Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02233 ATGGCTTCATTTAGTGATGAGAATAGAAAAGGAAGTGGCAAGAAATTGAAAGTTCATTTTGATCTTCCTGAGGATGAAGATCATCTTAAAAAAAAGcattcaagttcttcaatttcatCACAAGATGATTCAGATGATAACATAGAAAATTTTGAAGAATCTAATAATGTTGGTTATGGTTCACCTGTTTGGAGTTTTCAAAGTGGAACAGTGACACAATCTCCTCCACCACCTCATTTGATGAGccctaaccctaaccctaattcTGGATATGATCCAAATAGAATACCTTCTTCTGCTTTTGCTCCTAAACCTACAAGTCCTATGGATTGGAGTGTTCAATCAAATGAATCATTGTTTAGTTTACATTTGGGGAATTATAGTTTCTCAAGAGACCAATTTTTCGCATACAAATATTCCGGTGAACTGCCAAAAACTAATGATAGTGCCGGGGTGTCTATGTCATTGCCACGGGTTCAAGAGGTAAAACATAGTAACGATGAAAATATAGTTGAGATGGAGAGACGTTCTATATCGTCAGATTCCTCTCATGATTCAACCGATAAATCAGATAAAACAAAGAATTTAACTTTGGAGAATGAACGTATACAAACGTCAAATGAAAATGTAGATTTAGTTTTGAAGGATGATGATCACGATAAAACCAAAACATCGGTAAATGTAGAGAAAACTACATTGGACAAAGCTCAAGATGATCATAGTAAAGCAACGGCGGTTCCTAATAAAGAACCTACTAATTATGCGGCCACTGTCTCGTACCGTTCGGTCGAAAGCGATATGAGCAGCAATCACTCATTTCAATTTCCTATaTTGACACCGGAAGGATTAAGAACAAGTTCAGCAACAATAGAGTCAGAAAAGCATGAGAATAATATTGAAAagcaacaccatcatcaacaacaacaaatgcaACAATCAGAGAAACCAATGAAGCCTCCTAGTCCTAAATCTGAAACAACACCAAAACATAGTTCTAGaaCTTCTCAATACGACGCCGTTTCACTCAATTCCGATAAATCAACACTTCTCCGTCTCAAAACCTCACTCTCCGACCCCACCGGAGTTCTCTCTTCATGGAGCCCTTCCTCCAGCCACTGTTCCTGGTATGGTGTTCACTGTGATTCAAACTCCCGTGTTGTTGCTGTCAATATCACCGGTGCCGGAGATGGTAACCGGAGTTCACATCCGTGTTCTGATTTTGGTATGTTTCCGCTTTATGGATTTGGAATTAGGAGAGGCTGTTTGGGTTTTAAGGGCTCTTTGTTTGGAAAGTTTCCATCTTTGATCAGTGAGTTAACTGAGCTTAGGGTTTTGTCTTTACCTTTCAATGGGTTGGAGGGTTCAATTCCTCAAGAGATTTGGAGTATGGAGAAACTTGAAGTTCTTGATTTAGAAGGTAATTTCATTAGTGGTTATTTACCTTTTAAATTTCAAGGTTTGAGAAATTTGAGGGTTTTGAATTTGGGGTTTAATAAGATTGTTGGAGTTGTACCTAATGTTTTATCTTCTCTTGAGAGTTTGGAGGTTTTGAATTTAGCTTCAAATGATTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGCTTAGAGGGGTGTATTTGTCTTTTAATCAATTTAGTGGAGTTATTCCGGAGGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCGGCTAACTCTTTGGTTGAAGACATTCCGAAGAGTTTGGGGAATTGTAGTGGGTTGAGGACACTTTTGTTATATTCAAATTTGTTGGAAGAGGGTATTCCTGTCGAATTTGGGAACCTTAAGAATCTTGAGGTGTTGGATGTTTCGAGGAATACGCTTAGTGGTTCTATTCCTCGCGAGCTTGGGAATTGTAAGGAGCTTTCTGTTGTTGTGCTTTCTAACCTTTTTGATCCAGTTGGGGATGTTGGGTTTGCTACTTTGAATGATGAGTTGAATTATTTTGAAGGTTCAATGCCTGAGGAAGTTGTGTTGCTTCCTAAGCTTACGATTTTGTGGGCTCCCATGGTGAATTTGGAAGGAAGTTTTCCTAGGAGTTGGGGTGCTTGTGGTAATTTGGAGATGGTTAATTTGGCTCAGAATTTCTTCACCGGAGAGTTTCCAAACCAACTTGGTTTCTGTAAGAAGCTTCATTTTCTTGATCTAAGCTCAAACAATCTTACTGGGCAGCTTTCTGAGGAACTTCATGTTCCATGTATGACTGTGTTTGATGTTAGTGTGAACAAGTTATCTGGTTCAGTTCCTGATTTCTCCAACAATAGTTGTTCTCCCTTTCCTTTATGGAATGGGAACCTGTTTGAAACCGATGATGTTACGACTCCTTATGCATCATATTTCTCATCGAAAGTTCGTGAGAGAACACTTTTCACATCATTAGGGGGAGCTGGCCTTTCAGTCTTTCACAGCTTTGAGCAAAACAATTTCACTGGCATTCAGTCACTGCCAATAGCACATGACAGGATGGAGGAAAAGAGTAGTTACACACTTCTTGTCGGAGAGAACAAGCTCACAGGACCGTTTCCTACATATTTGTTTCAGAAATGCATTGGATTAGATGCATTGCTTTTGAATATCTCAGGACCAATTCCCTCTACTTTAGGGGATTCGGTCTCTCTTGTTTCCCTGAATCTCAGTAGAAACCGGTTACAAGGTCCGATTCCCACCCACCTCGGACAGATGAATGATTTgaagtttctttctttggctGATAATCACTTGAGCGGTTCAATTCCTCCCGGCCTAGGAAACTTGTACTCTTTACAAGTCTTGGACCTTTCTACAAACTCTCTTACCGGTGAGATTCCAAATTTTATAGAGAACATGAGAAATCTGACTGATGTTTTGCTCAATAACAACAATCTTTCTGGACACATTCCTGCTGGTTTGGCAAATGTCACGACACTCTCTGTATTCAACGTGTCTTTCAATAACTTATCTGGATACTTGCCATCAAATAGTAGCCTGATCAAATGCAGCAGTGCTGTTGGGAATCCGTTTCTAAGTTCCTGCCGTGGAGTTTCTCTGACTGTGCCATCAGCAAATCAACAAGGGCAGATTGATGAAAATTCTCCTATTGCATCACAACCTACTGGAAAAAATGATAACGGTTTCAGCGCTATTGAAATAGCATCTATAACTTCTGCTTGTGCCATTGTTTCAGTTCTTATAGCCCTCATTGTTCTGTTCTTCTTCACGCGAAGGTGGAAGCCGAATTCCAGGGTTGGTGGTTCTGCCAAAAGAGAAGTTACAGTGTTTACTGATATCGGCGTTCCATTGACATTTGAAAATGTTGTCCAAGCCACAGGAAATTTCAATGCAAGCAACTGTATAGGGAGTGGAGGATTCGGCGCAACTTATAAGGCAGAGATATCACAAGGAATCTTGGTGGCAGTGAAACGTCTTTCAGTAGGACGTTTTCAAGGTGTTCAACAATTCCATGCAGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAACCTTGTAACTTTGATTGGCTACCATGCTTGTGAGACAGAGATGTTTCTCATATACAATTATCTTTCGGGCGGTAATCTTGAAAAGTTCATCCAGGAGCGATCCACAAGGGCTGTAGATTGGAAAATTCTTCACAAGATTGCATTGGACATAGCGCGTGCGCTTTCCTATCTGCATGATCAATGTGTACCGCGTGTTCTTCATCGCGATGTCAAGCCTAGTAATATCTTGCTGGACGATGATTTCAATGCTTATCTGTCTGACTTCGGACTCGCCAGACTTTTGGGAACTTCAGAAACACATGCTACAACCGGTGTTGCAGGAACATTTGGTTATGTTGCTCCTGAATACGCCATGACATGTCGTGTTTCCGACAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTCGAGTTGCTATCTGATAAGAAGGCATTGGACCCTTCGTTTTCTTCTTATGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTATTGAGGGAAGGAAGAGCAAAGGAGTTTTTCGCTGCAGGTTTATGGGACGCCGGACCAGAAAATGATTTGGTAGAGGTTCTTCACTTAGCAGTTGTTTGTACGGTTGACTCACTATCAACGAGACCTACAATGAAACAGGTTGTGAAAAGGCTTAAGCAACTTCAACCTCCATCATGCTAG 4185 0.3978 MASFSDENRKGSGKKLKVHFDLPEDEDHLKKKHSSSSISSQDDSDDNIENFEESNNVGYGSPVWSFQSGTVTQSPPPPHLMSPNPNPNSGYDPNRIPSSAFAPKPTSPMDWSVQSNESLFSLHLGNYSFSRDQFFAYKYSGELPKTNDSAGVSMSLPRVQEVKHSNDENIVEMERRSISSDSSHDSTDKSDKTKNLTLENERIQTSNENVDLVLKDDDHDKTKTSVNVEKTTLDKAQDDHSKATAVPNKEPTNYAATVSYRSVESDMSSNHSFQFPILTPEGLRTSSATIESEKHENNIEKQHHHQQQQMQQSEKPMKPPSPKSETTPKHSSRTSQYDAVSLNSDKSTLLRLKTSLSDPTGVLSSWSPSSSHCSWYGVHCDSNSRVVAVNITGAGDGNRSSHPCSDFGMFPLYGFGIRRGCLGFKGSLFGKFPSLISELTELRVLSLPFNGLEGSIPQEIWSMEKLEVLDLEGNFISGYLPFKFQGLRNLRVLNLGFNKIVGVVPNVLSSLESLEVLNLASNDLNGSVPGFVGKLRGVYLSFNQFSGVIPEEIGENCGKLEHLDLSANSLVEDIPKSLGNCSGLRTLLLYSNLLEEGIPVEFGNLKNLEVLDVSRNTLSGSIPRELGNCKELSVVVLSNLFDPVGDVGFATLNDELNYFEGSMPEEVVLLPKLTILWAPMVNLEGSFPRSWGACGNLEMVNLAQNFFTGEFPNQLGFCKKLHFLDLSSNNLTGQLSEELHVPCMTVFDVSVNKLSGSVPDFSNNSCSPFPLWNGNLFETDDVTTPYASYFSSKVRERTLFTSLGGAGLSVFHSFEQNNFTGIQSLPIAHDRMEEKSSYTLLVGENKLTGPFPTYLFQKCIGLDALLLNISGPIPSTLGDSVSLVSLNLSRNRLQGPIPTHLGQMNDLKFLSLADNHLSGSIPPGLGNLYSLQVLDLSTNSLTGEIPNFIENMRNLTDVLLNNNNLSGHIPAGLANVTTLSVFNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANQQGQIDENSPIASQPTGKNDNGFSAIEIASITSACAIVSVLIALIVLFFFTRRWKPNSRVGGSAKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLSGGNLEKFIQERSTRAVDWKILHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLREGRAKEFFAAGLWDAGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02233 1394 Gene3D Ribonuclease Inhibitor 341 533 IPR032675 -
Tsu06g02233 1394 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 339 1393 - -
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 1 112 - -
Tsu06g02233 1394 Pfam Leucine Rich Repeat 930 951 IPR001611 GO:0005515
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 8 39 - -
Tsu06g02233 1394 CDD STKc_IRAK 1121 1389 - -
Tsu06g02233 1394 Gene3D Phosphorylase Kinase; domain 1 1079 1190 - -
Tsu06g02233 1394 PRINTS Leucine-rich repeat signature 721 734 - -
Tsu06g02233 1394 PRINTS Leucine-rich repeat signature 928 941 - -
Tsu06g02233 1394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1235 1247 IPR008271 GO:0004672|GO:0006468
Tsu06g02233 1394 Gene3D Ribonuclease Inhibitor 534 641 IPR032675 -
Tsu06g02233 1394 Gene3D Ribonuclease Inhibitor 795 1034 IPR032675 -
Tsu06g02233 1394 Gene3D Ribonuclease Inhibitor 650 784 IPR032675 -
Tsu06g02233 1394 SUPERFAMILY Protein kinase-like (PK-like) 1096 1386 IPR011009 -
Tsu06g02233 1394 SMART LRR_typ_2 487 510 IPR003591 -
Tsu06g02233 1394 SMART LRR_typ_2 511 533 IPR003591 -
Tsu06g02233 1394 SMART LRR_typ_2 605 629 IPR003591 -
Tsu06g02233 1394 SMART LRR_typ_2 952 975 IPR003591 -
Tsu06g02233 1394 SMART LRR_typ_2 904 928 IPR003591 -
Tsu06g02233 1394 SMART LRR_typ_2 463 486 IPR003591 -
Tsu06g02233 1394 SMART LRR_typ_2 557 581 IPR003591 -
Tsu06g02233 1394 SUPERFAMILY L domain-like 837 1013 - -
Tsu06g02233 1394 Pfam Protein kinase domain 1118 1316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02233 1394 Gene3D Transferase(Phosphotransferase) domain 1 1191 1391 - -
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 146 250 - -
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 161 198 - -
Tsu06g02233 1394 ProSitePatterns Protein kinases ATP-binding region signature. 1121 1143 IPR017441 GO:0005524
Tsu06g02233 1394 SMART serkin_6 1115 1393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02233 1394 ProSiteProfiles Protein kinase domain profile. 1115 1389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 211 245 - -
Tsu06g02233 1394 SUPERFAMILY RNI-like 430 766 - -
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 51 75 - -
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 304 340 - -
Tsu06g02233 1394 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Tsu06g02233 1394 Pfam Leucine rich repeat N-terminal domain 343 381 IPR013210 -
Tsu06g02233 1394 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 339 1393 - -
Tsu06g02233 1394 MobiDBLite consensus disorder prediction 292 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02233 Tsu-Chr6 28136695 28143152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02233 340 1394 Receptor kinase-like Gene Family AT3G02130 61.649 0.0 1288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Tsu06g02233 Pkinase 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02233 - - gmx:100819882 1632.08