Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02241 atgtctaAAAAGGCTATGACATCAATGAAGGATGAAAATCAAGAATTGCAGAAGCAAATTGGATGTATCAGTGGATTTTTCCAGCTGTTTGATCGTCATAGGTTCATCACAAGCCACAACAATAGCAACAATAGTCACAATATACCAAATCAAGGGGGGGCAGGTAATAACATCAAAGAGGTGAATAATACAACACAAAAGGCAAAGGCAAAGAATGTAAAGGTAGCAAGAGAGAATCAACAATCCTCCACAGAATCATCATCAGGAATATCAATGTCTTCGTCGTCTTGTTCATCGAGCATGTCATCCCTCGAGTTTAACCGAACAATACAGATAGAACCACCATCAATAAGTCCAATGAAAGTCACAGATGACTCGAAATCAGAAGCAGAAATGAAGCAACTTGGCAACGAAAGACATCGGTCCCTTGATTTCCAAGATATTGTAAAAGACTCCATGCATATAGATTCACAAAGATTATCGGTGAAAACGCTGcctaaagaagaaaagaagggTCGAATCTTGAAACACATTGATTCTCCGCGGCCTATGACTGCTTGGGATTCACCAAGACTCTCATATGACGGGAGAGATGTACAAAGCACACTCAAATCTGCAACGAAGCACAAGGAACAACTCCCACGGTTTTCCTTGGACAGCAAGGAAAGGTCCATCAAAAGTTTCAACGAAGGAGCAAAAAATCGGAACCTTTTGAAGGGTCCACAGAGAGTGTGTGGAGGCTCTAACACAATGGTCAAGCAGATGGAAGAACCAGACACTTCTAAAAGACCATCAAGTGTTGTGGCAAAGTTGATGGGGCTAGAAGCATTCCCTGATTGGAGCGAAACTTGTGATATCTGCTACACCGACAAAGATGAGACCTTTGCAGGATCTAGAATGAGTGATGAATACATGCAACAGAAAGATTCGGAATTCTCGAGGACAATCAAAGGGACTACTTTGCTTCAATCTCGGAGGGATAGTTCAATCACAAATGTGACACAATCTTCAATAAAATCATCAAACCGATCCTTATCAGTTTATGGTGAAATTGAGAAAAGGATGGCGGATCTAGAGTTCAAAAAATCCGGAAAGGATCTTAGAGCCCTTAAACAGATTCTTGAAGCAATGCACAGATACAAAGAATCATTAGATACTACAAGTGACCAGGCTTCAAATTCTCCATATGACAATAGGAGCAATAGTAGTGTCAGTGAAAGCTTGAATTTACAAAGCCCGAGAACACGGCAGAAGAACCTAACATCTGTCACAGTTGAGAGATTGAATTCAACTCAGGGTAGTAAATCTCCGATTGTCATCGTGAAACCAACAAAGGTtgcaagaaaaacaaataattctTCCACAGAAATGTCAATTAATGTTAAACCGTTGGGTAGCAAGGTTTTGCGCAGCGATCCTACCAATGGAATGTTGGTTGACAAGCTTGGCAGGCAAACAGCAAAAGGTAGTCCGGCAATCAAACACGTCAAAGATCCTATTAGTCCACCTTTTCGTTCAGTGGATAAAAGCAATAAGACGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCCTCAAGTCATCATTGGAGAAAACAACACTAACTCCAGCATTATGGTAGAGACCAAGAGCCCGAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCCCCGCCAAGCAGCCCATCATCAGACATCAGCAATAACAGAAGACAGCAAAATAGGCCATCAATGGAATTGTCTTCCCCGAGAACACCATCTAGACAAAAAATCTCAACTTTGCAGGAAAGAAATGAAAAGGACTCGAGCAAGGAAAGCTTTATGGCTGAAACAATAGTTACTGCAGAACAACCTAGTCCTGTGTCCGTTCTTGATGCCGCATTCTATAGAGAAGATCCACCTTCTCCGGtaaaaaggaaaacaaacaTCTCAAAAGATTTAGATGAAGTTTTGAATACTTATGATACTAGTGAGGAGGACTCGGAAGACACAAAAGTCAACTTCAGCAATGGAACCAGTGATATTGACTTGATAACTCATAATTTAGTTCAAATTCTGCAACAATTTGAACACAGTGACGATGAAAGATTCACGAGTTTCAGTGACCACAAAGATCCTGACCACAAATATATATCAGAAATACTACTAGCATCGCGGCTGCTTGCCAGTCCAAGATCTAGCCAGGCATTGCATTCGTCAGGTTACCCGATTAACCCAATGTTGTTCCTCGCACTAGAGAAAATAAAGACAAACAAGATGCATGACAATATTGCTAATACGAACAATCACGAGAAAATGCAAAGAAAGCTCATCTTTGATGTCGTTAATGAAATGCTATTTCAAAAGCTAATATCGGAGAGTTCTTACAAGCCATATCAGCAAAAAGGAACAAAACCAGAAGGACAACATCTTTTGGATATGCTTTGCACAGAAATTGATAAGTTACaacgtaaaaataaaaatgtcagCGTGGCTAATGAGGACGAGTATTTGATAAGTGTCTTGTTAGATGATTTGGTGCAGAACCCGACAAATACAGAATGCTACAATGAGATACCAAATGTTGTGTTGGATATTGAAAGATTGATCTTCAAAGATCTGATAACTGAAATTGTGAGAACTGAGAAGTGA 2631 0.3907 MSKKAMTSMKDENQELQKQIGCISGFFQLFDRHRFITSHNNSNNSHNIPNQGGAGNNIKEVNNTTQKAKAKNVKVARENQQSSTESSSGISMSSSSCSSSMSSLEFNRTIQIEPPSISPMKVTDDSKSEAEMKQLGNERHRSLDFQDIVKDSMHIDSQRLSVKTLPKEEKKGRILKHIDSPRPMTAWDSPRLSYDGRDVQSTLKSATKHKEQLPRFSLDSKERSIKSFNEGAKNRNLLKGPQRVCGGSNTMVKQMEEPDTSKRPSSVVAKLMGLEAFPDWSETCDICYTDKDETFAGSRMSDEYMQQKDSEFSRTIKGTTLLQSRRDSSITNVTQSSIKSSNRSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMHRYKESLDTTSDQASNSPYDNRSNSSVSESLNLQSPRTRQKNLTSVTVERLNSTQGSKSPIVIVKPTKVARKTNNSSTEMSINVKPLGSKVLRSDPTNGMLVDKLGRQTAKGSPAIKHVKDPISPPFRSVDKSNKTRTSKLMQSSKVPQVIIGENNTNSSIMVETKSPRLQKKFGLERRSPPSSPSSDISNNRRQQNRPSMELSSPRTPSRQKISTLQERNEKDSSKESFMAETIVTAEQPSPVSVLDAAFYREDPPSPVKRKTNISKDLDEVLNTYDTSEEDSEDTKVNFSNGTSDIDLITHNLVQILQQFEHSDDERFTSFSDHKDPDHKYISEILLASRLLASPRSSQALHSSGYPINPMLFLALEKIKTNKMHDNIANTNNHEKMQRKLIFDVVNEMLFQKLISESSYKPYQQKGTKPEGQHLLDMLCTEIDKLQRKNKNVSVANEDEYLISVLLDDLVQNPTNTECYNEIPNVVLDIERLIFKDLITEIVRTEK 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02241 876 MobiDBLite consensus disorder prediction 506 543 - -
Tsu06g02241 876 PANTHER LONGIFOLIA PROTEIN 335 596 IPR033334 GO:0051513
Tsu06g02241 876 PANTHER LONGIFOLIA PROTEIN 595 875 - -
Tsu06g02241 876 MobiDBLite consensus disorder prediction 386 424 - -
Tsu06g02241 876 PANTHER LONGIFOLIA PROTEIN 1 335 - -
Tsu06g02241 876 PANTHER LONGIFOLIA PROTEIN 335 596 - -
Tsu06g02241 876 PANTHER LONGIFOLIA PROTEIN 1 335 IPR033334 GO:0051513
Tsu06g02241 876 PANTHER LONGIFOLIA PROTEIN 595 875 IPR033334 GO:0051513
Tsu06g02241 876 Pfam Domain of unknown function (DUF4378) 707 870 IPR025486 -
Tsu06g02241 876 MobiDBLite consensus disorder prediction 38 99 - -
Tsu06g02241 876 MobiDBLite consensus disorder prediction 384 424 - -
Tsu06g02241 876 MobiDBLite consensus disorder prediction 557 592 - -
Tsu06g02241 876 MobiDBLite consensus disorder prediction 486 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02241 Tsu-Chr6 28208940 28214297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02241 1 875 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.324 1.04e-62 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02241 - - cam:101511926 1253.04