Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02246 ATGAATTGTGACGAAGTAATATCTGCACAAATGAAAACGAAGAAAACGAATAGAGaaATATTGACGAGATGGAGGGAAGCAACAAAGATCCTTCatgcTTCACGTAGGTTTAGGTATTGGATCCATGATGTGTTTTTAAGTTTTCGAGGGGAAGACACTCGTGCATCTTTCACTTCACATCTCCACGCTTCTCTTCAAAACGATGGAATCAATGTTTTCATGGACAATCATTCGCTTCAAAGAGGAAATAGCATTTCAACATCACTGCTGCAAGCAATTGAAAATTCTCAAATTGCTGTTATTGTTTTCTCCGTAAATTATGCTGACTCACGATGGTGTTTGGATGAGTTGGTGAAAATAATGGAGTGTCACAGAACCAGAGGGCAGATAGTGCTGCCAGTGTTCTACGATGTTGATCCCTCAGAGGTGCGTCACCAAACTGGTGAGTTTGGAAAAGCTTTTCAAAGTCTAATGAATAGACTTTCAAATAAGAAAGGAATTCATCATAGGGTTGGAAAAGCAGTTCGATATCTTTTGAACAGTTTGTCAATCTACAAGGAAGAGTCGCCGGATCCGGTGCTGAGATGGAGTTGGAGAGCAGCACTTCGTGAGGCAGCAGCGCTTGCAGGGTTTGTAGTGCTAAATGCAAGGAACGAAAGTGAGGCTATGAAGGATATTGTTGAAAAAGTTACACAGTTGCTAGACAAGACAGACTTGTTTGTTGCTAATAATCCAGTGGGAGTTGAAACTAGAGTACAAGATATGATTCAATTGTTAGACATCCAACATTCAAATGATGTGCTGCTACTAGGAATGTGGGGCATGGGAGGAATCGGGAAAACCACTATTGCAAAAGCCATATACAATAAAATTGGCCGCAATTTTGGAGCTAGGAGTTTCCTAGCGAATATTAGGGAGGTTTGGGATAAAAATGATGGACAAGTGTCTTTACAACAACAACTTCTCTTTGATATTTGCAAGGAAACGACAACCAAGATACAAAGCATTGAGGCTGGAAAAATTACATTAAAGGATAGACTATGTGGTAAAAGAATACTTCTTATACTCGATGACGTGAGTACATTGGACCAATTGAATGCTTTGTGTGGAAGCCGACAATGGTTTGGTTCAGGGAGTAGAATAATTATCACAACTAGAGATATGCATATACTTAGAGGGAATAGAGTTGACCAAATATACACAATGAAAGAAATGAATGAAAGTGAATCAATTGAACTTTTTAGTTGGAACGCATTCAAGCAAGAAAGGCCTAGAGAAGATTTTGTAGGAATTTCTAGAAATGTAGTTGAAAAAATTGTCGAGTACTCTGGGGGATTGCCATTAGCTCTGGAAGTCCTTGGTTCCTATTTGTTTGAAAGGGAAGTAACAGACTGGATGTGTGTATTggagaaaatcaaaataattccTAATGATCAAGTACAACGGAAGTTAAAAATAAGCTATGATGGTTTAAATGAAGATACCGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTCATACAGATATTAAATGGATGTGGACTTTTTGCAGAAACCGGAATAAGTGTACTTGTTGAGCGAAGTCTTGTAACTGTTGATGATAATAACACGCTTGGAATGCATGATTTGTTACGAGATATGGGAAGAGAAATCGTTCGTGAAAAATCACCGAAGGAGCCTGAGGAGCGTAGTAGGTTATGGTTTCCCGAAGATGTGCTTGGTGTTTTAATTGAACAAACTGGAACAAAAGCAGTTGAGGGACTAACTTTGAAGCTGCCAATAGCTAGTTCAAAATGTTTTAGTACTAAAGGATTTAAGAAGATGAAGAGACTCAGATTACTTCAACTTGCTGGAGTGCAACTTGATGGAGATTTGGAATATCTTTCAAGAAATCTAAGATGGCTGTCTTGGAATGGATTTCCTTTAACAAGCATACCTTCAAACTTTTATCAAGGAAATTTAGTTTCCATTGAATTAGAAAACAGCAATGTCAGACTTCTGTGGAGAGAGACCCaaAGGTTGGAGATGCTGAAAATCCTAAACCTTAGTCATTCTCATTATCTGACACAGACCCCTAACTTCTCAAATTTGCCTAATCTTGAAAAGCTGGTACTCACAGATTGTCCAAGGTTGTCCGAGGTTTCCAATAGTATTGGAGATCTCGAGAAAATTCTTTTGATCGATTTGGAAGACTGTATTAGCCTTCGTAGCCTTCCGAAAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCAATATTTCTGGGTGTTCAATGATTGACAAGTTAGAAGATGACTTGGAACAGATGGACTCCTTAACCAACCTGATTGCAACTAACACTGCAATAACAAAAGTTCCATTTTCAGTAGTAAGATCAAAAAGCATCGGATATATTTCTCTATGCGGTTATGAAGGATTCTCACATGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCGACAAATAATCTCCCATCCCAATTACAAACATGTACTACCACGGCATCTCTTGTTCCTTTAGATGTATCACATAGTAGTTCCTGCGAACTATCATCAATTTCCAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTGGAGTGCAGTTCAGAATTTCAACTTTCTCATGATGCAGCAATAATTTTGGATGCCTTATATGCCACATATTCTGCAGAATTGGAACCAATTGCAACTGCATCACAAGTAACAAGAAATTCCTTGAAATCTCTATTCATTCAAATGGGAGTTAATTGTCAAGTGGCTAATCTTCTAAAAGAGCAAATATTACAGAATATGACAGTCAAAGAGAGCGGTGATTGTGTGCTCCCCGGTGATAGTTATCCAGATTGGTTAAGCTTCAATTGTGATGGTTCTTCTATAATTTTTGAGGTCCCTCAAGTGGAAGGACATAACTTGAAGTCATTGATGTGCATTGCCTATTCTTCAACTCTGGATAACATAACATCAGATGGTCTTAAAAATGTGTTAGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAAAGATACATTAGCTTCCTTTGAAGACGAGGAGGGACAAAGAGTTGTATCAAGTATAGAACCCGGAAACAAAGTGgagattatttttgtttttgggaaTGGTTTTGTTGTGAAGAAAACAACAGTTTATCTCATATATGATGAACTGAATGGAGAAAAAATGGAACAATGTGAAGTACTAGAAGAAAATGCTATTGTTAGTGATGGTGATGAAAAGGAATGCAGTGTACGGGGGAGCTCACCGCAAGTGGAACTCATGGATGAAGAAATGGCGAAATGTCAAGAACAAGTAAAAAATGATATTGTGTTTAGtggtgatgataatgatgaaggCAGTGTCAGGACAAGCTCTCCGCAAGTGGAACTCGTGGATGAAAATGGTGGTGCTGCTAGTTGTTGGGGATTGATCAAATATAGTTTCAAACATTGGATTACAGATTTTGTGTGTAGATTAGTAGAGTGCAGGTGA 3522 0.3754 MNCDEVISAQMKTKKTNREILTRWREATKILHASRRFRYWIHDVFLSFRGEDTRASFTSHLHASLQNDGINVFMDNHSLQRGNSISTSLLQAIENSQIAVIVFSVNYADSRWCLDELVKIMECHRTRGQIVLPVFYDVDPSEVRHQTGEFGKAFQSLMNRLSNKKGIHHRVGKAVRYLLNSLSIYKEESPDPVLRWSWRAALREAAALAGFVVLNARNESEAMKDIVEKVTQLLDKTDLFVANNPVGVETRVQDMIQLLDIQHSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFGARSFLANIREVWDKNDGQVSLQQQLLFDICKETTTKIQSIEAGKITLKDRLCGKRILLILDDVSTLDQLNALCGSRQWFGSGSRIIITTRDMHILRGNRVDQIYTMKEMNESESIELFSWNAFKQERPREDFVGISRNVVEKIVEYSGGLPLALEVLGSYLFEREVTDWMCVLEKIKIIPNDQVQRKLKISYDGLNEDTEKEIFLDIACFFIGMDRNDVIQILNGCGLFAETGISVLVERSLVTVDDNNTLGMHDLLRDMGREIVREKSPKEPEERSRLWFPEDVLGVLIEQTGTKAVEGLTLKLPIASSKCFSTKGFKKMKRLRLLQLAGVQLDGDLEYLSRNLRWLSWNGFPLTSIPSNFYQGNLVSIELENSNVRLLWRETQRLEMLKILNLSHSHYLTQTPNFSNLPNLEKLVLTDCPRLSEVSNSIGDLEKILLIDLEDCISLRSLPKSIYKLKSLKTLNISGCSMIDKLEDDLEQMDSLTNLIATNTAITKVPFSVVRSKSIGYISLCGYEGFSHDVFPSIIWSWMSPTNNLPSQLQTCTTTASLVPLDVSHSSSCELSSISKYLPSLRSLWVECSSEFQLSHDAAIILDALYATYSAELEPIATASQVTRNSLKSLFIQMGVNCQVANLLKEQILQNMTVKESGDCVLPGDSYPDWLSFNCDGSSIIFEVPQVEGHNLKSLMCIAYSSTLDNITSDGLKNVLVKNYTKATIQLYKKDTLASFEDEEGQRVVSSIEPGNKVEIIFVFGNGFVVKKTTVYLIYDELNGEKMEQCEVLEENAIVSDGDEKECSVRGSSPQVELMDEEMAKCQEQVKNDIVFSGDDNDEGSVRTSSPQVELVDENGGAASCWGLIKYSFKHWITDFVCRLVECR 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02246 1173 Pfam NB-ARC domain 249 473 IPR002182 GO:0043531
Tsu06g02246 1173 SUPERFAMILY "Winged helix" DNA-binding domain 479 585 IPR036390 -
Tsu06g02246 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 503 IPR027417 -
Tsu06g02246 1173 Gene3D - 39 230 IPR035897 -
Tsu06g02246 1173 Pfam TIR domain 42 165 IPR000157 GO:0007165
Tsu06g02246 1173 Gene3D - 404 492 IPR042197 -
Tsu06g02246 1173 PRINTS Disease resistance protein signature 346 360 - -
Tsu06g02246 1173 PRINTS Disease resistance protein signature 443 457 - -
Tsu06g02246 1173 PRINTS Disease resistance protein signature 269 284 - -
Tsu06g02246 1173 PRINTS Disease resistance protein signature 752 768 - -
Tsu06g02246 1173 ProSiteProfiles TIR domain profile. 40 234 IPR000157 GO:0007165
Tsu06g02246 1173 SMART till_3 41 208 IPR000157 GO:0007165
Tsu06g02246 1173 SUPERFAMILY L domain-like 599 911 - -
Tsu06g02246 1173 Gene3D Ribonuclease Inhibitor 593 924 IPR032675 -
Tsu06g02246 1173 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 48 1063 - -
Tsu06g02246 1173 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 157 IPR035897 -
Tsu06g02246 1173 Gene3D - 231 399 IPR027417 -
Tsu06g02246 1173 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 1063 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02246 Tsu-Chr6 28281357 28331857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02246 23 798 WRKY Transcription Factor Family AT4G12020 30.827 2.85e-86 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02246 - - cam:101494533 1611.66