Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02208 ATGGTAGACTATGAAGAATCTGCAGATGTTGATGTTGACTTGAATGAAGTTTGTTCCTCTAATGGTCATACATCTGATGATGAGGATAACACCTATTCAGTATCCAGTGGCCATGAAAGTTCAGATGATGGCGATGTATCTGGTCATGAccatgatggtgatgatgatgctgGCAATGCCCATGAGTTTGCTGATGATCCAGTTATACGTGAAACAACGGTACGTATTAATTCGATGACTTCTGATGAAATTCGTGCTAAGGATTTCGGTAGTATTGAAGAAGCTTATGATTTTTATTATCAGTACGGTAGATGTAAAGGTTTTTCCGTTAGGAAAAGtgatgagaagaagaaaaaaatgccTGATGGTAGTAAAATAACAGTAAGTAAGCAGTTTGTTTGCAGTAGACAAGGTGTAAGAAATCAGAAACACATAGGTAGGTTAAATAGGTTAAGAGACCACAAACGAATTACACGTACTAAGTGCTTAGCTAGGTTTCGTGTGACCTACAAAGGCAAAAAGGGTATATTTGTAGTGTCTATTTTTGAAGAGACTCATAACCATGAGTTAACCCCGGCTAGGTTTGTGCACTTACACCCTGTTTATCGTAAGATTTCTGAAGCTGATAGAGCTCAGATTGATGGTCTGCAATCACATGGAATAAGAACTTGTCATATTATGGGCTACATGGTAGCTCAGAAGGGTAGATATGCTGATGTAGGGTTTACAAAGAAAGATCTTTACAATTATTTCGATAAAAAAATGCGTGATCTTATTAAAGATGGTGATGTTGCCGCTTCCCTAAATTATCTTAATGTATAA 822 0.3504 MVDYEESADVDVDLNEVCSSNGHTSDDEDNTYSVSSGHESSDDGDVSGHDHDGDDDAGNAHEFADDPVIRETTVRINSMTSDEIRAKDFGSIEEAYDFYYQYGRCKGFSVRKSDEKKKKMPDGSKITVSKQFVCSRQGVRNQKHIGRLNRLRDHKRITRTKCLARFRVTYKGKKGIFVVSIFEETHNHELTPARFVHLHPVYRKISEADRAQIDGLQSHGIRTCHIMGYMVAQKGRYADVGFTKKDLYNYFDKKMRDLIKDGDVAASLNYLNV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02208 273 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 204 - -
Tsu06g02208 273 MobiDBLite consensus disorder prediction 17 41 - -
Tsu06g02208 273 Pfam FAR1 DNA-binding domain 97 191 IPR004330 -
Tsu06g02208 273 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 39 204 - -
Tsu06g02208 273 MobiDBLite consensus disorder prediction 42 69 - -
Tsu06g02208 273 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02208 Tsu-Chr6 27781896 27782717 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g02208 FAR1 1.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02208 - - ccaj:109792835 247.669