKTTIAKAIYNKIGRNFEGRSFLTNIREVWEQISGQVYLQEQLLFDICKETKTKIQSIESGKSLLKDRLLHKRVLLVLDDVSTIDQLNALCGSHKWLGSGSRIIITTRDMHILRGFRVDQVYKMKEMNKSESIELFSWHAFKKSSPKEDFLEISRNVVEYSGGLPLALEVLGSYLFDRGIAEWKCVLEKLKRIPNDEVQKKLKISYDGLNDDTLKEIFLDVSCFFIGMDRNDVIHILNGCGLFAEIGISVLVERSLVTVDDNNTLGMHDLLRDMGREIIRKKSPKEPEERTRLWFDKDVLDVLLEETGTKTVEGLTLKLARENAKCISTKAFKKMTRLRLLQLDGIQLDGDFKYLSKNLRWLYWNEFPLKCIPSSFYQGNLVSIELENSNIKLLWKETQRLEKLKILNLSHSRYLTQTPDFSSLPNLEQLVLSDCPRLSEVSNSIGLLNKVLLINLEDCIGLQSLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLTTLLANNTAITRVPFSVVRSKSIGYISLCGYEGFSCDVFPSIIMSWMSATSSLYSPFQTLASVSSLVSLDVPKKISHELSSFSKHLPRLRSLWVDCNSEDQLSLDTKIILDALFGTVSKDLESTAAKSHISNMDTSTLIQCCSQVQVSGSKLSLKSLLIQMGMNCQVTNVLKEKILQNMDVNGTDGCFLPGDSYPNWLTFSSEGCSVTFQVPQVKGHNLKTLMCIVYTSTPDNTTSDGLKNVLVKNYTKATIQLYKREALVSFEDEEWKRVVSSIEPGNRAEVIFVFENDCIVEKTTVYLVYDDKPIGEELELYHVPDLNVISCSDDENERASKRISTQEEPTDDFNENRKKKNRVERKWLGEHQFLWCLQGFVLATIVFYLWLKFLD 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02247 1532 SUPERFAMILY "Winged helix" DNA-binding domain 841 948 IPR036390 -
Tsu06g02247 1532 Coils Coil 1131 1151 - -
Tsu06g02247 1532 MobiDBLite consensus disorder prediction 269 297 - -
Tsu06g02247 1532 SMART till_3 139 331 IPR000157 GO:0007165
Tsu06g02247 1532 Pfam TIR domain 140 258 IPR000157 GO:0007165
Tsu06g02247 1532 Coils Coil 247 267 - -
Tsu06g02247 1532 Coils Coil 271 291 - -
Tsu06g02247 1532 SUPERFAMILY HMA, heavy metal-associated domain 72 125 IPR036163 GO:0046872
Tsu06g02247 1532 Gene3D - 66 132 - -
Tsu06g02247 1532 PRINTS Disease resistance protein signature 1044 1060 - -
Tsu06g02247 1532 PRINTS Disease resistance protein signature 806 820 - -
Tsu06g02247 1532 PRINTS Disease resistance protein signature 713 727 - -
Tsu06g02247 1532 PRINTS Disease resistance protein signature 636 651 - -
Tsu06g02247 1532 Gene3D Ribonuclease Inhibitor 944 1358 IPR032675 -
Tsu06g02247 1532 ProSiteProfiles Heavy-metal-associated domain profile. 77 124 IPR006121 GO:0046872
Tsu06g02247 1532 Pfam Heavy-metal-associated domain 73 128 IPR006121 GO:0046872
Tsu06g02247 1532 ProSiteProfiles TIR domain profile. 138 282 IPR000157 GO:0007165
Tsu06g02247 1532 MobiDBLite consensus disorder prediction 257 305 - -
Tsu06g02247 1532 Gene3D - 595 766 IPR027417 -
Tsu06g02247 1532 Pfam NB-ARC domain 616 851 IPR002182 GO:0043531
Tsu06g02247 1532 Gene3D - 133 310 IPR035897 -
Tsu06g02247 1532 SUPERFAMILY L domain-like 962 1245 - -
Tsu06g02247 1532 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 154 1445 - -
Tsu06g02247 1532 CDD HMA 77 125 IPR006121 GO:0046872
Tsu06g02247 1532 SUPERFAMILY Toll/Interleukin receptor TIR domain 134 251 IPR035897 -
Tsu06g02247 1532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 154 1445 IPR044974 GO:0006952
Tsu06g02247 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 865 IPR027417 -
Tsu06g02247 1532 Gene3D - 771 855 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02247 Tsu-Chr6 28334561 28349730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02247 583 1161 WRKY Transcription Factor Family AT4G12020 33.054 1.06e-76 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02247 - - cam:101494533 1306.97