Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02239 ATGGCACAATCATCATCAACGTCTCTCAAAGTTCATCAAATTCTTTCAATATCACCACAAAATGAAACCTCACCAACCACTTTCCCTTTCACTTTCTTTGACACCCTATGGCTAAAACTTCCACCGGTTGAACGTCTCTTCTTCTATGAACACACAAATTTATCAACCACTCTTTTCTTTGAATCCATTCTTCCAAATCTCAAACACTCTCTTGAACTCACTCTCCAACACTTTCTCCTTCTTGTTGGTAACATAACATGGCCACAAGATTTATCTTACCCTATTATCAACTATGTCCCTAGTGATTCTATCTCTTTCATTGTAGCTGAATCCAATGAAAATTTCAACCTTGTATGTTCCAATCTTTGTGAATCTGAAAAAAGAAATCCCTTTGTCCCAAAGTTGAATATTTCAGATGAAAAAGCATCACTTATTTCATTACAAGTCACTTTTTTTCCTAACCATGGTTTTTGTATTGGTATAACTACACACCATGCAGGTGTTGATGGAAAATCTTCAACTTTGTTTATGAAAGCTTGGTCTTATTTTTGTTCTAACCTTGAAAAAAAATCACCCTCTTTATCTTTACCTCAAAATCTAACACCTTTTTTTGATAGGTCCATTATCAAAGACCCTTTAGGAGTAAATGAACTTTATGCAAAAGGTTGGTCAAATTTAGGTGgagaaataaataatagaaGCTTGAAGGTTTGGGAAACAATTAGTGCAACAAAAGGTGAAGCAATTAAAGGTCATTTTGAATTTTCATCTTTGGATATTCAAAAACTCAAGAAATATGCACAATCCAAActtgaaaataaaagaatttcaACTTTTGCTATTACTTGTGCTTATTTGTTAGCATGTGCTGTTAAAGTTGACCAACCAAATTCCAATAAGGTAGCTTTTGTTTTTAGTGTTGATTGTAGGACACGTTTGGATCCACCAATTAGTGaaaattattttggtaattGTGTTGTGTCACAATTGGTTGTAAGTCAAACTGAGGCATTATTGAAAGATGATGGATTTATTAATGCTCTTAAAGAGATATTAAATGCATTGAAGTTGGAAAATGGGGTGTTACATGAGGTAGAAATTTGGATGTTAAAGATACAATCAATTATGAGTGAGACTAATAGGTTGTTTTCTATTGCTGGCTCACCTAGGTTTGAGGTTTatagttttgattttggatGGGGAAAGCCTAAGAAAGTTGATGTTACTTCTATTGATAAAACGGGTGCTTTTTCTCTTAGTGAAAGTAGGAATAATGATGGTGGAGTTGAGATTGGTTTGGCTTTGAATAAGCAACAAATGGAGGAATTTGCTCAAGTTTTTGTTCAAGGACTTGAATCTTTGGAATAG 1368 0.3268 MAQSSSTSLKVHQILSISPQNETSPTTFPFTFFDTLWLKLPPVERLFFYEHTNLSTTLFFESILPNLKHSLELTLQHFLLLVGNITWPQDLSYPIINYVPSDSISFIVAESNENFNLVCSNLCESEKRNPFVPKLNISDEKASLISLQVTFFPNHGFCIGITTHHAGVDGKSSTLFMKAWSYFCSNLEKKSPSLSLPQNLTPFFDRSIIKDPLGVNELYAKGWSNLGGEINNRSLKVWETISATKGEAIKGHFEFSSLDIQKLKKYAQSKLENKRISTFAITCAYLLACAVKVDQPNSNKVAFVFSVDCRTRLDPPISENYFGNCVVSQLVVSQTEALLKDDGFINALKEILNALKLENGVLHEVEIWMLKIQSIMSETNRLFSIAGSPRFEVYSFDFGWGKPKKVDVTSIDKTGAFSLSESRNNDGGVEIGLALNKQQMEEFAQVFVQGLESLE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02239 455 Gene3D - 247 454 IPR023213 -
Tsu06g02239 455 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 454 - -
Tsu06g02239 455 SUPERFAMILY CoA-dependent acyltransferases 274 454 - -
Tsu06g02239 455 Gene3D - 9 234 IPR023213 -
Tsu06g02239 455 Pfam Transferase family 16 445 - -
Tsu06g02239 455 PANTHER - 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02239 Tsu-Chr6 28183450 28185097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02239 46 445 Monolignol Biosynthesis Gene Families AT5G48930 22.090 3.98e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02239 - - gmx:100785084 528.865